ds005479_cat12.9/sub-21/mri/mori_sub-21_T1w.csv at base

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Felix Hoffstaedter 28ba30be16 [DATALAD RUNCMD] Compute sub-21

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.9_r2665.simg sh -e -u -x -c '\n        mkdir -p {outputs[0]} || true         && cp {inputs[0]} {outputs[0]}         && /singularity -b code/cat_standalone_segment_enigma_subdir_rp.m {outputs[0]}/*.nii.gz         && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.*         && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.*         && rm -f {outputs[0]}/*.nii*         && gzip {outputs[0]}/*/*.nii         '",
 "dsid": "3827f929-f218-4211-9e52-9e59f1dcc1a2",
 "exit": 0,
 "extra_inputs": [
  "code/pipeline/cat12.9_r2665.simg"
 ],
 "inputs": [
  "inputs/ds005479/sub-21/anat/sub-21_T1w.nii.gz"
 ],
 "outputs": [
  "sub-21"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^

2025-05-23 03:12:19 +02:00

5.3 KiB (Stored with Git Annex)

Raw Permalink Blame History

1	ROIid	ROIabbr	ROIname	Vgm	Vwm
2	1	lSupParLo	Left Superior Parietal Lobule	1	0
3	2	rSupParLo	Right Superior Parietal Lobule	1	0
4	3	lCinGy	Left Cingulate Gyrus	1	0
5	4	rCinGy	Right Cingulate Gyrus	1	0
6	5	lSupFroGy	Left Superior Frontal Gyrus	1	0
7	6	rSupFroGy	Right Superior Frontal Gyrus	1	0
8	7	lMidFroGy	Left Middle Frontal Gyrus	1	0
9	8	rMidFroGy	Right Middle Frontal Gyrus	1	0
10	9	lFroGy	Left Frontal Gyrus	1	0
11	10	rFroGy	Right Frontal Gyrus	1	0
12	11	lPrcGy	Left Precentral Gyrus	1	0
13	12	rPrcGy	Right Precentral Gyrus	1	0
14	13	lPoCGy	Left Postcentral Gyrus	1	0
15	14	rPoCGy	Right Postcentral Gyrus	1	0
16	15	lAngGy	Left Angular Gyrus	1	0
17	16	rAngGy	Right Angular Gyrus	1	0
18	17	lCun	Left Cuneus	1	0
19	18	rCun	Right Cuneus	1	0
20	19	lLinGy	Left Lingual Gyrus	1	0
21	20	rLinGy	Right Lingual Gyrus	1	0
22	21	lFusGy	Left Fusiform Gyrus	1	0
23	22	rFusGy	Right Fusiform Gyrus	1	0
24	23	lParHipGy	Left Parahippocampus Gyrus	1	0
25	24	rParHipGy	Right Parahippocampus Gyrus	1	0
26	25	lSupOccGy	Left Superior Occipital Gyrus	1	0
27	26	rSupOccGy	Right Superior Occipital Gyrus	1	0
28	27	lOccGy	Left Occipital Gyrus	1	0
29	28	rOccGy	Right Occipital Gyrus	1	0
30	29	lMidOccGy	Left Middle Occipital Gyrus	1	0
31	30	rMidOccGy	Right Middle Occipital Gyrus	1	0
32	31	lEnt	Left Entorhinal Area	1	0
33	32	rEnt	Right Entorhinal Area	1	0
34	33	lSupTemGy	Left Superior Temporal Gyrus	1	0
35	34	rSupTemGy	Right Superior Temporal Gyrus	1	0
36	35	lTemGy	Left Temporal Gyrus	1	0
37	36	rTemGy	Right Temporal Gyrus	1	0
38	37	lMidTemGy	Left Middle Temporal Gyrus	1	0
39	38	rMidTemGy	Right Middle Temporal Gyrus	1	0
40	39	lLatOrbGy	Left Lateral Orbital Gyrus	1	0
41	40	rLatOrbGy	Right Lateral Orbital Gyrus	1	0
42	41	lMidOrbGy	Left Middle Orbital Gyrus	1	0
43	42	rMidOrbGy	Right Middle Orbital Gyrus	1	0
44	43	lSupMarGy	Left Supramarginal Gyrus	1	0
45	44	rSupMarGy	Right Supramarginal Gyrus	1	0
46	45	lRecGy	Left Gyrus Rectus	1	0
47	46	rRecGy	Right Gyrus Rectus	1	0
48	47	lIns	Left Insula	1	0
49	48	rIns	Right Insula	1	0
50	49	lAmy	Left Amygdala	1	0
51	50	rAmy	Right Amygdala	1	0
52	51	lHip	Left Hippocampus	1	0
53	52	rHip	Right Hippocampus	1	0
54	53	lCbe	Left Cerebellum	1	1
55	54	rCbe	Right Cerebellum	1	1
56	55	lCST	Left corticospinal_tract	0	1
57	56	rCST	Right corticospinal_tract	0	1
58	57	lCbePed	Left Cerebellar Peduncle	0	1
59	58	rCbePed	Right Cerebellar Peduncle	0	1
60	59	lMedLem	Left Medial Lemniscus	0	1
61	60	rMedLem	Right Medial Lemniscus	0	1
62	61	lSupCbePed	Left Superior Cerebellar Peduncle	0	1
63	62	rSupCbePed	Right Superior Cerebellar Peduncle	0	1
64	63	lCbrPed	Left Cerebral Peduncle	0	1
65	64	rCbrPed	Right Cerebral Peduncle	0	1
66	65	lAntCapLIC	Left Anterior Capsule Limb of Internal	0	1
67	66	rAntCapLIC	Right Anterior Capsule Limb of Internal	0	1
68	67	lPosCapLIC	Left Posterior Capsule Limb of Internal	0	1
69	68	rPosCapLIC	Right Posterior Capsule Limb of Internal	0	1
70	69	lPosThR	Left Posterior Thalamic Radiation	0	1
71	70	rPosThR	Right Posterior Thalamic Radiation	0	1
72	71	lAntCR	Left Anterior Corona Radiata	0	1
73	72	rAntCR	Right Anterior Corona Radiata	0	1
74	73	lSupCR	Left Superior Corona Radiata	0	1
75	74	rSupCR	Right Superior Corona Radiata	0	1
76	75	lPosCR	Left Posterior Corona Radiata	0	1
77	76	rPosCR	Right Posterior Corona Radiata	0	1
78	77	lCin+CinGy	Left Cingulate and Cingulum Gyrus	0	1
79	78	rCin+CinGy	Right Cingulate and Cingulum Gyrus	0	1
80	79	lCin+Hip	Left Cingulum and Hippocampus	1	1
81	80	rCin+Hip	Right Cingulum and Hippocampus	1	1
82	81	lForStrTer	Left Fornix Stria Terminalis	0	1
83	82	rForStrTer	Right Fornix Stria Terminalis	0	1
84	83	lSupLonLon	Left Superior Longitudinal Longitudinal	0	1
85	84	rSupLonLon	Right Superior Longitudinal Longitudinal	0	1
86	85	lSupOcc	Left Superior Occipital	0	1
87	86	rSupOcc	Right Superior Occipital	0	1
88	87	lOcc	Left Occipital	0	1
89	88	rOcc	Right Occipital	0	1
90	89	lSagStr	Left Sagital Stratum	0	1
91	90	rSagStr	Right Sagital Stratum	0	1
92	91	lCapExt	Left Capsule External	0	1
93	92	rCapExt	Right Capsule External	0	1
94	93	lUNC	Left Uncinate	0	1
95	94	rUNC	Right Uncinate	0	1
96	95	lPCT	Left Pontine Crossing Tract	0	1
97	96	rPCT	Right Pontine Crossing Tract	0	1
98	97	lMidCbePed	Left Middle Cerebellar Peduncle	0	1
99	98	rMidCbePed	Right Middle Cerebellar Peduncle	0	1
100	99	lBodForCol	Left (Body) Fornix Column	0	1
101	100	rBodForCol	Right (Body) Fornix Column	0	1
102	101	lCCGen	Left Corpus Callosum (Genu)	0	1
103	102	rCCGen	Right Corpus Callosum (Genu)	0	1
104	103	lCCBod	Left Corpus Callosum (Body)	0	1
105	104	rCCBod	Right Corpus Callosum (Body)	0	1
106	105	lCC	Left Corpus Callosum	0	1
107	106	rCC	Right Corpus Callosum	0	1
108	107	lCapRetLenINC	Left Capsule Retrolenticular_part_of_internal_capsule	0	1
109	108	rCapRetLenINC	Right Capsule Retrolenticular_part_of_internal_capsule	0	1
110	109	lRedNuc	Left Red-Nucleus	0	1
111	110	rRedNuc	Right Red-Nucleus	0	1
112	111	lSubNig	Left Substancia-Nigra	0	1
113	112	rSubNig	Right Substancia-Nigra	0	1
114	113	lTap	Left Tapatum	0	1
115	114	rTap	Right Tapatum	0	1
116	115	lCauNuc	Left Caudate Nucleus	1	0
117	116	rCauNuc	Right Caudate Nucleus	1	0
118	117	lPut	Left Putamen	1	0
119	118	rPut	Right Putamen	1	0
120	119	lTha	Left Thalamus	1	0
121	120	rTha	Right Thalamus	1	0
122	121	lGloPal	Left Globus Pallidus	1	0
123	122	rGloPal	Right Globus Pallidus	1	0
124	123	lMBR	Left Midbrain	0	1
125	124	rMBR	Right Midbrain	0	1
126	125	lPNS	Left Pons	0	1
127	126	rPNS	Right Pons	0	1
128	127	lMDA	Left Medulla	0	1
129	128	rMDA	Right Medulla	0	1

5.3 KiB (Stored with Git Annex) Raw Permalink Blame History

5.3 KiB (Stored with Git Annex)

Raw Permalink Blame History