614 lines
No EOL
44 KiB
HTML
614 lines
No EOL
44 KiB
HTML
<?xml version="1.0" encoding="utf-8" ?>
|
|
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
|
|
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
|
|
<head>
|
|
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
|
|
<meta name="generator" content="NiReports: https://www.nipreps.org/" />
|
|
<title>sub-8007_ses-01_task-RDMmotion_run-04_bold :: MRIQC's BOLD fMRI report</title>
|
|
<script src="https://code.jquery.com/jquery-3.6.0.min.js" integrity="sha256-/xUj+3OJU5yExlq6GSYGSHk7tPXikynS7ogEvDej/m4=" crossorigin="anonymous"></script>
|
|
<link href="https://cdn.jsdelivr.net/npm/bootstrap@5.2.3/dist/css/bootstrap.min.css" rel="stylesheet" integrity="sha384-rbsA2VBKQhggwzxH7pPCaAqO46MgnOM80zW1RWuH61DGLwZJEdK2Kadq2F9CUG65" crossorigin="anonymous">
|
|
<script src="https://cdn.jsdelivr.net/npm/bootstrap@5.2.3/dist/js/bootstrap.bundle.min.js" integrity="sha384-kenU1KFdBIe4zVF0s0G1M5b4hcpxyD9F7jL+jjXkk+Q2h455rYXK/7HAuoJl+0I4" crossorigin="anonymous"></script>
|
|
|
|
<script>
|
|
var timestamp = Date.now()
|
|
|
|
function read_form() {
|
|
var ds = "<unset>";
|
|
var sub = "sub-8007_ses-01_task-RDMmotion_run-04_bold.nii.gz";
|
|
|
|
var artifacts = [];
|
|
$('#qcartifacts-group input:checked').each(function() {
|
|
artifacts.push($(this).attr('name'));
|
|
});
|
|
|
|
var rating = $('#qcslider').val();
|
|
var payload = {
|
|
'dataset': ds,
|
|
'subject': sub,
|
|
'rating': rating,
|
|
'artifacts': artifacts,
|
|
'time_sec': (Date.now() - timestamp) / 1000,
|
|
'confidence': $('#qcextra-confidence').val(),
|
|
'comments': $('#qcextra-comments').val()
|
|
};
|
|
|
|
var file = new Blob([JSON.stringify(payload)], {type: 'text/json'});
|
|
$('#btn-download').attr('href', URL.createObjectURL(file));
|
|
$('#btn-download').attr('download', payload['dataset'] + "_" + payload['subject'] + ".json");
|
|
return payload
|
|
};
|
|
|
|
function toggle_rating() {
|
|
if ($('#qcrating-menu').hasClass('d-none')) {
|
|
$('#qcrating-menu').removeClass('d-none');
|
|
$('#qcrating-toggler').prop('checked', true);
|
|
} else {
|
|
$('#qcrating-menu').addClass('d-none');
|
|
$('#qcrating-toggler').prop('checked', false);
|
|
}
|
|
};
|
|
|
|
$(window).on('load',function(){
|
|
var authorization = $('#btn-post').val()
|
|
if (authorization.includes("secret_token")) {
|
|
$('#btn-post').addClass('d-none');
|
|
};
|
|
timestamp = Date.now();
|
|
});
|
|
|
|
</script>
|
|
<style type="text/css">
|
|
/* The slider itself */
|
|
.slider {
|
|
-webkit-appearance: none; /* Override default CSS styles */
|
|
appearance: none;
|
|
margin-bottom: 8px;
|
|
margin-left: 10%;
|
|
width: 80%;
|
|
height: 5px; /* Specified height */
|
|
background: #d3d3d3; /* Grey background */
|
|
outline: none; /* Remove outline */
|
|
opacity: 0.7; /* Set transparency (for mouse-over effects on hover) */
|
|
-webkit-transition: .2s; /* 0.2 seconds transition on hover */
|
|
transition: opacity .2s;
|
|
}
|
|
|
|
/* Mouse-over effects */
|
|
.slider:hover {
|
|
opacity: 1; /* Fully shown on mouse-over */
|
|
}
|
|
|
|
.slider::-webkit-slider-thumb {
|
|
-webkit-appearance: none;
|
|
appearance: none;
|
|
width: 25px;
|
|
height: 25px;
|
|
border: 0;
|
|
background: url('https://raw.githubusercontent.com/nipreps/nireports/main/assets/slider-handle.png');
|
|
cursor: pointer;
|
|
z-index: 2000 !important;
|
|
}
|
|
|
|
.slider::-moz-range-thumb {
|
|
width: 25px;
|
|
height: 25px;
|
|
border: 0;
|
|
background: url('https://raw.githubusercontent.com/nipreps/nireports/main/assets/slider-handle.png');
|
|
cursor: pointer;
|
|
z-index: 2000 !important;
|
|
}
|
|
|
|
</style>
|
|
</head>
|
|
<body style="font-family: helvetica;">
|
|
<nav class="navbar fixed-top navbar-expand-lg bg-light">
|
|
<div class="container-fluid">
|
|
<div class="collapse navbar-collapse" id="navbarSupportedContent">
|
|
<ul class="navbar-nav me-auto mb-2 mb-lg-0">
|
|
<li class="nav-item"><a class="nav-link" href="#Basic echo-wise reports">Basic echo-wise reports</a></li>
|
|
<li class="nav-item"><a class="nav-link" href="#Extended echo-wise reports">Extended echo-wise reports</a></li>
|
|
<li class="nav-item"><a class="nav-link" href="#Extended reports shared across echos">Extended reports shared across echos</a></li>
|
|
<li class="nav-item dropdown">
|
|
<a class="nav-link dropdown-toggle" id="navbarAbout" role="button" data-bs-toggle="dropdown" aria-expanded="false" href="#About">
|
|
About
|
|
</a>
|
|
<ul class="dropdown-menu">
|
|
<li><a class="dropdown-item" href="#errors">Errors</a></li>
|
|
<li><a class="dropdown-item" href="#meta-about-metadata">Reproducibility and provenance information</a></li>
|
|
</ul>
|
|
</li>
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
<div class="d-flex flex-row-reverse">
|
|
<div class="form-check form-switch align-self-center flex-fill me-4">
|
|
<input class="form-check-input" type="checkbox" id="qcrating-toggler"></input>
|
|
<label class="form-check-label" style="width: 100pt;" for="qcrating-toggler">Rating widget</label>
|
|
</div>
|
|
</div>
|
|
</nav>
|
|
<noscript>
|
|
<h1 class="text-danger"> The navigation menu uses Javascript. Without it this report might not work as expected </h1>
|
|
</noscript>
|
|
|
|
<div id="Basic echo-wise reports" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">Basic echo-wise reports</h1>
|
|
<div id="datatype-figures_desc-stdev_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Standard deviation of signal through time</h3><p class="elem-caption">The voxel-wise standard deviation of the signal (variability along time).</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-stdev_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-stdev_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-stdev_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-background_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">View of the background of the voxel-wise average of the BOLD timeseries</h3><p class="elem-caption">This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-background_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-background_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-background_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-zoomed_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Voxel-wise average of BOLD time-series, zoomed-in covering just the brain</h3><p class="elem-caption">This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-zoomed_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-zoomed_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-zoomed_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-carpet_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Carpetplot and nuisance signals</h3><p class="elem-caption">The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-carpet_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-carpet_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-carpet_bold.svg</a></small>
|
|
|
|
</div>
|
|
</div>
|
|
<div id="Extended echo-wise reports" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">Extended echo-wise reports</h1>
|
|
<div id="datatype-figures_desc-mean_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Voxel-wise average of BOLD time-series</h3><p class="elem-caption">The average signal calculated across the last axis (time).</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-mean_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-mean_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-mean_bold.svg</a></small>
|
|
|
|
</div>
|
|
</div>
|
|
<div id="Extended reports shared across echos" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">Extended reports shared across echos</h1>
|
|
<div id="datatype-figures_desc-brainmask_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Brain extraction performance</h3><p class="elem-caption">Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.</p> <div class="reportlet">
|
|
<img class="svg-reportlet" src="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-brainmask_bold.svg" style="width: 100%" />
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-brainmask_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-brainmask_bold.svg</a></small>
|
|
|
|
</div>
|
|
<div id="datatype-figures_desc-norm_run-04_session-01_subject-8007_suffix-bold_task-RDMmotion" class="ps-4 pe-4 mb-2">
|
|
<h3 class="run-title mt-3">Spatial normalization of the anatomical image</h3><p class="elem-caption">This panel shows a <em>quick-and-dirty</em> nonlinear registration into the <code>MNI152NLin2009cAsym</code> template accessed with <a href="https://templateflow.org/browse" target="_blank"><em>TemplateFlow</em></a>.</p> <div class="reportlet">
|
|
<object class="svg-reportlet" type="image/svg+xml" data="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-norm_bold.svg" style="">
|
|
Problem loading figure sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.</object>
|
|
</div>
|
|
<small>Get figure file: <a href="./sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-norm_bold.svg" target="_blank">sub-8007/figures/sub-8007_ses-01_task-RDMmotion_run-04_desc-norm_bold.svg</a></small>
|
|
|
|
</div>
|
|
</div>
|
|
<div id="About" class="mt-5">
|
|
<h1 class="sub-report-title pt-5 ps-4">About</h1>
|
|
<div id="errors" class="ps-4 pe-4 mb-2">
|
|
<h2 class="sub-report-group mt-4">Errors</h2> <p class="alert alert-success" role="alert">No errors to report!</p>
|
|
</div>
|
|
<div id="meta-about-metadata" class="ps-4 pe-4 mb-2">
|
|
<h2 class="sub-report-group mt-4">Reproducibility and provenance information</h2><p class="elem-caption">Thanks for using <em>MRIQC</em>. The following information may assist in
|
|
reconstructing the provenance of the corresponding derivatives.
|
|
</p> <div class="accordion accordion-flush" id="about-metadata">
|
|
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="about-metadata-0">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-0-collapse" aria-controls="about-metadata-0-collapse">
|
|
Provenance Information
|
|
</button>
|
|
</h2>
|
|
<div id="about-metadata-0-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-0-heading" data-bs-parent="#about-metadata-0">
|
|
<div class="accordion-body metadata-table">
|
|
<table id="about-metadata-table-0" class="table table-sm table-striped">
|
|
<tr><td colspan=2>Execution environment</td><td>singularity</td></tr>
|
|
<tr><td colspan=2>Input filename</td><td><BIDS root>/sub-8007/ses-01/func/sub-8007_ses-01_task-RDMmotion_run-04_bold.nii.gz</td></tr>
|
|
<tr><td>Versions</td><td>MRIQC</td><td>24.1.0.dev0+gd5b13cb5.d20240826</td></tr>
|
|
<tr><td>Versions</td><td>NiPype</td><td>1.8.6</td></tr>
|
|
<tr><td>Versions</td><td>TemplateFlow</td><td>24.2.0</td></tr>
|
|
<tr><td colspan=2>md5sum</td><td>7a1d10224537d2b70e1e7b8eaa66c8b2</td></tr>
|
|
</table>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="about-metadata-1">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-1-collapse" aria-controls="about-metadata-1-collapse">
|
|
Dataset Information
|
|
</button>
|
|
</h2>
|
|
<div id="about-metadata-1-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-1-heading" data-bs-parent="#about-metadata-1">
|
|
<div class="accordion-body metadata-table">
|
|
<table id="about-metadata-table-1" class="table table-sm table-striped">
|
|
<tr><td colspan=2>AcquisitionMatrixPE</td><td>88</td></tr>
|
|
<tr><td colspan=2>AcquisitionNumber</td><td>1</td></tr>
|
|
<tr><td colspan=2>AcquisitionTime</td><td>15:56:24.307500</td></tr>
|
|
<tr><td colspan=2>BandwidthPerPixelPhaseEncode</td><td>19.592</td></tr>
|
|
<tr><td colspan=2>BaseResolution</td><td>88</td></tr>
|
|
<tr><td colspan=2>BodyPartExamined</td><td>BRAIN</td></tr>
|
|
<tr><td colspan=2>ConsistencyInfo</td><td>N4_VE11C_LATEST_20160120</td></tr>
|
|
<tr><td colspan=2>ConversionSoftware</td><td>dcm2niix</td></tr>
|
|
<tr><td colspan=2>ConversionSoftwareVersion</td><td>v1.0.20190902</td></tr>
|
|
<tr><td colspan=2>DerivedVendorReportedEchoSpacing</td><td>0.000580014</td></tr>
|
|
<tr><td colspan=2>DeviceSerialNumber</td><td>67050</td></tr>
|
|
<tr><td colspan=2>DwellTime</td><td>2.6e-06</td></tr>
|
|
<tr><td colspan=2>EchoTime</td><td>0.033</td></tr>
|
|
<tr><td colspan=2>EchoTrainLength</td><td>88</td></tr>
|
|
<tr><td colspan=2>EffectiveEchoSpacing</td><td>0.000580014</td></tr>
|
|
<tr><td colspan=2>FlipAngle</td><td>62</td></tr>
|
|
<tr><td colspan=2>ImageOrientationPatientDICOM</td><td>[0.998846, 0.0440895, -0.0190532, -0.0465803, 0.985949, -0.16042]</td></tr>
|
|
<tr><td colspan=2>ImageType</td><td>['ORIGINAL', 'PRIMARY', 'M', 'ND', 'MOSAIC']</td></tr>
|
|
<tr><td colspan=2>ImagingFrequency</td><td>123.25</td></tr>
|
|
<tr><td colspan=2>InPlanePhaseEncodingDirectionDICOM</td><td>COL</td></tr>
|
|
<tr><td colspan=2>InstitutionAddress</td><td>Olive_Street_60_Providence_RI_US_02912</td></tr>
|
|
<tr><td colspan=2>InstitutionName</td><td>BROWN_UNIVERSITY_MRF</td></tr>
|
|
<tr><td colspan=2>InstitutionalDepartmentName</td><td>Department</td></tr>
|
|
<tr><td colspan=2>MRAcquisitionType</td><td>2D</td></tr>
|
|
<tr><td colspan=2>MagneticFieldStrength</td><td>3</td></tr>
|
|
<tr><td colspan=2>Manufacturer</td><td>Siemens</td></tr>
|
|
<tr><td colspan=2>ManufacturersModelName</td><td>Prisma_fit</td></tr>
|
|
<tr><td colspan=2>Modality</td><td>MR</td></tr>
|
|
<tr><td colspan=2>MultibandAccelerationFactor</td><td>4</td></tr>
|
|
<tr><td colspan=2>PartialFourier</td><td>1</td></tr>
|
|
<tr><td colspan=2>PatientPosition</td><td>HFS</td></tr>
|
|
<tr><td colspan=2>PercentPhaseFOV</td><td>100</td></tr>
|
|
<tr><td colspan=2>PhaseEncodingDirection</td><td>j-</td></tr>
|
|
<tr><td colspan=2>PhaseEncodingSteps</td><td>88</td></tr>
|
|
<tr><td colspan=2>PhaseResolution</td><td>1</td></tr>
|
|
<tr><td colspan=2>PixelBandwidth</td><td>2185</td></tr>
|
|
<tr><td colspan=2>ProcedureStepDescription</td><td>ASHENHAV_1222</td></tr>
|
|
<tr><td colspan=2>ProtocolName</td><td>func-bold_task-RDMmotion_run-04</td></tr>
|
|
<tr><td colspan=2>PulseSequenceDetails</td><td>%SiemensSeq%_ep2d_bold</td></tr>
|
|
<tr><td colspan=2>ReceiveCoilActiveElements</td><td>HC1-7;NC1</td></tr>
|
|
<tr><td colspan=2>ReceiveCoilName</td><td>HeadNeck_64</td></tr>
|
|
<tr><td colspan=2>ReconMatrixPE</td><td>88</td></tr>
|
|
<tr><td colspan=2>RefLinesPE</td><td>8</td></tr>
|
|
<tr><td colspan=2>RepetitionTime</td><td>1.2</td></tr>
|
|
<tr><td colspan=2>SAR</td><td>0.0442336</td></tr>
|
|
<tr><td colspan=2>ScanOptions</td><td>FS</td></tr>
|
|
<tr><td colspan=2>ScanningSequence</td><td>EP</td></tr>
|
|
<tr><td colspan=2>SequenceName</td><td>_epfid2d1_88</td></tr>
|
|
<tr><td colspan=2>SequenceVariant</td><td>SK</td></tr>
|
|
<tr><td colspan=2>SeriesDescription</td><td>func-bold_task-RDMmotion_run-04</td></tr>
|
|
<tr><td colspan=2>SeriesNumber</td><td>13</td></tr>
|
|
<tr><td colspan=2>ShimSetting</td><td>[1747, -9098, 4389, 591, -72, -377, -51, -2]</td></tr>
|
|
<tr><td colspan=2>SliceThickness</td><td>2.4</td></tr>
|
|
<tr><td colspan=2>SliceTiming</td><td>[0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025, 0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025, 0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025, 0.5525, 0, 0.63, 0.08, 0.71, 0.1575, 0.7875, 0.2375, 0.8675, 0.315, 0.945, 0.395, 1.0225, 0.4725, 1.1025]</td></tr>
|
|
<tr><td colspan=2>SoftwareVersions</td><td>syngo_MR_E11</td></tr>
|
|
<tr><td colspan=2>SpacingBetweenSlices</td><td>2.4</td></tr>
|
|
<tr><td colspan=2>StationName</td><td>AWP67050</td></tr>
|
|
<tr><td colspan=2>TaskName</td><td>RDMmotion</td></tr>
|
|
<tr><td colspan=2>TotalReadoutTime</td><td>0.0504612</td></tr>
|
|
<tr><td colspan=2>TxRefAmp</td><td>219.976</td></tr>
|
|
<tr><td>dcmmeta</td><td>affine</td><td>[[-2.3949599266052246, -0.11168679594993591, -0.028110405430197716, 111.6758041381836], [-0.1057145819067955, 2.364037275314331, -0.3866933584213257, -82.14633178710938], [-0.04568440839648247, 0.3846430778503418, 2.368475914001465, -82.95899200439453], [0.0, 0.0, 0.0, 1.0]]</td></tr>
|
|
<tr><td>dcmmeta</td><td>reorient_transform</td><td>[[0.0, -1.0, 0.0, 87.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]</td></tr>
|
|
<tr><td>dcmmeta</td><td>shape</td><td>[88, 88, 60, 125]</td></tr>
|
|
<tr><td>dcmmeta</td><td>slice_dim</td><td>2</td></tr>
|
|
<tr><td>dcmmeta</td><td>version</td><td>0.6</td></tr>
|
|
<tr><td colspan=2>time</td><td>{'samples': {'AcquisitionNumber': [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125], 'AcquisitionTime': ['155624.307500', '155625.507500', '155626.707500', '155627.907500', '155629.107500', '155630.307500', '155631.507500', '155632.707500', '155633.907500', '155635.107500', '155636.307500', '155637.507500', '155638.707500', '155639.907500', '155641.107500', '155642.307500', '155643.507500', '155644.707500', '155645.907500', '155647.107500', '155648.307500', '155649.507500', '155650.707500', '155651.907500', '155653.107500', '155654.307500', '155655.507500', '155656.707500', '155657.907500', '155659.107500', '155700.307500', '155701.507500', '155702.707500', '155703.907500', '155705.107500', '155706.307500', '155707.507500', '155708.707500', '155709.907500', '155711.107500', '155712.307500', '155713.507500', '155714.707500', '155715.907500', '155717.107500', '155718.307500', '155719.507500', '155720.707500', '155721.907500', '155723.107500', '155724.307500', '155725.507500', '155726.707500', '155727.907500', '155729.107500', '155730.307500', '155731.507500', '155732.707500', '155733.907500', '155735.107500', '155736.307500', '155737.507500', '155738.707500', '155739.907500', '155741.107500', '155742.307500', '155743.507500', '155744.707500', '155745.907500', '155747.107500', '155748.307500', '155749.507500', '155750.707500', '155751.907500', '155753.107500', '155754.307500', '155755.507500', '155756.707500', '155757.907500', '155759.107500', '155800.307500', '155801.507500', '155802.707500', '155803.907500', '155805.107500', '155806.307500', '155807.507500', '155808.707500', '155809.907500', '155811.107500', '155812.307500', '155813.507500', '155814.707500', '155815.907500', '155817.107500', '155818.307500', '155819.507500', '155820.707500', '155821.907500', '155823.107500', '155824.307500', '155825.507500', '155826.707500', '155827.907500', '155829.107500', '155830.307500', '155831.507500', '155832.707500', '155833.907500', '155835.107500', '155836.307500', '155837.507500', '155838.707500', '155839.907500', '155841.107500', '155842.307500', '155843.507500', '155844.707500', '155845.907500', '155847.107500', '155848.307500', '155849.507500', '155850.707500', '155851.907500', '155853.107500'], 'ContentTime': ['155700.131000', '155700.134000', '155700.136000', '155700.139000', '155700.153000', '155700.156000', '155700.158000', '155700.161000', '155700.163000', '155700.166000', '155700.168000', '155700.171000', '155700.181000', '155700.184000', '155700.187000', '155700.189000', '155700.192000', '155700.195000', '155700.198000', '155700.200000', '155700.203000', '155700.206000', '155700.208000', '155700.211000', '155700.213000', '155700.216000', '155700.218000', '155700.221000', '155700.224000', '155740.128000', '155740.130000', '155740.133000', '155740.135000', '155740.138000', '155740.141000', '155740.143000', '155740.146000', '155740.148000', '155740.151000', '155740.153000', '155740.156000', '155740.159000', '155740.161000', '155740.164000', '155740.166000', '155740.175000', '155740.178000', '155740.180000', '155740.183000', '155740.186000', '155740.188000', '155740.191000', '155740.193000', '155740.196000', '155740.199000', '155740.202000', '155740.205000', '155740.207000', '155740.210000', '155740.213000', '155740.215000', '155740.218000', '155820.127000', '155820.129000', '155820.132000', '155820.135000', '155820.137000', '155820.140000', '155820.142000', '155820.145000', '155820.147000', '155820.150000', '155820.153000', '155820.155000', '155820.158000', '155820.160000', '155820.163000', '155820.166000', '155820.168000', '155820.171000', '155820.173000', '155820.176000', '155820.178000', '155820.181000', '155820.184000', '155820.186000', '155820.189000', '155820.191000', '155820.194000', '155820.196000', '155820.202000', '155820.205000', '155820.208000', '155820.210000', '155820.213000', '155820.215000', '155854.654000', '155854.657000', '155854.660000', '155854.663000', '155854.665000', '155854.668000', '155854.671000', '155854.673000', '155854.676000', '155854.679000', '155854.681000', '155854.684000', '155854.687000', '155854.689000', '155854.692000', '155854.695000', '155854.700000', '155854.703000', '155854.706000', '155854.708000', '155854.711000', '155854.714000', '155854.717000', '155854.719000', '155854.722000', '155854.725000', '155854.728000', '155854.732000', '155854.738000'], 'InstanceCreationTime': ['155700.131000', '155700.134000', '155700.136000', '155700.139000', '155700.153000', '155700.156000', '155700.158000', '155700.161000', '155700.163000', '155700.166000', '155700.168000', '155700.171000', '155700.181000', '155700.184000', '155700.187000', '155700.189000', '155700.192000', '155700.195000', '155700.198000', '155700.200000', '155700.203000', '155700.206000', '155700.208000', '155700.211000', '155700.213000', '155700.216000', '155700.218000', '155700.221000', '155700.224000', '155740.128000', '155740.130000', '155740.133000', '155740.135000', '155740.138000', '155740.141000', '155740.143000', '155740.146000', '155740.148000', '155740.151000', '155740.153000', '155740.156000', '155740.159000', '155740.161000', '155740.164000', '155740.166000', '155740.175000', '155740.178000', '155740.180000', '155740.183000', '155740.186000', '155740.188000', '155740.191000', '155740.193000', '155740.196000', '155740.199000', '155740.202000', '155740.205000', '155740.207000', '155740.210000', '155740.213000', '155740.215000', '155740.218000', '155820.127000', '155820.129000', '155820.132000', '155820.135000', '155820.137000', '155820.140000', '155820.142000', '155820.145000', '155820.147000', '155820.150000', '155820.153000', '155820.155000', '155820.158000', '155820.160000', '155820.163000', '155820.166000', '155820.168000', '155820.171000', '155820.173000', '155820.176000', '155820.178000', '155820.181000', '155820.184000', '155820.186000', '155820.189000', '155820.191000', '155820.194000', '155820.196000', '155820.202000', '155820.205000', '155820.208000', '155820.210000', '155820.213000', '155820.215000', '155854.654000', '155854.657000', '155854.660000', '155854.663000', '155854.665000', '155854.668000', '155854.671000', '155854.673000', '155854.676000', '155854.679000', '155854.681000', '155854.684000', '155854.687000', '155854.689000', '155854.692000', '155854.695000', '155854.700000', '155854.703000', '155854.706000', '155854.708000', '155854.711000', '155854.714000', '155854.717000', '155854.719000', '155854.722000', '155854.725000', '155854.728000', '155854.732000', '155854.738000'], 'InstanceNumber': [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125], 'LargestImagePixelValue': [2008, 1933, 1907, 1903, 1864, 1886, 1908, 1889, 1886, 1883, 1881, 1885, 1910, 1887, 1894, 1878, 1903, 1916, 1875, 1878, 1906, 1849, 1920, 1887, 1908, 1906, 1866, 1906, 1889, 1896, 1938, 1886, 1933, 1924, 1892, 1920, 1891, 1872, 1951, 1892, 1935, 1910, 1879, 1928, 1902, 1926, 1925, 1896, 1929, 1878, 1906, 1915, 1906, 1933, 1862, 1924, 1878, 1895, 1963, 1888, 1947, 1909, 1924, 1922, 1862, 1927, 1897, 1902, 1941, 1881, 1923, 1869, 1898, 1956, 1887, 1950, 1899, 1933, 1966, 1910, 1961, 1884, 1900, 1963, 1890, 1944, 1880, 1898, 1903, 1908, 1958, 1889, 1925, 1903, 1877, 1955, 1911, 1951, 1895, 1879, 1949, 1875, 1911, 1900, 1898, 1923, 1883, 1883, 1934, 1883, 1893, 1940, 1897, 1918, 1920, 1914, 1937, 1910, 1944, 1960, 1905, 1885, 1913, 1866, 1858], 'WindowCenter': [593.0, 591.0, 589.0, 589.0, 588.0, 589.0, 589.0, 588.0, 588.0, 589.0, 589.0, 590.0, 591.0, 591.0, 591.0, 591.0, 591.0, 592.0, 591.0, 591.0, 592.0, 591.0, 593.0, 592.0, 593.0, 593.0, 592.0, 593.0, 593.0, 593.0, 594.0, 593.0, 594.0, 593.0, 593.0, 593.0, 593.0, 593.0, 594.0, 593.0, 593.0, 593.0, 592.0, 593.0, 592.0, 593.0, 593.0, 593.0, 593.0, 592.0, 593.0, 593.0, 592.0, 593.0, 592.0, 593.0, 593.0, 593.0, 594.0, 592.0, 594.0, 593.0, 594.0, 593.0, 593.0, 594.0, 593.0, 594.0, 594.0, 593.0, 594.0, 593.0, 594.0, 594.0, 593.0, 595.0, 594.0, 595.0, 595.0, 594.0, 594.0, 593.0, 593.0, 594.0, 593.0, 593.0, 592.0, 592.0, 592.0, 593.0, 593.0, 592.0, 594.0, 593.0, 593.0, 594.0, 594.0, 595.0, 593.0, 593.0, 593.0, 592.0, 594.0, 593.0, 593.0, 594.0, 593.0, 593.0, 593.0, 592.0, 593.0, 594.0, 593.0, 594.0, 593.0, 594.0, 594.0, 594.0, 595.0, 595.0, 593.0, 591.0, 592.0, 592.0, 593.0], 'WindowWidth': [1265.0, 1260.0, 1256.0, 1256.0, 1256.0, 1257.0, 1257.0, 1256.0, 1255.0, 1257.0, 1258.0, 1260.0, 1262.0, 1261.0, 1262.0, 1261.0, 1261.0, 1263.0, 1261.0, 1262.0, 1263.0, 1262.0, 1266.0, 1264.0, 1265.0, 1265.0, 1264.0, 1266.0, 1265.0, 1267.0, 1268.0, 1267.0, 1268.0, 1266.0, 1265.0, 1266.0, 1266.0, 1265.0, 1266.0, 1265.0, 1266.0, 1265.0, 1264.0, 1265.0, 1264.0, 1265.0, 1265.0, 1265.0, 1266.0, 1265.0, 1265.0, 1265.0, 1264.0, 1265.0, 1264.0, 1266.0, 1265.0, 1266.0, 1267.0, 1265.0, 1266.0, 1265.0, 1267.0, 1266.0, 1265.0, 1267.0, 1266.0, 1267.0, 1268.0, 1266.0, 1267.0, 1265.0, 1267.0, 1268.0, 1267.0, 1270.0, 1268.0, 1269.0, 1269.0, 1267.0, 1268.0, 1265.0, 1266.0, 1267.0, 1265.0, 1266.0, 1264.0, 1264.0, 1264.0, 1264.0, 1266.0, 1264.0, 1267.0, 1265.0, 1266.0, 1267.0, 1267.0, 1269.0, 1266.0, 1266.0, 1265.0, 1264.0, 1267.0, 1266.0, 1267.0, 1267.0, 1265.0, 1265.0, 1266.0, 1265.0, 1265.0, 1267.0, 1266.0, 1267.0, 1266.0, 1267.0, 1268.0, 1268.0, 1269.0, 1269.0, 1265.0, 1262.0, 1263.0, 1264.0, 1266.0]}, 'slices': {}}</td></tr>
|
|
</table>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="about-metadata-2">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-2-collapse" aria-controls="about-metadata-2-collapse">
|
|
Extracted Image quality metrics (IQMs)
|
|
</button>
|
|
</h2>
|
|
<div id="about-metadata-2-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-2-heading" data-bs-parent="#about-metadata-2">
|
|
<div class="accordion-body metadata-table">
|
|
<table id="about-metadata-table-2" class="table table-sm table-striped">
|
|
<tr><td colspan=3>aor</td><td>0.00149296</td></tr>
|
|
<tr><td colspan=3>aqi</td><td>0.0028255673600000005</td></tr>
|
|
<tr><td colspan=3>dummy_trs</td><td>0</td></tr>
|
|
<tr><td>dvars</td><td colspan=2>nstd</td><td>32.70185222943548</td></tr>
|
|
<tr><td>dvars</td><td colspan=2>std</td><td>1.1531148595967748</td></tr>
|
|
<tr><td>dvars</td><td colspan=2>vstd</td><td>1.0108587848387096</td></tr>
|
|
<tr><td colspan=3>efc</td><td>0.519</td></tr>
|
|
<tr><td colspan=3>fber</td><td>679.7293</td></tr>
|
|
<tr><td>fd</td><td colspan=2>mean</td><td>0.18042276464171902</td></tr>
|
|
<tr><td>fd</td><td colspan=2>num</td><td>56</td></tr>
|
|
<tr><td>fd</td><td colspan=2>perc</td><td>44.8</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>avg</td><td>3.3146020983337032</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>x</td><td>3.226046664233155</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>y</td><td>3.3278805988029787</td></tr>
|
|
<tr><td>fwhm</td><td colspan=2>z</td><td>3.389879031964976</td></tr>
|
|
<tr><td colspan=3>gcor</td><td>0.010808</td></tr>
|
|
<tr><td>gsr</td><td colspan=2>x</td><td>-0.012085809372365475</td></tr>
|
|
<tr><td>gsr</td><td colspan=2>y</td><td>0.07736865431070328</td></tr>
|
|
<tr><td>size</td><td colspan=2>t</td><td>125</td></tr>
|
|
<tr><td>size</td><td colspan=2>x</td><td>88</td></tr>
|
|
<tr><td>size</td><td colspan=2>y</td><td>88</td></tr>
|
|
<tr><td>size</td><td colspan=2>z</td><td>60</td></tr>
|
|
<tr><td colspan=3>snr</td><td>2.1850532737065382</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>tr</td><td>1.2000000476837158</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>x</td><td>2.3977272510528564</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>y</td><td>2.3977272510528564</td></tr>
|
|
<tr><td>spacing</td><td colspan=2>z</td><td>2.4000000953674316</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>k</td><td>40.125</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>mad</td><td>10.7222</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>mean</td><td>48.6449</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>median</td><td>21.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>n</td><td>358825.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>p05</td><td>12.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>p95</td><td>178.0</td></tr>
|
|
<tr><td>summary</td><td>bg</td><td>stdv</td><td>81.8246</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>k</td><td>0.7994</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>mad</td><td>215.179</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>mean</td><td>573.3459</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>median</td><td>542.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>n</td><td>105815.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>p05</td><td>206.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>p95</td><td>1040.0</td></tr>
|
|
<tr><td>summary</td><td>fg</td><td>stdv</td><td>248.0477</td></tr>
|
|
<tr><td colspan=3>tsnr</td><td>56.41266809031367</td></tr>
|
|
</table>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<div id="qcrating-menu" class="card position-fixed d-none" style="width: 30%; top: 100px; left: 65%; max-height: 85%; overflow-y: auto;">
|
|
<div class="card-header m-0">
|
|
Rating widget
|
|
<button type="button" class="btn-close position-absolute top-0 end-0" aria-label="Close" id="close-qcrating-menu" onclick="toggle_rating()" style="margin: 10px 10px 0 0"></button>
|
|
</div>
|
|
<div class="card-body">
|
|
<div class="accordion">
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcslider-head">
|
|
<button class="accordion-button" type="button" data-bs-toggle="collapse" data-bs-target="#qcslider-collapse" aria-expanded="true" aria-controls="qcslider-collapse">Overall Quality Rating</button>
|
|
</h2>
|
|
<div id="qcslider-collapse" class="accordion-collapse collapse show" aria-labelledby="qcslider-head">
|
|
<div class="accordion-body">
|
|
<input type="range" min="1.0" max="4.0" step="0.05" value="2.5" id="qcslider" class="slider">
|
|
<ul class="list-group list-group-horizontal slider-labels" style="width: 100%">
|
|
<li class="list-group-item list-group-item-danger small" style="font-size: 0.7em; width: 25%; text-align:center">Exclude</li>
|
|
<li class="list-group-item list-group-item-warning small" style="font-size: 0.7em; width: 25%; text-align:center">Poor</li>
|
|
<li class="list-group-item list-group-item-primary small" style="font-size: 0.7em; width: 25%; text-align:center">Acceptable</li>
|
|
<li class="list-group-item list-group-item-success small" style="font-size: 0.7em; width: 25%; text-align:center">Excellent</li>
|
|
</ul>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcartifacts-head">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#qcartifacts-collapse" aria-expanded="false" aria-controls="qcartifacts-collapse">
|
|
Record specific artifacts
|
|
</button>
|
|
</h2>
|
|
<div id="qcartifacts-collapse" class="accordion-collapse collapse" aria-labelledby="qcartifacts-head">
|
|
<div class="accordion-body">
|
|
<fieldset id="qcartifacts-group" class="form-group">
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="head-motion" id="qcartifacts-item-0" />
|
|
<label class="form-check-label" for="qcartifacts-item-0">Head motion artifacts</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="eye-spillover" id="qcartifacts-item-1" />
|
|
<label class="form-check-label" for="qcartifacts-item-1">Eye spillover through <abbr title="phase-encoding">PE</abbr> axis</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noneye-spillover" id="qcartifacts-item-2" />
|
|
<label class="form-check-label" for="qcartifacts-item-2">Non-eye spillover through <abbr title="phase-encoding">PE</abbr> axis</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="coil-failure" id="qcartifacts-item-3" />
|
|
<label class="form-check-label" for="qcartifacts-item-3">Coil failure</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noise-global" id="qcartifacts-item-4" />
|
|
<label class="form-check-label" for="qcartifacts-item-4">Global noise</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noise-local" id="qcartifacts-item-5" />
|
|
<label class="form-check-label" for="qcartifacts-item-5">Local noise</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="em-perturbation" id="qcartifacts-item-6" />
|
|
<label class="form-check-label" for="qcartifacts-item-6"><abbr title="electromagnetic">EM</abbr> interference/perturbation</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="wrap-around" id="qcartifacts-item-7" />
|
|
<label class="form-check-label" for="qcartifacts-item-7">Problematic <abbr title="field-of-view">FoV</abbr> prescription / wrap-around</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="ghost-aliasing" id="qcartifacts-item-8" />
|
|
<label class="form-check-label" for="qcartifacts-item-8">Aliasing ghosts</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="ghost-other" id="qcartifacts-item-9" />
|
|
<label class="form-check-label" for="qcartifacts-item-9">Other ghosts (for example, <abbr title="radiofrequency">RF</abbr> spoiling)</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="inu" id="qcartifacts-item-10" />
|
|
<label class="form-check-label" for="qcartifacts-item-10">Intensity non-uniformity (B<sub>1</sub> bias)</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="field-variation" id="qcartifacts-item-11" />
|
|
<label class="form-check-label" for="qcartifacts-item-11">Temporal B<sub>1</sub> field non-uniformity variation</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="processing" id="qcartifacts-item-12" />
|
|
<label class="form-check-label" for="qcartifacts-item-12">Processing such as denoising, defacing or resamplings happened</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="uncategorized" id="qcartifacts-item-13" />
|
|
<label class="form-check-label" for="qcartifacts-item-13">Other uncategorized artifact(s)</label>
|
|
</div>
|
|
</fieldset>
|
|
</div> <!-- accordion-body -->
|
|
</div> <!-- accordion-collapse -->
|
|
</div> <!-- accordion-item -->
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcextra-head">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#qcextra-collapse" aria-expanded="false" aria-controls="qcextra-collapse">
|
|
Extra details
|
|
</button>
|
|
</h2>
|
|
<div id="qcextra-collapse" class="accordion-collapse collapse" aria-labelledby="qcextra-head">
|
|
<div class="accordion-body">
|
|
<div class="input-group">
|
|
<span class="input-group-text">Comments</span>
|
|
<textarea class="form-control" aria-label="Comments" id="qcextra-comments"></textarea>
|
|
</div>
|
|
|
|
<p style="margin-top: 20px; font-weight: bold">Rater confidence</p>
|
|
<input type="range" min="0.0" max="4.0" step="0.05" value="3.5" id="qcextra-confidence" class="slider" style="margin-left: 22%;width: 56%;">
|
|
<ul class="list-group list-group-horizontal slider-labels" style="width: 100%">
|
|
<li class="list-group-item list-group-item-warning small" style="width: 50%; text-align:center">Doubtful</li>
|
|
<li class="list-group-item list-group-item-success bg-success text-white small" style="width: 50%; text-align:center">Confident</li>
|
|
</ul>
|
|
</div> <!-- accordion-body -->
|
|
</div> <!-- accordion-collapse -->
|
|
</div> <!-- accordion-item -->
|
|
</div>
|
|
<div style="margin-top: 10px">
|
|
<a class="btn btn-primary disabled" id="btn-download" href="">Download</a>
|
|
<button class="btn btn-primary" id="btn-post" value="8sSYVI0XjFqacEMZ8wF4" disabled>Share publicly</button>
|
|
</div>
|
|
<script type="text/javascript">
|
|
var MINIMUM_RATING_TIME = 10
|
|
$('#qcslider').on('input', function() {
|
|
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
$('#qcslider-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)bg-\S+/g) || []).join(' ');
|
|
});
|
|
$('#qcslider-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)text-\S+/g) || []).join(' ');
|
|
});
|
|
|
|
if ( $(this).val() < 1.5 ) {
|
|
$('#qcslider-collapse .list-group-item-danger').addClass('bg-danger text-white');
|
|
} else if ( $(this).val() > 3.5 ) {
|
|
$('#qcslider-collapse .list-group-item-success').addClass('bg-success text-white');
|
|
} else if ( $(this).val() < 2.5 ) {
|
|
$('#qcslider-collapse .list-group-item-warning').addClass('bg-warning text-dark');
|
|
} else {
|
|
$('#qcslider-collapse .list-group-item-primary').addClass('bg-primary text-white');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
$('#qcextra-confidence').on('input', function() {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
$('#qcextra-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)bg-\S+/g) || []).join(' ');
|
|
});
|
|
$('#qcextra-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)text-\S+/g) || []).join(' ');
|
|
});
|
|
|
|
if ( $(this).val() < 2.0 ) {
|
|
$('#qcextra-collapse .list-group-item-warning').addClass('bg-warning text-dark');
|
|
} else {
|
|
$('#qcextra-collapse .list-group-item-success').addClass('bg-success text-white');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
|
|
$('#qcextra-comments').bind('input propertychange', function() {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
});
|
|
|
|
$( '#btn-post' ).click( function() {
|
|
var payload = read_form();
|
|
var md5sum = "unspecified";
|
|
var params = {
|
|
'rating': payload['rating'],
|
|
'md5sum': md5sum,
|
|
'name': "",
|
|
'comment': JSON.stringify(payload['artifacts'])
|
|
};
|
|
|
|
// disable development releases
|
|
var authorization = $(this).val();
|
|
var ratingReq = new XMLHttpRequest();
|
|
ratingReq.open("POST", "https://mriqc.nimh.nih.gov:443/api/v1/rating");
|
|
ratingReq.setRequestHeader("Content-Type", "application/json;charset=UTF-8");
|
|
ratingReq.setRequestHeader("Authorization", authorization);
|
|
ratingReq.onload = function () {
|
|
status = ratingReq.status;
|
|
$('#btn-post').removeClass('btn-primary');
|
|
$('#btn-post').attr('disabled', true);
|
|
$('#btn-post').attr('aria-disabled', true);
|
|
$('#btn-post').prop('disabled');
|
|
$('#btn-post').addClass('disabled');
|
|
$('#btn-post').removeClass('active');
|
|
if (status === "201") {
|
|
$('#btn-post').addClass('btn-success');
|
|
$('#btn-post').html('Posted!');
|
|
} else {
|
|
$('#btn-post').addClass('btn-danger');
|
|
$('#btn-post').html('Failed');
|
|
};
|
|
};
|
|
ratingReq.send(JSON.stringify(params));
|
|
});
|
|
|
|
$( 'body' ).on( 'click', '#qcartifacts-group input', function(e) {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
$( 'body' ).on( 'click', '#qcrating-toggler', function(e) {
|
|
toggle_rating();
|
|
});
|
|
</script>
|
|
</div>
|
|
|
|
<script type="text/javascript">
|
|
function toggle(id) {
|
|
var element = document.getElementById(id);
|
|
if(element.style.display == 'block')
|
|
element.style.display = 'none';
|
|
else
|
|
element.style.display = 'block';
|
|
}
|
|
</script>
|
|
</body>
|
|
</html> |