Felix Hoffstaedter
28ba30be16
=== Do not change lines below ===
{
"chain": [],
"cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.9_r2665.simg sh -e -u -x -c '\n mkdir -p {outputs[0]} || true && cp {inputs[0]} {outputs[0]} && /singularity -b code/cat_standalone_segment_enigma_subdir_rp.m {outputs[0]}/*.nii.gz && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.* && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.* && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.* && rm -f {outputs[0]}/*.nii* && gzip {outputs[0]}/*/*.nii '",
"dsid": "3827f929-f218-4211-9e52-9e59f1dcc1a2",
"exit": 0,
"extra_inputs": [
"code/pipeline/cat12.9_r2665.simg"
],
"inputs": [
"inputs/ds005479/sub-21/anat/sub-21_T1w.nii.gz"
],
"outputs": [
"sub-21"
],
"pwd": "."
}
^^^ Do not change lines above ^^^
2.3 KiB
(Stored with Git Annex)
2.3 KiB
(Stored with Git Annex)
| 1 | ROIid | ROIabbr | ROIname | Vgm | Vwm | Vcsf | ROIbase |
|---|---|---|---|---|---|---|---|
| 2 | 21 | lSupFroG | Left Superior Frontal Gyrus | 1 | 1 | 0 | |
| 3 | 22 | rSupFroG | Right Superior Frontal Gyrus | 1 | 1 | 0 | |
| 4 | 23 | lMidFroG | Left Middle Frontal Gyrus | 1 | 1 | 0 | |
| 5 | 24 | rMidFroG | Right Middle Frontal Gyrus | 1 | 1 | 0 | |
| 6 | 25 | lInfFroG | Left Inferior Frontal Gyrus | 1 | 1 | 0 | |
| 7 | 26 | rInfFroG | Right Inferior Frontal Gyrus | 1 | 1 | 0 | |
| 8 | 27 | lPrcG | Left Precentral Gyrus | 1 | 1 | 0 | |
| 9 | 28 | rPrcG | Right Precentral Gyrus | 1 | 1 | 0 | |
| 10 | 29 | lMidOrbG | Left Middle Orbitofrontal Gyrus | 1 | 1 | 0 | |
| 11 | 30 | rMidOrbG | Right Middle Orbitofrontal Gyrus | 1 | 1 | 0 | |
| 12 | 31 | lLatOrbG | Left Lateral Orbitofrontal Gyrus | 1 | 1 | 0 | |
| 13 | 32 | rLatOrbG | Right Lateral Orbitofrontal Gyrus | 1 | 1 | 0 | |
| 14 | 33 | lRecG | Left Gyrus Rectus | 1 | 1 | 0 | |
| 15 | 34 | rRecG | Right Gyrus Rectus | 1 | 1 | 0 | |
| 16 | 41 | lPoCG | Left Postcentral Gyrus | 1 | 1 | 0 | |
| 17 | 42 | rPoCG | Right Postcentral Gyrus | 1 | 1 | 0 | |
| 18 | 43 | lSupParG | Left Superior Parietal Gyrus | 1 | 1 | 0 | |
| 19 | 44 | rSupParG | Right Superior Parietal Gyrus | 1 | 1 | 0 | |
| 20 | 45 | lSupMarG | Left Supramarginal Gyrus | 1 | 1 | 0 | |
| 21 | 46 | rSupMarG | Right Supramarginal Gyrus | 1 | 1 | 0 | |
| 22 | 47 | lAngG | Left Angular Gyrus | 1 | 1 | 0 | |
| 23 | 48 | rAngG | Right Angular Gyrus | 1 | 1 | 0 | |
| 24 | 49 | lPCu | Left Precuneus | 1 | 1 | 0 | |
| 25 | 50 | rPCu | Right Precuneus | 1 | 1 | 0 | |
| 26 | 61 | lSupOccG | Left Superior Occipital Gyrus | 1 | 1 | 0 | |
| 27 | 62 | rSupOccG | Right Superior Occipital Gyrus | 1 | 1 | 0 | |
| 28 | 63 | lMidOccG | Left Middle Occipital Gyrus | 1 | 1 | 0 | |
| 29 | 64 | rMidOccG | Right Middle Occipital Gyrus | 1 | 1 | 0 | |
| 30 | 65 | lInfOccG | Left Inferior Occipital Gyrus | 1 | 1 | 0 | |
| 31 | 66 | rInfOccG | Right Inferior Occipital Gyrus | 1 | 1 | 0 | |
| 32 | 67 | lCun | Left Cuneus | 1 | 1 | 0 | |
| 33 | 68 | rCun | Right Cuneus | 1 | 1 | 0 | |
| 34 | 81 | lSupTemG | Left Superior Temporal Gyrus | 1 | 1 | 0 | |
| 35 | 82 | rSupTemG | Right Superior Temporal Gyrus | 1 | 1 | 0 | |
| 36 | 83 | lMidTemG | Left Middle Temporal Gyrus | 1 | 1 | 0 | |
| 37 | 84 | rMidTemG | Right Middle Temporal Gyrus | 1 | 1 | 0 | |
| 38 | 85 | lInfTemG | Left Inferior Temporal Gyrus | 1 | 1 | 0 | |
| 39 | 86 | rInfTemG | Right Inferior Temporal Gyrus | 1 | 1 | 0 | |
| 40 | 87 | lParHipG | Left Parahippocampal Gyrus | 1 | 1 | 0 | |
| 41 | 88 | rParHipG | Right Parahippocampal Gyrus | 1 | 1 | 0 | |
| 42 | 89 | lLinG | Left Lingual Gyrus | 1 | 1 | 0 | |
| 43 | 90 | rLinG | Right Lingual Gyrus | 1 | 1 | 0 | |
| 44 | 91 | lFusG | Left Fusiform Gyrus | 1 | 1 | 0 | |
| 45 | 92 | rFusG | Right Fusiform Gyrus | 1 | 1 | 0 | |
| 46 | 101 | lIns | Left Insula | 1 | 1 | 0 | |
| 47 | 102 | rIns | Right Insula | 1 | 1 | 0 | |
| 48 | 121 | lCinG | Left Cingulate Gyrus | 1 | 1 | 0 | |
| 49 | 122 | rCinG | Right Cingulate Gyrus | 1 | 1 | 0 | |
| 50 | 161 | lCau | Left Caudate | 1 | 0 | 0 | |
| 51 | 162 | rCau | Right Caudate | 1 | 0 | 0 | |
| 52 | 163 | lPut | Left Putamen | 1 | 0 | 0 | |
| 53 | 164 | rPut | Right Putamen | 1 | 0 | 0 | |
| 54 | 165 | lHip | Left Hippocampus | 1 | 0 | 0 | |
| 55 | 166 | rHip | Right Hippocampus | 1 | 0 | 0 | |
| 56 | 181 | bCBeL | Bothside Cerebellar Lobe | 1 | 1 | 0 | |
| 57 | 182 | bBst | Bothside Brainstem | 0 | 1 | 0 |