614 lines
No EOL
44 KiB
HTML
614 lines
No EOL
44 KiB
HTML
<?xml version="1.0" encoding="utf-8" ?>
|
|
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
|
|
<head>
|
|
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
|
|
<meta name="generator" content="NiReports: https://www.nipreps.org/" />
|
|
<title>sub-8012_ses-01_task-RDMmotion_run-01_bold :: MRIQC's BOLD fMRI report</title>
|
|
<script src="https://code.jquery.com/jquery-3.6.0.min.js" integrity="sha256-/xUj+3OJU5yExlq6GSYGSHk7tPXikynS7ogEvDej/m4=" crossorigin="anonymous"></script>
|
|
<link href="https://cdn.jsdelivr.net/npm/bootstrap@5.2.3/dist/css/bootstrap.min.css" rel="stylesheet" integrity="sha384-rbsA2VBKQhggwzxH7pPCaAqO46MgnOM80zW1RWuH61DGLwZJEdK2Kadq2F9CUG65" crossorigin="anonymous">
|
|
<script src="https://cdn.jsdelivr.net/npm/bootstrap@5.2.3/dist/js/bootstrap.bundle.min.js" integrity="sha384-kenU1KFdBIe4zVF0s0G1M5b4hcpxyD9F7jL+jjXkk+Q2h455rYXK/7HAuoJl+0I4" crossorigin="anonymous"></script>
|
|
|
|
<script>
|
|
var timestamp = Date.now()
|
|
|
|
function read_form() {
|
|
var ds = "<unset>";
|
|
var sub = "sub-8012_ses-01_task-RDMmotion_run-01_bold.nii.gz";
|
|
|
|
var artifacts = [];
|
|
$('#qcartifacts-group input:checked').each(function() {
|
|
artifacts.push($(this).attr('name'));
|
|
});
|
|
|
|
var rating = $('#qcslider').val();
|
|
var payload = {
|
|
'dataset': ds,
|
|
'subject': sub,
|
|
'rating': rating,
|
|
'artifacts': artifacts,
|
|
'time_sec': (Date.now() - timestamp) / 1000,
|
|
'confidence': $('#qcextra-confidence').val(),
|
|
'comments': $('#qcextra-comments').val()
|
|
};
|
|
|
|
var file = new Blob([JSON.stringify(payload)], {type: 'text/json'});
|
|
$('#btn-download').attr('href', URL.createObjectURL(file));
|
|
$('#btn-download').attr('download', payload['dataset'] + "_" + payload['subject'] + ".json");
|
|
return payload
|
|
};
|
|
|
|
function toggle_rating() {
|
|
if ($('#qcrating-menu').hasClass('d-none')) {
|
|
$('#qcrating-menu').removeClass('d-none');
|
|
$('#qcrating-toggler').prop('checked', true);
|
|
} else {
|
|
$('#qcrating-menu').addClass('d-none');
|
|
$('#qcrating-toggler').prop('checked', false);
|
|
}
|
|
};
|
|
|
|
$(window).on('load',function(){
|
|
var authorization = $('#btn-post').val()
|
|
if (authorization.includes("secret_token")) {
|
|
$('#btn-post').addClass('d-none');
|
|
};
|
|
timestamp = Date.now();
|
|
});
|
|
|
|
</script>
|
|
<style type="text/css">
|
|
/* The slider itself */
|
|
.slider {
|
|
-webkit-appearance: none; /* Override default CSS styles */
|
|
appearance: none;
|
|
margin-bottom: 8px;
|
|
margin-left: 10%;
|
|
width: 80%;
|
|
height: 5px; /* Specified height */
|
|
background: #d3d3d3; /* Grey background */
|
|
outline: none; /* Remove outline */
|
|
opacity: 0.7; /* Set transparency (for mouse-over effects on hover) */
|
|
-webkit-transition: .2s; /* 0.2 seconds transition on hover */
|
|
transition: opacity .2s;
|
|
}
|
|
|
|
/* Mouse-over effects */
|
|
.slider:hover {
|
|
opacity: 1; /* Fully shown on mouse-over */
|
|
}
|
|
|
|
.slider::-webkit-slider-thumb {
|
|
-webkit-appearance: none;
|
|
appearance: none;
|
|
width: 25px;
|
|
height: 25px;
|
|
border: 0;
|
|
background: url('https://raw.githubusercontent.com/nipreps/nireports/main/assets/slider-handle.png');
|
|
cursor: pointer;
|
|
z-index: 2000 !important;
|
|
}
|
|
|
|
.slider::-moz-range-thumb {
|
|
width: 25px;
|
|
height: 25px;
|
|
border: 0;
|
|
background: url('https://raw.githubusercontent.com/nipreps/nireports/main/assets/slider-handle.png');
|
|
cursor: pointer;
|
|
z-index: 2000 !important;
|
|
}
|
|
|
|
</style>
|
|
</head>
|
|
<body style="font-family: helvetica;">
|
|
<nav class="navbar fixed-top navbar-expand-lg bg-light">
|
|
<div class="container-fluid">
|
|
<div class="collapse navbar-collapse" id="navbarSupportedContent">
|
|
<ul class="navbar-nav me-auto mb-2 mb-lg-0">
|
|
<li class="nav-item"><a class="nav-link" href="#Basic echo-wise reports">Basic echo-wise reports</a></li>
|
|
<li class="nav-item"><a class="nav-link" href="#Extended echo-wise reports">Extended echo-wise reports</a></li>
|
|
<li class="nav-item"><a class="nav-link" href="#Extended reports shared across echos">Extended reports shared across echos</a></li>
|
|
<li class="nav-item dropdown">
|
|
<a class="nav-link dropdown-toggle" id="navbarAbout" role="button" data-bs-toggle="dropdown" aria-expanded="false" href="#About">
|
|
About
|
|
</a>
|
|
<ul class="dropdown-menu">
|
|
<li><a class="dropdown-item" href="#errors">Errors</a></li>
|
|
<li><a class="dropdown-item" href="#meta-about-metadata">Reproducibility and provenance information</a></li>
|
|
</ul>
|
|
</li>
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
<div class="d-flex flex-row-reverse">
|
|
<div class="form-check form-switch align-self-center flex-fill me-4">
|
|
<input class="form-check-input" type="checkbox" id="qcrating-toggler"></input>
|
|
<label class="form-check-label" style="width: 100pt;" for="qcrating-toggler">Rating widget</label>
|
|
</div>
|
|
</div>
|
|
</nav>
|
|
<noscript>
|
|
<h1 class="text-danger"> The navigation menu uses Javascript. Without it this report might not work as expected </h1>
|
|
</noscript>
|
|
|
|
<div id="Basic echo-wise reports" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">Basic echo-wise reports</h1>
|
|
<div id="datatype-figures_desc-stdev_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Standard deviation of signal through time</h3><p class="elem-caption">The voxel-wise standard deviation of the signal (variability along time).</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-stdev_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-stdev_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-stdev_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-background_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">View of the background of the voxel-wise average of the BOLD timeseries</h3><p class="elem-caption">This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-background_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-background_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-background_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-zoomed_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Voxel-wise average of BOLD time-series, zoomed-in covering just the brain</h3><p class="elem-caption">This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-zoomed_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-zoomed_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-zoomed_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-carpet_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Carpetplot and nuisance signals</h3><p class="elem-caption">The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-carpet_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-carpet_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-carpet_bold.svg</a></small>
|
|
|
|
</div>
|
|
</div>
|
|
<div id="Extended echo-wise reports" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">Extended echo-wise reports</h1>
|
|
<div id="datatype-figures_desc-mean_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Voxel-wise average of BOLD time-series</h3><p class="elem-caption">The average signal calculated across the last axis (time).</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-mean_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-mean_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-mean_bold.svg</a></small>
|
|
|
|
</div>
|
|
</div>
|
|
<div id="Extended reports shared across echos" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">Extended reports shared across echos</h1>
|
|
<div id="datatype-figures_desc-brainmask_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Brain extraction performance</h3><p class="elem-caption">Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-brainmask_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-brainmask_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-brainmask_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-norm_run-01_session-01_subject-8012_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Spatial normalization of the anatomical image</h3><p class="elem-caption">This panel shows a <em>quick-and-dirty</em> nonlinear registration into the <code>MNI152NLin2009cAsym</code> template accessed with <a href="https://templateflow.org/browse" target="_blank"><em>TemplateFlow</em></a>.</p> <div class="reportlet">
|
|
<object class="svg-reportlet" type="image/svg+xml" data="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-norm_bold.svg" style="">
|
|
Problem loading figure sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.</object>
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-norm_bold.svg" target="_blank">sub-8012/figures/sub-8012_ses-01_task-RDMmotion_run-01_desc-norm_bold.svg</a></small>
|
|
|
|
</div>
|
|
</div>
|
|
<div id="About" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">About</h1>
|
|
<div id="errors" class="ps-4 pe-4 mb-2">
|
|
<h2 class="sub-report-group mt-4">Errors</h2> <p class="alert alert-success" role="alert">No errors to report!</p>
|
|
</div>
|
|
<div id="meta-about-metadata" class="ps-4 pe-4 mb-2">
|
|
<h2 class="sub-report-group mt-4">Reproducibility and provenance information</h2><p class="elem-caption">Thanks for using <em>MRIQC</em>. The following information may assist in
|
|
reconstructing the provenance of the corresponding derivatives.
|
|
</p> <div class="accordion accordion-flush" id="about-metadata">
|
|
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="about-metadata-0">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-0-collapse" aria-controls="about-metadata-0-collapse">
|
|
Provenance Information
|
|
</button>
|
|
</h2>
|
|
<div id="about-metadata-0-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-0-heading" data-bs-parent="#about-metadata-0">
|
|
<div class="accordion-body metadata-table">
|
|
<table id="about-metadata-table-0" class="table table-sm table-striped">
|
|
<tr><td colspan=2>Execution environment</td><td>singularity</td></tr>
|
|
<tr><td colspan=2>Input filename</td><td><BIDS root>/sub-8012/ses-01/func/sub-8012_ses-01_task-RDMmotion_run-01_bold.nii.gz</td></tr>
|
|
<tr><td>Versions</td><td>MRIQC</td><td>24.1.0.dev0+gd5b13cb5.d20240826</td></tr>
|
|
<tr><td>Versions</td><td>NiPype</td><td>1.8.6</td></tr>
|
|
<tr><td>Versions</td><td>TemplateFlow</td><td>24.2.0</td></tr>
|
|
<tr><td colspan=2>md5sum</td><td>401dd5ab73589df29be76e4211ee6d05</td></tr>
|
|
</table>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="about-metadata-1">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-1-collapse" aria-controls="about-metadata-1-collapse">
|
|
Dataset Information
|
|
</button>
|
|
</h2>
|
|
<div id="about-metadata-1-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-1-heading" data-bs-parent="#about-metadata-1">
|
|
<div class="accordion-body metadata-table">
|
|
<table id="about-metadata-table-1" class="table table-sm table-striped">
|
|
<tr><td colspan=2>AcquisitionMatrixPE</td><td>88</td></tr>
|
|
<tr><td colspan=2>AcquisitionNumber</td><td>1</td></tr>
|
|
<tr><td colspan=2>AcquisitionTime</td><td>11:42:29.350000</td></tr>
|
|
<tr><td colspan=2>BandwidthPerPixelPhaseEncode</td><td>19.592</td></tr>
|
|
<tr><td colspan=2>BaseResolution</td><td>88</td></tr>
|
|
<tr><td colspan=2>BodyPartExamined</td><td>BRAIN</td></tr>
|
|
<tr><td colspan=2>ConsistencyInfo</td><td>N4_VE11C_LATEST_20160120</td></tr>
|
|
<tr><td colspan=2>ConversionSoftware</td><td>dcm2niix</td></tr>
|
|
<tr><td colspan=2>ConversionSoftwareVersion</td><td>v1.0.20190902</td></tr>
|
|
<tr><td colspan=2>DerivedVendorReportedEchoSpacing</td><td>0.000580014</td></tr>
|
|
<tr><td colspan=2>DeviceSerialNumber</td><td>67050</td></tr>
|
|
<tr><td colspan=2>DwellTime</td><td>2.6e-06</td></tr>
|
|
<tr><td colspan=2>EchoTime</td><td>0.033</td></tr>
|
|
<tr><td colspan=2>EchoTrainLength</td><td>88</td></tr>
|
|
<tr><td colspan=2>EffectiveEchoSpacing</td><td>0.000580014</td></tr>
|
|
<tr><td colspan=2>FlipAngle</td><td>62</td></tr>
|
|
<tr><td colspan=2>ImageOrientationPatientDICOM</td><td>[0.999162, 0.0322067, 0.0252737, -0.0277346, 0.986599, -0.16079]</td></tr>
|
|
<tr><td colspan=2>ImageType</td><td>['ORIGINAL', 'PRIMARY', 'M', 'ND', 'MOSAIC']</td></tr>
|
|
<tr><td colspan=2>ImagingFrequency</td><td>123.251</td></tr>
|
|
<tr><td colspan=2>InPlanePhaseEncodingDirectionDICOM</td><td>COL</td></tr>
|
|
<tr><td colspan=2>InstitutionAddress</td><td>Olive_Street_60_Providence_RI_US_02912</td></tr>
|
|
<tr><td colspan=2>InstitutionName</td><td>BROWN_UNIVERSITY_MRF</td></tr>
|
|
<tr><td colspan=2>InstitutionalDepartmentName</td><td>Department</td></tr>
|
|
<tr><td colspan=2>MRAcquisitionType</td><td>2D</td></tr>
|
|
<tr><td colspan=2>MagneticFieldStrength</td><td>3</td></tr>
|
|
<tr><td colspan=2>Manufacturer</td><td>Siemens</td></tr>
|
|
<tr><td colspan=2>ManufacturersModelName</td><td>Prisma_fit</td></tr>
|
|
<tr><td colspan=2>Modality</td><td>MR</td></tr>
|
|
<tr><td colspan=2>MultibandAccelerationFactor</td><td>4</td></tr>
|
|
<tr><td colspan=2>PartialFourier</td><td>1</td></tr>
|
|
<tr><td colspan=2>PatientPosition</td><td>HFS</td></tr>
|
|
<tr><td colspan=2>PercentPhaseFOV</td><td>100</td></tr>
|
|
<tr><td colspan=2>PhaseEncodingDirection</td><td>j-</td></tr>
|
|
<tr><td colspan=2>PhaseEncodingSteps</td><td>88</td></tr>
|
|
<tr><td colspan=2>PhaseResolution</td><td>1</td></tr>
|
|
<tr><td colspan=2>PixelBandwidth</td><td>2185</td></tr>
|
|
<tr><td colspan=2>ProcedureStepDescription</td><td>ASHENHAV_1222</td></tr>
|
|
<tr><td colspan=2>ProtocolName</td><td>func-bold_task-RDMmotion_run-01</td></tr>
|
|
<tr><td colspan=2>PulseSequenceDetails</td><td>%SiemensSeq%_ep2d_bold</td></tr>
|
|
<tr><td colspan=2>ReceiveCoilActiveElements</td><td>HC1-7</td></tr>
|
|
<tr><td colspan=2>ReceiveCoilName</td><td>HeadNeck_64</td></tr>
|
|
<tr><td colspan=2>ReconMatrixPE</td><td>88</td></tr>
|
|
<tr><td colspan=2>RefLinesPE</td><td>8</td></tr>
|
|
<tr><td colspan=2>RepetitionTime</td><td>1.2</td></tr>
|
|
<tr><td colspan=2>SAR</td><td>0.0513239</td></tr>
|
|
<tr><td colspan=2>ScanOptions</td><td>FS</td></tr>
|
|
<tr><td colspan=2>ScanningSequence</td><td>EP</td></tr>
|
|
<tr><td colspan=2>SequenceName</td><td>_epfid2d1_88</td></tr>
|
|
<tr><td colspan=2>SequenceVariant</td><td>SK</td></tr>
|
|
<tr><td colspan=2>SeriesDescription</td><td>func-bold_task-RDMmotion_run-01</td></tr>
|
|
<tr><td colspan=2>SeriesNumber</td><td>7</td></tr>
|
|
<tr><td colspan=2>ShimSetting</td><td>[1767, -9057, 4450, 426, -56, -141, -82, 20]</td></tr>
|
|
<tr><td colspan=2>SliceThickness</td><td>2.4</td></tr>
|
|
<tr><td colspan=2>SliceTiming</td><td>[0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025, 0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025, 0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025, 0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025]</td></tr>
|
|
<tr><td colspan=2>SoftwareVersions</td><td>syngo_MR_E11</td></tr>
|
|
<tr><td colspan=2>SpacingBetweenSlices</td><td>2.4</td></tr>
|
|
<tr><td colspan=2>StationName</td><td>AWP67050</td></tr>
|
|
<tr><td colspan=2>TaskName</td><td>RDMmotion</td></tr>
|
|
<tr><td colspan=2>TotalReadoutTime</td><td>0.0504612</td></tr>
|
|
<tr><td colspan=2>TxRefAmp</td><td>218.178</td></tr>
|
|
<tr><td>dcmmeta</td><td>affine</td><td>[[-2.395717144012451, -0.06649994850158691, 0.07227249443531036, 112.29190826416016], [-0.07722286134958267, 2.3655951023101807, -0.3838900029659271, -84.8451919555664], [0.060599494725465775, 0.38553038239479065, 2.3679959774017334, -72.6089859008789], [0.0, 0.0, 0.0, 1.0]]</td></tr>
|
|
<tr><td>dcmmeta</td><td>reorient_transform</td><td>[[0.0, -1.0, 0.0, 87.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]</td></tr>
|
|
<tr><td>dcmmeta</td><td>shape</td><td>[88, 88, 60, 125]</td></tr>
|
|
<tr><td>dcmmeta</td><td>slice_dim</td><td>2</td></tr>
|
|
<tr><td>dcmmeta</td><td>version</td><td>0.6</td></tr>
|
|
<tr><td colspan=2>time</td><td>{'samples': {'AcquisitionNumber': [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125], 'AcquisitionTime': ['114229.350000', '114230.550000', '114231.750000', '114232.950000', '114234.150000', '114235.350000', '114236.550000', '114237.750000', '114238.950000', '114240.150000', '114241.350000', '114242.550000', '114243.750000', '114244.950000', '114246.150000', '114247.350000', '114248.550000', '114249.750000', '114250.950000', '114252.150000', '114253.350000', '114254.550000', '114255.750000', '114256.950000', '114258.150000', '114259.350000', '114300.550000', '114301.750000', '114302.950000', '114304.150000', '114305.350000', '114306.550000', '114307.750000', '114308.950000', '114310.150000', '114311.350000', '114312.550000', '114313.750000', '114314.950000', '114316.150000', '114317.350000', '114318.550000', '114319.750000', '114320.950000', '114322.150000', '114323.350000', '114324.550000', '114325.750000', '114326.950000', '114328.150000', '114329.350000', '114330.550000', '114331.750000', '114332.950000', '114334.150000', '114335.350000', '114336.550000', '114337.750000', '114338.950000', '114340.150000', '114341.350000', '114342.550000', '114343.750000', '114344.950000', '114346.150000', '114347.350000', '114348.550000', '114349.750000', '114350.950000', '114352.150000', '114353.350000', '114354.550000', '114355.750000', '114356.950000', '114358.150000', '114359.350000', '114400.550000', '114401.750000', '114402.950000', '114404.150000', '114405.350000', '114406.550000', '114407.750000', '114408.950000', '114410.150000', '114411.350000', '114412.550000', '114413.750000', '114414.950000', '114416.150000', '114417.350000', '114418.550000', '114419.750000', '114420.950000', '114422.150000', '114423.350000', '114424.550000', '114425.750000', '114426.950000', '114428.150000', '114429.350000', '114430.550000', '114431.750000', '114432.950000', '114434.150000', '114435.350000', '114436.550000', '114437.750000', '114438.950000', '114440.150000', '114441.350000', '114442.550000', '114443.750000', '114444.950000', '114446.150000', '114447.350000', '114448.550000', '114449.750000', '114450.950000', '114452.150000', '114453.350000', '114454.550000', '114455.750000', '114456.950000', '114458.150000'], 'ContentTime': ['114300.436000', '114300.440000', '114300.443000', '114300.445000', '114300.460000', '114300.462000', '114300.465000', '114300.467000', '114300.473000', '114300.476000', '114300.478000', '114300.489000', '114300.492000', '114300.495000', '114300.498000', '114300.501000', '114300.503000', '114300.506000', '114300.508000', '114300.511000', '114300.514000', '114300.516000', '114300.519000', '114300.521000', '114300.524000', '114340.431000', '114340.434000', '114340.437000', '114340.439000', '114340.442000', '114340.444000', '114340.447000', '114340.450000', '114340.452000', '114340.455000', '114340.457000', '114340.461000', '114340.463000', '114340.470000', '114340.473000', '114340.476000', '114340.478000', '114340.481000', '114340.483000', '114340.486000', '114340.488000', '114340.491000', '114340.493000', '114340.496000', '114340.498000', '114340.501000', '114340.503000', '114340.506000', '114340.508000', '114340.511000', '114340.514000', '114340.516000', '114340.519000', '114340.521000', '114420.431000', '114420.434000', '114420.437000', '114420.439000', '114420.442000', '114420.444000', '114420.459000', '114420.462000', '114420.465000', '114420.467000', '114420.470000', '114420.472000', '114420.475000', '114420.477000', '114420.480000', '114420.482000', '114420.485000', '114420.487000', '114420.490000', '114420.492000', '114420.495000', '114420.497000', '114420.500000', '114420.502000', '114420.505000', '114420.509000', '114420.511000', '114420.514000', '114420.516000', '114420.519000', '114420.521000', '114420.524000', '114420.526000', '114459.340000', '114459.342000', '114459.345000', '114459.348000', '114459.350000', '114459.353000', '114459.355000', '114459.358000', '114459.360000', '114459.363000', '114459.365000', '114459.368000', '114459.371000', '114459.373000', '114459.376000', '114459.379000', '114459.381000', '114459.384000', '114459.386000', '114459.389000', '114459.391000', '114459.394000', '114459.396000', '114459.399000', '114459.401000', '114459.404000', '114459.414000', '114459.417000', '114459.420000', '114459.422000', '114459.425000', '114459.433000', '114459.436000'], 'InstanceCreationTime': ['114300.436000', '114300.440000', '114300.443000', '114300.445000', '114300.460000', '114300.462000', '114300.465000', '114300.467000', '114300.473000', '114300.476000', '114300.478000', '114300.489000', '114300.492000', '114300.495000', '114300.498000', '114300.501000', '114300.503000', '114300.506000', '114300.508000', '114300.511000', '114300.514000', '114300.516000', '114300.519000', '114300.521000', '114300.524000', '114340.431000', '114340.434000', '114340.437000', '114340.439000', '114340.442000', '114340.444000', '114340.447000', '114340.450000', '114340.452000', '114340.455000', '114340.457000', '114340.461000', '114340.463000', '114340.470000', '114340.473000', '114340.476000', '114340.478000', '114340.481000', '114340.483000', '114340.486000', '114340.488000', '114340.491000', '114340.493000', '114340.496000', '114340.498000', '114340.501000', '114340.503000', '114340.506000', '114340.508000', '114340.511000', '114340.514000', '114340.516000', '114340.519000', '114340.521000', '114420.431000', '114420.434000', '114420.437000', '114420.439000', '114420.442000', '114420.444000', '114420.459000', '114420.462000', '114420.465000', '114420.467000', '114420.470000', '114420.472000', '114420.475000', '114420.477000', '114420.480000', '114420.482000', '114420.485000', '114420.487000', '114420.490000', '114420.492000', '114420.495000', '114420.497000', '114420.500000', '114420.502000', '114420.505000', '114420.509000', '114420.511000', '114420.514000', '114420.516000', '114420.519000', '114420.521000', '114420.524000', '114420.526000', '114459.340000', '114459.342000', '114459.345000', '114459.348000', '114459.350000', '114459.353000', '114459.355000', '114459.358000', '114459.360000', '114459.363000', '114459.365000', '114459.368000', '114459.371000', '114459.373000', '114459.376000', '114459.379000', '114459.381000', '114459.384000', '114459.386000', '114459.389000', '114459.391000', '114459.394000', '114459.396000', '114459.399000', '114459.401000', '114459.404000', '114459.414000', '114459.417000', '114459.420000', '114459.422000', '114459.425000', '114459.433000', '114459.436000'], 'InstanceNumber': [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125], 'LargestImagePixelValue': [3261, 3254, 3214, 3183, 3194, 3141, 3085, 3096, 3079, 3142, 3091, 3172, 3119, 3175, 3086, 3139, 3113, 3010, 3139, 3082, 3171, 3082, 3120, 3035, 3080, 3069, 3140, 3070, 3188, 3053, 3172, 3048, 3184, 3170, 3195, 3165, 3166, 3094, 3121, 3114, 3114, 3090, 3077, 3045, 3013, 3062, 2975, 3032, 2993, 2981, 2985, 2972, 2957, 3031, 3015, 3037, 2963, 3033, 2974, 3087, 3054, 3138, 3075, 3163, 3117, 3040, 3132, 3077, 3177, 3049, 3183, 3035, 3092, 3067, 3049, 3162, 3066, 3127, 3099, 3076, 3164, 3078, 3114, 3034, 2949, 3040, 3036, 3082, 3105, 3121, 3086, 3022, 3012, 2955, 2988, 2988, 2986, 3101, 3017, 3134, 3067, 3121, 3043, 3055, 3022, 3070, 3004, 3089, 3030, 3127, 3059, 3123, 3000, 3064, 3038, 3047, 2991, 3003, 2903, 2994, 2982, 3032, 3055, 3051, 3121], 'WindowCenter': [679.0, 677.0, 676.0, 675.0, 675.0, 673.0, 672.0, 671.0, 671.0, 671.0, 671.0, 672.0, 671.0, 672.0, 671.0, 672.0, 671.0, 670.0, 671.0, 671.0, 672.0, 671.0, 671.0, 669.0, 669.0, 669.0, 669.0, 669.0, 670.0, 669.0, 670.0, 669.0, 671.0, 672.0, 673.0, 672.0, 671.0, 670.0, 670.0, 671.0, 670.0, 671.0, 670.0, 669.0, 669.0, 670.0, 669.0, 669.0, 669.0, 668.0, 668.0, 668.0, 668.0, 669.0, 669.0, 669.0, 668.0, 669.0, 669.0, 670.0, 670.0, 671.0, 670.0, 671.0, 669.0, 668.0, 669.0, 670.0, 671.0, 670.0, 670.0, 669.0, 669.0, 669.0, 669.0, 670.0, 670.0, 670.0, 669.0, 669.0, 670.0, 669.0, 669.0, 668.0, 667.0, 668.0, 668.0, 669.0, 670.0, 670.0, 670.0, 668.0, 668.0, 668.0, 668.0, 668.0, 667.0, 669.0, 668.0, 669.0, 669.0, 670.0, 669.0, 669.0, 668.0, 669.0, 669.0, 669.0, 669.0, 670.0, 669.0, 669.0, 668.0, 668.0, 668.0, 668.0, 667.0, 666.0, 665.0, 666.0, 666.0, 668.0, 668.0, 669.0, 670.0], 'WindowWidth': [1472.0, 1465.0, 1461.0, 1458.0, 1457.0, 1454.0, 1451.0, 1449.0, 1448.0, 1448.0, 1447.0, 1449.0, 1448.0, 1451.0, 1449.0, 1450.0, 1448.0, 1447.0, 1448.0, 1447.0, 1449.0, 1448.0, 1448.0, 1443.0, 1444.0, 1443.0, 1443.0, 1443.0, 1444.0, 1443.0, 1445.0, 1443.0, 1448.0, 1451.0, 1453.0, 1449.0, 1448.0, 1446.0, 1446.0, 1447.0, 1446.0, 1447.0, 1445.0, 1444.0, 1444.0, 1444.0, 1443.0, 1444.0, 1443.0, 1441.0, 1440.0, 1440.0, 1441.0, 1442.0, 1444.0, 1444.0, 1442.0, 1443.0, 1443.0, 1445.0, 1445.0, 1448.0, 1445.0, 1446.0, 1443.0, 1441.0, 1442.0, 1444.0, 1448.0, 1446.0, 1446.0, 1443.0, 1443.0, 1443.0, 1444.0, 1445.0, 1445.0, 1445.0, 1443.0, 1444.0, 1444.0, 1443.0, 1443.0, 1440.0, 1438.0, 1442.0, 1442.0, 1443.0, 1445.0, 1445.0, 1445.0, 1442.0, 1441.0, 1440.0, 1440.0, 1439.0, 1439.0, 1443.0, 1441.0, 1444.0, 1443.0, 1445.0, 1443.0, 1443.0, 1442.0, 1442.0, 1443.0, 1443.0, 1444.0, 1444.0, 1444.0, 1443.0, 1441.0, 1441.0, 1441.0, 1439.0, 1438.0, 1436.0, 1433.0, 1435.0, 1437.0, 1439.0, 1442.0, 1443.0, 1445.0]}, 'slices': {}}</td></tr>
|
|
</table>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="about-metadata-2">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-2-collapse" aria-controls="about-metadata-2-collapse">
|
|
Extracted Image quality metrics (IQMs)
|
|
</button>
|
|
</h2>
|
|
<div id="about-metadata-2-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-2-heading" data-bs-parent="#about-metadata-2">
|
|
<div class="accordion-body metadata-table">
|
|
<table id="about-metadata-table-2" class="table table-sm table-striped">
|
|
<tr><td colspan=3>aor</td><td>0.0026624166666666667</td></tr>
|
|
<tr><td colspan=3>aqi</td><td>0.003123475</td></tr>
|
|
<tr><td colspan=3>dummy_trs</td><td>5</td></tr>
|
|
<tr><td>dvars</td><td colspan=2>nstd</td><td>36.875493987226875</td></tr>
|
|
<tr><td>dvars</td><td colspan=2>std</td><td>1.2513986167226894</td></tr>
|
|
<tr><td>dvars</td><td colspan=2>vstd</td><td>1.0120014236134454</td></tr>
|
|
<tr><td colspan=3>efc</td><td>0.5384</td></tr>
|
|
<tr><td colspan=3>fber</td><td>515.17</td></tr>
|
|
<tr><td>fd</td><td colspan=2>mean</td><td>0.12332802279773201</td></tr>
|
|
<tr><td>fd</td><td colspan=2>num</td><td>6</td></tr>
|
|
<tr><td>fd</td><td colspan=2>perc</td><td>5.0</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>avg</td><td>3.9209712815643964</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>x</td><td>3.7589930197616597</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>y</td><td>3.9772997515928776</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>z</td><td>4.026621073338652</td></tr>
|
|
<tr><td colspan=3>gcor</td><td>0.0114904</td></tr>
|
|
<tr><td>gsr</td><td colspan=2>x</td><td>0.009470881894230843</td></tr>
|
|
<tr><td>gsr</td><td colspan=2>y</td><td>0.09461283683776855</td></tr>
|
|
<tr><td>size</td><td colspan=2>t</td><td>120</td></tr>
|
|
<tr><td>size</td><td colspan=2>x</td><td>88</td></tr>
|
|
<tr><td>size</td><td colspan=2>y</td><td>88</td></tr>
|
|
<tr><td>size</td><td colspan=2>z</td><td>60</td></tr>
|
|
<tr><td colspan=3>snr</td><td>1.9105470705132004</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>tr</td><td>1.2000000476837158</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>x</td><td>2.3977272510528564</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>y</td><td>2.3977272510528564</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>z</td><td>2.3999998569488525</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>k</td><td>49.4864</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>mad</td><td>15.0113</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>mean</td><td>73.9176</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>median</td><td>25.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>n</td><td>349048.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>p05</td><td>13.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>p95</td><td>289.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>stdv</td><td>153.4172</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>k</td><td>1.0029</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>mad</td><td>258.8871</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>mean</td><td>623.5155</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>median</td><td>573.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>n</td><td>115592.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>p05</td><td>193.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>p95</td><td>1195.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>stdv</td><td>299.9128</td></tr>
|
|
<tr><td colspan=3>tsnr</td><td>53.76739512383938</td></tr>
|
|
</table>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<div id="qcrating-menu" class="card position-fixed d-none" style="width: 30%; top: 100px; left: 65%; max-height: 85%; overflow-y: auto;">
|
|
<div class="card-header m-0">
|
|
Rating widget
|
|
<button type="button" class="btn-close position-absolute top-0 end-0" aria-label="Close" id="close-qcrating-menu" onclick="toggle_rating()" style="margin: 10px 10px 0 0"></button>
|
|
</div>
|
|
<div class="card-body">
|
|
<div class="accordion">
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcslider-head">
|
|
<button class="accordion-button" type="button" data-bs-toggle="collapse" data-bs-target="#qcslider-collapse" aria-expanded="true" aria-controls="qcslider-collapse">Overall Quality Rating</button>
|
|
</h2>
|
|
<div id="qcslider-collapse" class="accordion-collapse collapse show" aria-labelledby="qcslider-head">
|
|
<div class="accordion-body">
|
|
<input type="range" min="1.0" max="4.0" step="0.05" value="2.5" id="qcslider" class="slider">
|
|
<ul class="list-group list-group-horizontal slider-labels" style="width: 100%">
|
|
<li class="list-group-item list-group-item-danger small" style="font-size: 0.7em; width: 25%; text-align:center">Exclude</li>
|
|
<li class="list-group-item list-group-item-warning small" style="font-size: 0.7em; width: 25%; text-align:center">Poor</li>
|
|
<li class="list-group-item list-group-item-primary small" style="font-size: 0.7em; width: 25%; text-align:center">Acceptable</li>
|
|
<li class="list-group-item list-group-item-success small" style="font-size: 0.7em; width: 25%; text-align:center">Excellent</li>
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcartifacts-head">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#qcartifacts-collapse" aria-expanded="false" aria-controls="qcartifacts-collapse">
|
|
Record specific artifacts
|
|
</button>
|
|
</h2>
|
|
<div id="qcartifacts-collapse" class="accordion-collapse collapse" aria-labelledby="qcartifacts-head">
|
|
<div class="accordion-body">
|
|
<fieldset id="qcartifacts-group" class="form-group">
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="head-motion" id="qcartifacts-item-0" />
|
|
<label class="form-check-label" for="qcartifacts-item-0">Head motion artifacts</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="eye-spillover" id="qcartifacts-item-1" />
|
|
<label class="form-check-label" for="qcartifacts-item-1">Eye spillover through <abbr title="phase-encoding">PE</abbr> axis</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noneye-spillover" id="qcartifacts-item-2" />
|
|
<label class="form-check-label" for="qcartifacts-item-2">Non-eye spillover through <abbr title="phase-encoding">PE</abbr> axis</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="coil-failure" id="qcartifacts-item-3" />
|
|
<label class="form-check-label" for="qcartifacts-item-3">Coil failure</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noise-global" id="qcartifacts-item-4" />
|
|
<label class="form-check-label" for="qcartifacts-item-4">Global noise</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noise-local" id="qcartifacts-item-5" />
|
|
<label class="form-check-label" for="qcartifacts-item-5">Local noise</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="em-perturbation" id="qcartifacts-item-6" />
|
|
<label class="form-check-label" for="qcartifacts-item-6"><abbr title="electromagnetic">EM</abbr> interference/perturbation</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="wrap-around" id="qcartifacts-item-7" />
|
|
<label class="form-check-label" for="qcartifacts-item-7">Problematic <abbr title="field-of-view">FoV</abbr> prescription / wrap-around</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="ghost-aliasing" id="qcartifacts-item-8" />
|
|
<label class="form-check-label" for="qcartifacts-item-8">Aliasing ghosts</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="ghost-other" id="qcartifacts-item-9" />
|
|
<label class="form-check-label" for="qcartifacts-item-9">Other ghosts (for example, <abbr title="radiofrequency">RF</abbr> spoiling)</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="inu" id="qcartifacts-item-10" />
|
|
<label class="form-check-label" for="qcartifacts-item-10">Intensity non-uniformity (B<sub>1</sub> bias)</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="field-variation" id="qcartifacts-item-11" />
|
|
<label class="form-check-label" for="qcartifacts-item-11">Temporal B<sub>1</sub> field non-uniformity variation</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="processing" id="qcartifacts-item-12" />
|
|
<label class="form-check-label" for="qcartifacts-item-12">Processing such as denoising, defacing or resamplings happened</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="uncategorized" id="qcartifacts-item-13" />
|
|
<label class="form-check-label" for="qcartifacts-item-13">Other uncategorized artifact(s)</label>
|
|
</div>
|
|
</fieldset>
|
|
</div> <!-- accordion-body -->
|
|
</div> <!-- accordion-collapse -->
|
|
</div> <!-- accordion-item -->
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcextra-head">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#qcextra-collapse" aria-expanded="false" aria-controls="qcextra-collapse">
|
|
Extra details
|
|
</button>
|
|
</h2>
|
|
<div id="qcextra-collapse" class="accordion-collapse collapse" aria-labelledby="qcextra-head">
|
|
<div class="accordion-body">
|
|
<div class="input-group">
|
|
<span class="input-group-text">Comments</span>
|
|
<textarea class="form-control" aria-label="Comments" id="qcextra-comments"></textarea>
|
|
</div>
|
|
|
|
<p style="margin-top: 20px; font-weight: bold">Rater confidence</p>
|
|
<input type="range" min="0.0" max="4.0" step="0.05" value="3.5" id="qcextra-confidence" class="slider" style="margin-left: 22%;width: 56%;">
|
|
<ul class="list-group list-group-horizontal slider-labels" style="width: 100%">
|
|
<li class="list-group-item list-group-item-warning small" style="width: 50%; text-align:center">Doubtful</li>
|
|
<li class="list-group-item list-group-item-success bg-success text-white small" style="width: 50%; text-align:center">Confident</li>
|
|
</ul>
|
|
</div> <!-- accordion-body -->
|
|
</div> <!-- accordion-collapse -->
|
|
</div> <!-- accordion-item -->
|
|
</div>
|
|
<div style="margin-top: 10px">
|
|
<a class="btn btn-primary disabled" id="btn-download" href="">Download</a>
|
|
<button class="btn btn-primary" id="btn-post" value="8sSYVI0XjFqacEMZ8wF4" disabled>Share publicly</button>
|
|
</div>
|
|
<script type="text/javascript">
|
|
var MINIMUM_RATING_TIME = 10
|
|
$('#qcslider').on('input', function() {
|
|
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
$('#qcslider-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)bg-\S+/g) || []).join(' ');
|
|
});
|
|
$('#qcslider-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)text-\S+/g) || []).join(' ');
|
|
});
|
|
|
|
if ( $(this).val() < 1.5 ) {
|
|
$('#qcslider-collapse .list-group-item-danger').addClass('bg-danger text-white');
|
|
} else if ( $(this).val() > 3.5 ) {
|
|
$('#qcslider-collapse .list-group-item-success').addClass('bg-success text-white');
|
|
} else if ( $(this).val() < 2.5 ) {
|
|
$('#qcslider-collapse .list-group-item-warning').addClass('bg-warning text-dark');
|
|
} else {
|
|
$('#qcslider-collapse .list-group-item-primary').addClass('bg-primary text-white');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
$('#qcextra-confidence').on('input', function() {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
$('#qcextra-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)bg-\S+/g) || []).join(' ');
|
|
});
|
|
$('#qcextra-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)text-\S+/g) || []).join(' ');
|
|
});
|
|
|
|
if ( $(this).val() < 2.0 ) {
|
|
$('#qcextra-collapse .list-group-item-warning').addClass('bg-warning text-dark');
|
|
} else {
|
|
$('#qcextra-collapse .list-group-item-success').addClass('bg-success text-white');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
|
|
$('#qcextra-comments').bind('input propertychange', function() {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
});
|
|
|
|
$( '#btn-post' ).click( function() {
|
|
var payload = read_form();
|
|
var md5sum = "unspecified";
|
|
var params = {
|
|
'rating': payload['rating'],
|
|
'md5sum': md5sum,
|
|
'name': "",
|
|
'comment': JSON.stringify(payload['artifacts'])
|
|
};
|
|
|
|
// disable development releases
|
|
var authorization = $(this).val();
|
|
var ratingReq = new XMLHttpRequest();
|
|
ratingReq.open("POST", "https://mriqc.nimh.nih.gov:443/api/v1/rating");
|
|
ratingReq.setRequestHeader("Content-Type", "application/json;charset=UTF-8");
|
|
ratingReq.setRequestHeader("Authorization", authorization);
|
|
ratingReq.onload = function () {
|
|
status = ratingReq.status;
|
|
$('#btn-post').removeClass('btn-primary');
|
|
$('#btn-post').attr('disabled', true);
|
|
$('#btn-post').attr('aria-disabled', true);
|
|
$('#btn-post').prop('disabled');
|
|
$('#btn-post').addClass('disabled');
|
|
$('#btn-post').removeClass('active');
|
|
if (status === "201") {
|
|
$('#btn-post').addClass('btn-success');
|
|
$('#btn-post').html('Posted!');
|
|
} else {
|
|
$('#btn-post').addClass('btn-danger');
|
|
$('#btn-post').html('Failed');
|
|
};
|
|
};
|
|
ratingReq.send(JSON.stringify(params));
|
|
});
|
|
|
|
$( 'body' ).on( 'click', '#qcartifacts-group input', function(e) {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
$( 'body' ).on( 'click', '#qcrating-toggler', function(e) {
|
|
toggle_rating();
|
|
});
|
|
</script>
|
|
</div>
|
|
|
|
<script type="text/javascript">
|
|
function toggle(id) {
|
|
var element = document.getElementById(id);
|
|
if(element.style.display == 'block')
|
|
element.style.display = 'none';
|
|
else
|
|
element.style.display = 'block';
|
|
}
|
|
</script>
|
|
</body>
|
|
</html> |