[DOC]: Fill in built-in coordinates list #120
1 changed files with 148 additions and 2 deletions
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docs/builtin.rst
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docs/builtin.rst
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@ -315,12 +315,158 @@ Planned
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Coordinates
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Coordinates
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-----------
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-----------
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..
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Provide a list of the Coordinates that are implemented or planned.
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Version added: The Junifer version in which the parcellation was added.
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Available
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Available
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~~~~~~~~~
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~~~~~~~~~
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.. list-table::
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:widths: auto
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:header-rows: 1
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* - Name
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- Keys
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- Version added
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- Publication
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* - Cognitive action control
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- ``CogAC``
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- 0.0.1
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- | Cieslik, E.C., Mueller, V.I., Eickhoff, C.R., Langner, R., Eickhoff, S.B.
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| Three key regions for supervisory attentional control: Evidence from neuroimaging
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| meta-analyses.
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| Neuroscience & Biobehavioral Reviews, Volume 48, Pages 22-34 (2015).
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| https://doi.org/10.1016/j.neubiorev.2014.11.003.
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* - Cognitive action regulation
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- ``CogAR``
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- 0.0.1
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- | Langner, R., Leiberg, S., Hoffstaedter, F., Eickhoff, S.B.
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| Towards a human self-regulation system: Common and distinct neural signatures
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| of emotional and behavioural control.
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| Neuroscience & Biobehavioral Reviews, Volume 90, Pages 400-410 (2018).
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| https://doi.org/10.1016/j.neubiorev.2018.04.022.
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* - Default mode network
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- ``DMNBuckner``
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- 0.0.1
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- | Van Dijk, K.R., Hedden, T., Venkataraman, A. et al.
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| Intrinsic functional connectivity as a tool for human connectomics:
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| theory, properties, and optimization.
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| Journal of neurophysiology, Volume 103(1), Pages 297-321 (2010).
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| https://doi.org/10.1152/jn.00783.2009
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| Buckner, R.L., Andrews‐Hanna, J.R., & Schacter, D.L.
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| The brain's default network: anatomy, function, and relevance to disease.
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| Annals of the New York Academy of Sciences, Volume 1124(1), Pages 1-38 (2008).
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| https://doi.org/10.1196/annals.1440.011
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* - Missing formal name
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- ``eMDN``
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- 0.0.1
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- Missing publication details
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* - Empathic processing
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- ``Empathy``
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- 0.0.1
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- | Bzdok, D., Schilbach, L., Vogeley, K. et al.
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| Parsing the neural correlates of moral cognition: ALE meta-analysis on morality,
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| theory of mind, and empathy.
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| Brain Structure and Function, Volume 217(4), Pages 783-796 (2012).
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| https://doi.org/10.1007/s00429-012-0380-y
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* - Extended social-affective default
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- ``eSAD``
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- 0.0.1
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- | Amft, M., Bzdok, D., Laird, A.R. et al.
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| Definition and characterization of an extended social-affective default network.
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| Brain structure & function, Volume 220, Pages 1031–1049 (2015).
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| https://doi.org/10.1007/s00429-013-0698-0
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* - Extended multiple-demand network
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- ``extMDN``
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- 0.0.1
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- | Camilleri, J.A., Müller, V.I., Fox, P. et al.
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| Definition and characterization of an extended multiple-demand network.
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| NeuroImage, Volume 165, Pages 138-147 (2018).
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| https://doi.org/10.1016/j.neuroimage.2017.10.020.
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* - Motor execution
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- ``Motor``
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- 0.0.1
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- | Witt, S.T., Laird, A.R., Meyerand, M.E.
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| Functional neuroimaging correlates of finger-tapping task variations:
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| An ALE meta-analysis,
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| NeuroImage, Volume 42(1), Pages 343-356 (2008).
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| https://doi.org/10.1016/j.neuroimage.2008.04.025.
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* - Multitasking
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- ``MultiTask``
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- 0.0.1
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- | Worringer, B., Langner, R., Koch, I. et al.
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| Common and distinct neural correlates of dual-tasking and task-switching:
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| a meta-analytic review and a neuro-cognitive processing model of human multitasking.
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| Brain structure & function, Volume 224(5), Pages 1845–1869 (2019).
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| https://doi.org/10.1007/s00429-019-01870-4
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* - Physiological stress
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- ``PhysioStress``
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- 0.0.1
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- | Kogler, L., Müller, V.I., Chang, A. et al.
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| Psychosocial versus physiological stress — Meta-analyses on deactivations and
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| activations of the neural correlates of stress reactions.
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| NeuroImage, Volume 119, Pages 235-251 (2015).
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| https://doi.org/10.1016/j.neuroimage.2015.06.059.
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* - Reward-related decision making
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- ``Rew``
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- 0.0.1
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- | Liu, X., Hairston, J., Schrier, M., Fan, J.
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| Common and distinct networks underlying reward valence and processing stages:
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| A meta-analysis of functional neuroimaging studies.
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| Neuroscience & Biobehavioral Reviews, Volume 35(5), Pages 1219-1236 (2011).
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| https://doi.org/10.1016/j.neubiorev.2010.12.012.
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* - Missing formal name
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- ``Somatosensory``
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- 0.0.1
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- Missing publication details
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* - Theory-of-mind cognition
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- ``ToM``
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- 0.0.1
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- | Bzdok, D., Schilbach, L., Vogeley, K. et al.
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| Parsing the neural correlates of moral cognition: ALE meta-analysis on morality,
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| theory of mind, and empathy.
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| Brain Structure and Function, Volume 217(4), Pages 783-796 (2012).
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| https://doi.org/10.1007/s00429-012-0380-y
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* - Vigilant attention
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- ``VigAtt``
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- 0.0.1
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- | Langner, R., & Eickhoff, S.B.
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| Sustaining attention to simple tasks: a meta-analytic review of the neural
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| mechanisms of vigilant attention.
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| Psychological bulletin, Volume 139 4, Pages 870-900 (2013).
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| https://doi.org/10.1037/a0030694
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* - Working memory
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- ``WM``
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- 0.0.1
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- | Rottschy, C., Langner, R., Dogan, I. et al.
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| Modelling neural correlates of working memory: A coordinate-based meta-analysis.
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| NeuroImage, Volume 60, Pages 830-846 (2012).
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| https://doi.org/10.1016/j.neuroimage.2011.11.050.
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Planned
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Planned
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~~~~~~~
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~~~~~~~
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.. list-table::
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:widths: auto
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:header-rows: 1
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* - Name
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- Publication
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* - Emotional scene and face processing (EmoSF)
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- | Sabatinelli, D., Fortune, E.E., Li, Q. et al.
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| Emotional perception: Meta-analyses of face and natural scene processing.
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| NeuroImage, Volume 54(3), Pages 2524-2533 (2011).
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| https://doi.org/10.1016/j.neuroimage.2010.10.011.
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* - Perceptuo-motor network
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- | Heckner, M.K., Cieslik, E.C., Eickhoff, S.B. et al.
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| The Aging Brain and Executive Functions Revisited: Implications from Meta-analytic
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| and Functional-Connectivity Evidence.
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| Journal of Cognitive Neuroscience, Volume 33(9), Pages 1716–1752 (2021).
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| https://doi.org/10.1162/jocn_a_01616
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Masks
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Masks
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-----
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