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Felix Hoffstaedter
a1b6176679
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--0.15.1.sing mriqc_clf --load-classifier -X group_T1w.tsv; mv mclf_run*data-unseen_pred.csv mclf_data-unseen_pred.csv",
"dsid": "83bb8411-8e23-489a-95d6-7dfdc67a958b",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--0.15.1.sing"
],
"inputs": [
"group_T1w.tsv"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
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| .datalad | ||
| code | ||
| duct-logs | ||
| sourcedata | ||
| sub-ts001 | ||
| sub-ts002 | ||
| sub-ts003 | ||
| sub-ts004 | ||
| sub-ts005 | ||
| sub-ts007 | ||
| sub-ts008 | ||
| sub-ts009 | ||
| sub-ts010 | ||
| .bidsignore | ||
| .gitattributes | ||
| .gitignore | ||
| .gitmodules | ||
| CHANGELOG.md | ||
| dataset_description.json | ||
| group_T1w.html | ||
| group_T1w.tsv | ||
| mclf_data-unseen_pred.csv | ||
| README.md | ||
| sub-ts001_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts001_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts001_ses-cfmri2_acq-fspgr_T1w.html | ||
| sub-ts001_ses-cfmri2_acq-mprage_T1w.html | ||
| sub-ts001_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts001_ses-sdsu2_acq-mprage_T1w.html | ||
| sub-ts002_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts002_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts002_ses-cfmri2_acq-fspgr_T1w.html | ||
| sub-ts002_ses-cfmri2_acq-mprage_T1w.html | ||
| sub-ts002_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts002_ses-sdsu2_acq-mprage_T1w.html | ||
| sub-ts003_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts003_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts003_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts004_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts004_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts004_ses-cfmri2_acq-fspgr_T1w.html | ||
| sub-ts004_ses-cfmri2_acq-mprage_T1w.html | ||
| sub-ts004_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts004_ses-sdsu2_acq-mprage_T1w.html | ||
| sub-ts005_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts005_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts005_ses-cfmri2_acq-fspgr_T1w.html | ||
| sub-ts005_ses-cfmri2_acq-mprage_T1w.html | ||
| sub-ts005_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts005_ses-sdsu2_acq-mprage_T1w.html | ||
| sub-ts007_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts007_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts007_ses-cfmri2_acq-fspgr_T1w.html | ||
| sub-ts007_ses-cfmri2_acq-mprage_T1w.html | ||
| sub-ts007_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts008_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts008_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts008_ses-cfmri2_acq-fspgr_T1w.html | ||
| sub-ts008_ses-cfmri2_acq-mprage_T1w.html | ||
| sub-ts008_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts008_ses-sdsu2_acq-mprage_T1w.html | ||
| sub-ts009_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts009_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts009_ses-sdsu1_acq-mprage_T1w.html | ||
| sub-ts010_ses-cfmri1_acq-fspgr_T1w.html | ||
| sub-ts010_ses-cfmri1_acq-mprage_T1w.html | ||
| sub-ts010_ses-sdsu1_acq-mprage_T1w.html | ||
ds005664 - MRIQC derivatives
This dataset is a BIDS Derivatives dataset resulting from running MRIQC 24.0.2 on ds005664.
Methods
MRIQC documentation can be found on https://mriqc.readthedocs.io/.
This dataset was created using BOOTSTRAP - a high-throughput container workflow for MRIQC implementing the FAIRly Big Workflow using Datalad and Singularity containers for full reproducibility and provenance capture including resource consumption via con-duct.
Acknowledgements
The authors from the Institute of Neuroscience and Medicine (INM-7) at the Forschungszentrum Jülich, Germany gratefully acknowledge the FENIX Research Infrastructure for funding this project by providing cloud computing time on the FZJ Supercomputer JUSUF at Jülich Supercomputing Centre (JSC).