Felix Hoffstaedter
28ba30be16
=== Do not change lines below ===
{
"chain": [],
"cmd": "singularity exec -B {pwd} --cleanenv code/pipeline/cat12.9_r2665.simg sh -e -u -x -c '\n mkdir -p {outputs[0]} || true && cp {inputs[0]} {outputs[0]} && /singularity -b code/cat_standalone_segment_enigma_subdir_rp.m {outputs[0]}/*.nii.gz && /singularity -b code/pipeline/batches/cat_standalone_batch-surfext.m {outputs[0]}/surf/lh.central.* && /singularity -b code/pipeline/batches/cat_standalone_batch-thick1.m {outputs[0]}/surf/lh.thickness.* && /singularity -b code/pipeline/batches/cat_standalone_batch-thick2.m {outputs[0]}/surf/lh.thickness.* && rm -f {outputs[0]}/*.nii* && gzip {outputs[0]}/*/*.nii '",
"dsid": "3827f929-f218-4211-9e52-9e59f1dcc1a2",
"exit": 0,
"extra_inputs": [
"code/pipeline/cat12.9_r2665.simg"
],
"inputs": [
"inputs/ds005479/sub-21/anat/sub-21_T1w.nii.gz"
],
"outputs": [
"sub-21"
],
"pwd": "."
}
^^^ Do not change lines above ^^^
8.4 KiB
(Stored with Git Annex)
8.4 KiB
(Stored with Git Annex)
| 1 | ROIid | ROIabbr | ROIname |
|---|---|---|---|
| 2 | 1 | lTE1.1 | Left Area TE 1.1 (HESCHL) |
| 3 | 2 | rTE1.1 | Right Area TE 1.1 (HESCHL) |
| 4 | 3 | l3b | Left Area 3b (PostCG) |
| 5 | 4 | r3b | Right Area 3b (PostCG) |
| 6 | 5 | lHC-Presubiculum | Left HC-Presubiculum (Hippocampus) |
| 7 | 6 | rHC-Presubiculum | Right HC-Presubiculum (Hippocampus) |
| 8 | 7 | lhOc4la | Left Area hOc4la (LOC) |
| 9 | 8 | rPF | Right Area PF (IPL) |
| 10 | 9 | lPF | Left Area PF (IPL) |
| 11 | 10 | rhOc4la | Right Area hOc4la (LOC) |
| 12 | 11 | lhOc2 | Left Area hOc2 (V2, 18) |
| 13 | 12 | rhOc2 | Right Area hOc2 (V2, 18) |
| 14 | 13 | l6d2 | Left Area 6d2 (PreCG) |
| 15 | 14 | r6d2 | Right Area 6d2 (PreCG) |
| 16 | 15 | lIg3 | Left Area Ig3 (Insula) |
| 17 | 16 | rIg3 | Right Area Ig3 (Insula) |
| 18 | 17 | lhOc4d | Left Area hOc4d (Cuneus) |
| 19 | 18 | rhOc4d | Right Area hOc4d (Cuneus) |
| 20 | 19 | lFo4 | Left Area Fo4 (OFC) |
| 21 | 20 | rFo4 | Right Area Fo4 (OFC) |
| 22 | 21 | lOP4 | Left Area OP4 (POperc) |
| 23 | 22 | rOP4 | Right Area OP4 (POperc) |
| 24 | 23 | l1 | Left Area 1 (PostCG) |
| 25 | 24 | r1 | Right Area 1 (PostCG) |
| 26 | 25 | lCh4 | Left Ch 4 (Basal Forebrain) |
| 27 | 26 | rCh4 | Right Ch 4 (Basal Forebrain) |
| 28 | 27 | lFrontal-I | Left Frontal-I (GapMap) |
| 29 | 28 | rFrontal-I | Right Frontal-I (GapMap) |
| 30 | 29 | lhPO1 | Left Area hPO1 (POS) |
| 31 | 30 | rhPO1 | Right Area hPO1 (POS) |
| 32 | 31 | lDorsalDentateNucleus | Left Dorsal Dentate Nucleus (Cerebellum) |
| 33 | 32 | rOP2 | Right Area OP2 (POperc) |
| 34 | 33 | lOP2 | Left Area OP2 (POperc) |
| 35 | 34 | rTE1.0 | Right Area TE 1.0 (HESCHL) |
| 36 | 35 | lTE1.0 | Left Area TE 1.0 (HESCHL) |
| 37 | 36 | rDorsalDentateNucleus | Right Dorsal Dentate Nucleus (Cerebellum) |
| 38 | 37 | lSTS2 | Left Area STS2 (STS) |
| 39 | 38 | rSTS2 | Right Area STS2 (STS) |
| 40 | 39 | lId3 | Left Area Id3 (Insula) |
| 41 | 40 | rId3 | Right Area Id3 (Insula) |
| 42 | 41 | l6mp | Left Area 6mp (SMA, mesial SFG) |
| 43 | 42 | r6mp | Right Area 6mp (SMA, mesial SFG) |
| 44 | 43 | lDG | Left DG (Hippocampus) |
| 45 | 44 | rDG | Right DG (Hippocampus) |
| 46 | 45 | lPGp | Left Area PGp (IPL) |
| 47 | 46 | rPGp | Right Area PGp (IPL) |
| 48 | 47 | lIg1 | Left Area Ig1 (Insula) |
| 49 | 48 | rIg1 | Right Area Ig1 (Insula) |
| 50 | 49 | l6ma | Left Area 6ma (preSMA, mesial SFG) |
| 51 | 50 | r6ma | Right Area 6ma (preSMA, mesial SFG) |
| 52 | 51 | lTI | Left Area TI (STG) |
| 53 | 52 | rTI | Right Area TI (STG) |
| 54 | 53 | lPFt | Left Area PFt (IPL) |
| 55 | 54 | rp24ab | Right Area p24ab (pACC) |
| 56 | 55 | lp24ab | Left Area p24ab (pACC) |
| 57 | 56 | rPFt | Right Area PFt (IPL) |
| 58 | 57 | lp24c | Left Area p24c (pACC) |
| 59 | 58 | rp24c | Right Area p24c (pACC) |
| 60 | 59 | lhOc3v | Left Area hOc3v (LingG) |
| 61 | 60 | rhOc3v | Right Area hOc3v (LingG) |
| 62 | 61 | lTE3 | Left Area TE 3 (STG) |
| 63 | 62 | rTE3 | Right Area TE 3 (STG) |
| 64 | 63 | lFrontal-to-Occipital | Left Frontal-to-Occipital (GapMap) |
| 65 | 64 | rPFcm | Right Area PFcm (IPL) |
| 66 | 65 | lPFcm | Left Area PFcm (IPL) |
| 67 | 66 | rFrontal-to-Occipital | Right Frontal-to-Occipital (GapMap) |
| 68 | 67 | lhIP5 | Left Area hIP5 (IPS) |
| 69 | 68 | rhIP5 | Right Area hIP5 (IPS) |
| 70 | 69 | l7P | Left Area 7P (SPL) |
| 71 | 70 | r7P | Right Area 7P (SPL) |
| 72 | 71 | l6d1 | Left Area 6d1 (PreCG) |
| 73 | 72 | r6d1 | Right Area 6d1 (PreCG) |
| 74 | 73 | lFG1 | Left Area FG1 (FusG) |
| 75 | 74 | rFG1 | Right Area FG1 (FusG) |
| 76 | 75 | lhIP4 | Left Area hIP4 (IPS) |
| 77 | 76 | rhIP4 | Right Area hIP4 (IPS) |
| 78 | 77 | lOP6 | Left Area OP6 (Frontal Operculum) |
| 79 | 78 | rOP6 | Right Area OP6 (Frontal Operculum) |
| 80 | 79 | lFG2 | Left Area FG2 (FusG) |
| 81 | 80 | rFG2 | Right Area FG2 (FusG) |
| 82 | 81 | lhIP6 | Left Area hIP6 (IPS) |
| 83 | 82 | rhIP6 | Right Area hIP6 (IPS) |
| 84 | 83 | lhIP3 | Left Area hIP3 (IPS) |
| 85 | 84 | rhIP3 | Right Area hIP3 (IPS) |
| 86 | 85 | lFo5 | Left Area Fo5 (OFC) |
| 87 | 86 | rFo5 | Right Area Fo5 (OFC) |
| 88 | 87 | lCM | Left CM (Amygdala) |
| 89 | 88 | rCM | Right CM (Amygdala) |
| 90 | 89 | lOP7 | Left Area OP7 (Frontal Operculum) |
| 91 | 90 | rOP7 | Right Area OP7 (Frontal Operculum) |
| 92 | 91 | l4p | Left Area 4p (PreCG) |
| 93 | 92 | r4p | Right Area 4p (PreCG) |
| 94 | 93 | l33 | Left Area 33 (ACC) |
| 95 | 94 | r33 | Right Area 33 (ACC) |
| 96 | 95 | lhOc6 | Left Area hOc6 (POS) |
| 97 | 96 | rHC-Prosubiculum | Right HC-Prosubiculum (Hippocampus) |
| 98 | 97 | lHC-Prosubiculum | Left HC-Prosubiculum (Hippocampus) |
| 99 | 98 | rhOc6 | Right Area hOc6 (POS) |
| 100 | 99 | lIg2 | Left Area Ig2 (Insula) |
| 101 | 100 | rIg2 | Right Area Ig2 (Insula) |
| 102 | 101 | lCA2 | Left CA2 (Hippocampus) |
| 103 | 102 | rCA2 | Right CA2 (Hippocampus) |
| 104 | 103 | lFp2 | Left Area Fp2 (FPole) |
| 105 | 104 | rFp2 | Right Area Fp2 (FPole) |
| 106 | 105 | lEntorhinalCortex | Left Entorhinal Cortex |
| 107 | 106 | rEntorhinalCortex | Right Entorhinal Cortex |
| 108 | 107 | lId4 | Left Area Id4 (Insula) |
| 109 | 108 | rId2 | Right Area Id2 (Insula) |
| 110 | 109 | lId2 | Left Area Id2 (Insula) |
| 111 | 110 | rId4 | Right Area Id4 (Insula) |
| 112 | 111 | lCA1 | Left CA1 (Hippocampus) |
| 113 | 112 | rOP1 | Right Area OP1 (POperc) |
| 114 | 113 | lOP1 | Left Area OP1 (POperc) |
| 115 | 114 | rCA1 | Right CA1 (Hippocampus) |
| 116 | 115 | lId6 | Left Area Id6 (Insula) |
| 117 | 116 | rId6 | Right Area Id6 (Insula) |
| 118 | 117 | lhIP8 | Left Area hIP8 (IPS) |
| 119 | 118 | rHC-Parasubiculum | Right HC-Parasubiculum (Hippocampus) |
| 120 | 119 | lHC-Parasubiculum | Left HC-Parasubiculum (Hippocampus) |
| 121 | 120 | rhIP8 | Right Area hIP8 (IPS) |
| 122 | 121 | lIF | Left IF (Amygdala) |
| 123 | 122 | rIF | Right IF (Amygdala) |
| 124 | 123 | lOP9 | Left Area OP9 (Frontal Operculum) |
| 125 | 124 | rOP9 | Right Area OP9 (Frontal Operculum) |
| 126 | 125 | lHC-Subiculum | Left HC-Subiculum (Hippocampus) |
| 127 | 126 | rHC-Subiculum | Right HC-Subiculum (Hippocampus) |
| 128 | 127 | lTemporal-to-Parietal | Left Temporal-to-Parietal (GapMap) |
| 129 | 128 | rTemporal-to-Parietal | Right Temporal-to-Parietal (GapMap) |
| 130 | 129 | l6d3 | Left Area 6d3 (SFS) |
| 131 | 130 | rVentralDentateNucleus | Right Ventral Dentate Nucleus (Cerebellum) |
| 132 | 131 | lVentralDentateNucleus | Left Ventral Dentate Nucleus (Cerebellum) |
| 133 | 132 | r6d3 | Right Area 6d3 (SFS) |
| 134 | 133 | lHATA | Left HATA (Hippocampus) |
| 135 | 134 | rHATA | Right HATA (Hippocampus) |
| 136 | 135 | lhIP2 | Left Area hIP2 (IPS) |
| 137 | 136 | rhIP2 | Right Area hIP2 (IPS) |
| 138 | 137 | l44 | Left Area 44 (IFG) |
| 139 | 138 | r44 | Right Area 44 (IFG) |
| 140 | 139 | lFo7 | Left Area Fo7 (OFC) |
| 141 | 140 | rFo7 | Right Area Fo7 (OFC) |
| 142 | 141 | l45 | Left Area 45 (IFG) |
| 143 | 142 | r45 | Right Area 45 (IFG) |
| 144 | 143 | lId1 | Left Area Id1 (Insula) |
| 145 | 144 | rId1 | Right Area Id1 (Insula) |
| 146 | 145 | l5Ci | Left Area 5Ci (SPL) |
| 147 | 146 | r5Ci | Right Area 5Ci (SPL) |
| 148 | 147 | lId5 | Left Area Id5 (Insula) |
| 149 | 148 | rTE1.2 | Right Area TE 1.2 (HESCHL) |
| 150 | 149 | lTE1.2 | Left Area TE 1.2 (HESCHL) |
| 151 | 150 | rId5 | Right Area Id5 (Insula) |
| 152 | 151 | lPGa | Left Area PGa (IPL) |
| 153 | 152 | rPGa | Right Area PGa (IPL) |
| 154 | 153 | lhIP1 | Left Area hIP1 (IPS) |
| 155 | 154 | rhIP1 | Right Area hIP1 (IPS) |
| 156 | 155 | l2 | Left Area 2 (PostCS) |
| 157 | 156 | r2 | Right Area 2 (PostCS) |
| 158 | 157 | lCh123 | Left Ch 123 (Basal Forebrain) |
| 159 | 158 | rCh123 | Right Ch 123 (Basal Forebrain) |
| 160 | 159 | lTE2.1 | Left Area TE 2.1 (STG) |
| 161 | 160 | rTE2.1 | Right Area TE 2.1 (STG) |
| 162 | 161 | lIa | Left Area Ia (Insula) |
| 163 | 162 | rIa | Right Area Ia (Insula) |
| 164 | 163 | lhOc3d | Left Area hOc3d (Cuneus) |
| 165 | 164 | rhOc3d | Right Area hOc3d (Cuneus) |
| 166 | 165 | lVTM | Left VTM (Amygdala) |
| 167 | 166 | rVTM | Right VTM (Amygdala) |
| 168 | 167 | lOP3 | Left Area OP3 (POperc) |
| 169 | 168 | rOP3 | Right Area OP3 (POperc) |
| 170 | 169 | l7A | Left Area 7A (SPL) |
| 171 | 170 | r7A | Right Area 7A (SPL) |
| 172 | 171 | lOP8 | Left Area OP8 (Frontal Operculum) |
| 173 | 172 | rOP8 | Right Area OP8 (Frontal Operculum) |
| 174 | 173 | lHC-Transsubiculum | Left HC-Transsubiculum (Hippocampus) |
| 175 | 174 | rHC-Transsubiculum | Right HC-Transsubiculum (Hippocampus) |
| 176 | 175 | l25 | Left Area 25 (sACC) |
| 177 | 176 | r7M | Right Area 7M (SPL) |
| 178 | 177 | l7M | Left Area 7M (SPL) |
| 179 | 178 | r25 | Right Area 25 (sACC) |
| 180 | 179 | lOP5 | Left Area OP5 (Frontal Operculum) |
| 181 | 180 | rOP5 | Right Area OP5 (Frontal Operculum) |
| 182 | 181 | lCA3 | Left CA3 (Hippocampus) |
| 183 | 182 | rPFm | Right Area PFm (IPL) |
| 184 | 183 | lPFm | Left Area PFm (IPL) |
| 185 | 184 | rCA3 | Right CA3 (Hippocampus) |
| 186 | 185 | lFrontal-II | Left Frontal-II (GapMap) |
| 187 | 186 | rFrontal-II | Right Frontal-II (GapMap) |
| 188 | 187 | lLB | Left LB (Amygdala) |
| 189 | 188 | rLB | Right LB (Amygdala) |
| 190 | 189 | l4a | Left Area 4a (PreCG) |
| 191 | 190 | rSTS1 | Right Area STS1 (STS) |
| 192 | 191 | lSTS1 | Left Area STS1 (STS) |
| 193 | 192 | r4a | Right Area 4a (PreCG) |
| 194 | 193 | l5L | Left Area 5L (SPL) |
| 195 | 194 | r5L | Right Area 5L (SPL) |
| 196 | 195 | l5M | Left Area 5M (SPL) |
| 197 | 196 | r5M | Right Area 5M (SPL) |
| 198 | 197 | lFrontal-to-Temporal | Left Frontal-to-Temporal (GapMap) |
| 199 | 198 | rFG3 | Right Area FG3 (FusG) |
| 200 | 199 | lFG3 | Left Area FG3 (FusG) |
| 201 | 200 | rFrontal-to-Temporal | Right Frontal-to-Temporal (GapMap) |
| 202 | 201 | lFp1 | Left Area Fp1 (FPole) |
| 203 | 202 | rFp1 | Right Area Fp1 (FPole) |
| 204 | 203 | lFastigialNucleus | Left Fastigial Nucleus (Cerebellum) |
| 205 | 204 | rFastigialNucleus | Right Fastigial Nucleus (Cerebellum) |
| 206 | 205 | ls32 | Left Area s32 (sACC) |
| 207 | 206 | rs32 | Right Area s32 (sACC) |
| 208 | 207 | lMF | Left MF (Amygdala) |
| 209 | 208 | rMF | Right MF (Amygdala) |
| 210 | 209 | l3a | Left Area 3a (PostCG) |
| 211 | 210 | r3a | Right Area 3a (PostCG) |
| 212 | 211 | lhOc5 | Left Area hOc5 (LOC) |
| 213 | 212 | rId7 | Right Area Id7 (Insula) |
| 214 | 213 | lId7 | Left Area Id7 (Insula) |
| 215 | 214 | rhOc5 | Right Area hOc5 (LOC) |
| 216 | 215 | lFG4 | Left Area FG4 (FusG) |
| 217 | 216 | rFG4 | Right Area FG4 (FusG) |
| 218 | 217 | lInterposedNucleus | Left Interposed Nucleus (Cerebellum) |
| 219 | 218 | rInterposedNucleus | Right Interposed Nucleus (Cerebellum) |
| 220 | 219 | lFo1 | Left Area Fo1 (OFC) |
| 221 | 220 | rSF | Right SF (Amygdala) |
| 222 | 221 | lSF | Left SF (Amygdala) |
| 223 | 222 | rFo1 | Right Area Fo1 (OFC) |
| 224 | 223 | ls24 | Left Area s24 (sACC) |
| 225 | 224 | rs24 | Right Area s24 (sACC) |
| 226 | 225 | lFo6 | Left Area Fo6 (OFC) |
| 227 | 226 | rFo6 | Right Area Fo6 (OFC) |
| 228 | 227 | lhOc4v | Left Area hOc4v (LingG) |
| 229 | 228 | rPFop | Right Area PFop (IPL) |
| 230 | 229 | lPFop | Left Area PFop (IPL) |
| 231 | 230 | rhOc4v | Right Area hOc4v (LingG) |
| 232 | 231 | lp32 | Left Area p32 (pACC) |
| 233 | 232 | rp32 | Right Area p32 (pACC) |
| 234 | 233 | lhOc1 | Left Area hOc1 (V1, 17, CalcS) |
| 235 | 234 | rhOc1 | Right Area hOc1 (V1, 17, CalcS) |
| 236 | 235 | lFo2 | Left Area Fo2 (OFC) |
| 237 | 236 | rFo2 | Right Area Fo2 (OFC) |
| 238 | 237 | lhIP7 | Left Area hIP7 (IPS) |
| 239 | 238 | rhIP7 | Right Area hIP7 (IPS) |
| 240 | 239 | lTE2.2 | Left Area TE 2.2 (STG) |
| 241 | 240 | rTE2.2 | Right Area TE 2.2 (STG) |
| 242 | 241 | l7PC | Left Area 7PC (SPL) |
| 243 | 242 | r7PC | Right Area 7PC (SPL) |
| 244 | 243 | lhOc4lp | Left Area hOc4lp (LOC) |
| 245 | 244 | rhOc4lp | Right Area hOc4lp (LOC) |
| 246 | 245 | lTeI | Left Area TeI (STG) |
| 247 | 246 | rFo3 | Right Area Fo3 (OFC) |
| 248 | 247 | lFo3 | Left Area Fo3 (OFC) |
| 249 | 248 | rTeI | Right Area TeI (STG) |