openneuro-mriqc24.0.2/ds003521
Watch
2
0
Fork
You've already forked ds003521
 0
Code Activity
No description
88 commits 72 branches 0 tags 835 MiB
  • HTML 99.8%
  • Shell 0.2%
Find a file
Exact
Repository files (latest commit first)
Filename Latest commit message Latest commit date
Felix Hoffstaedter d02d97f4f6 [DATALAD RUNCMD] run MRIQC classifier 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--0.15.1.sing mriqc_clf --load-classifier -X group_T1w.tsv;   mv mclf_run*data-unseen_pred.csv mclf_data-unseen_pred.csv",
 "dsid": "e9ead75d-3c49-4b76-a4a9-5bfaf78150fa",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--0.15.1.sing"
 ],
 "inputs": [
  "group_T1w.tsv"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2026-06-03 16:17:08 +02:00
.datalad
code
duct-logs
sourcedata
sub-sid000216
sub-sid000217
sub-sid000375
sub-sid000475
sub-sid000476
sub-sid000494
sub-sid000496
sub-sid000498
sub-sid000529
sub-sid000570
sub-sid000573
sub-sid000667
sub-sid000668
sub-sid000669
sub-sid000671
sub-sid000677
sub-sid000678
sub-sid000679
sub-sid000680
sub-sid000681
sub-sid000682
sub-sid000683
sub-sid000688
sub-sid000692
sub-sid000694
sub-sid000695
sub-sid000697
sub-sid000698
sub-sid000699
sub-sid000704
sub-sid000705
sub-sid000706
sub-sid000707
sub-sid000708
sub-sid000710
.bidsignore
.gitattributes
.gitignore
.gitmodules
CHANGELOG.md
dataset_description.json
group_bold.html [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 16:16:49 +02:00
group_bold.tsv [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 16:16:49 +02:00
group_T1w.html [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 16:16:49 +02:00
group_T1w.tsv [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 16:16:49 +02:00
mclf_data-unseen_pred.csv [DATALAD RUNCMD] run MRIQC classifier 2026-06-03 16:17:08 +02:00
README.md
sub-sid000216_acq-MPRAGE_T1w.html
sub-sid000216_task-movie_run-01_bold.html
sub-sid000217_acq-MPRAGE_T1w.html
sub-sid000217_task-movie_run-01_bold.html
sub-sid000375_acq-MPRAGE_T1w.html
sub-sid000375_task-movie_run-01_bold.html
sub-sid000475_acq-MPRAGE_T1w.html
sub-sid000475_task-movie_run-01_bold.html
sub-sid000476_acq-MPRAGE_T1w.html
sub-sid000476_task-movie_run-01_bold.html
sub-sid000494_acq-MPRAGE_T1w.html
sub-sid000494_task-movie_run-01_bold.html
sub-sid000496_acq-MPRAGE_T1w.html
sub-sid000496_task-movie_run-01_bold.html
sub-sid000498_acq-MPRAGE_T1w.html
sub-sid000498_task-movie_run-01_bold.html
sub-sid000529_acq-MPRAGE_T1w.html
sub-sid000529_task-movie_run-01_bold.html
sub-sid000570_acq-MPRAGE_T1w.html
sub-sid000570_task-movie_run-01_bold.html
sub-sid000573_acq-MPRAGE_T1w.html
sub-sid000573_task-movie_run-01_bold.html
sub-sid000667_acq-MPRAGE_T1w.html
sub-sid000667_task-movie_run-01_bold.html
sub-sid000668_acq-MPRAGE_T1w.html
sub-sid000668_task-movie_run-01_bold.html
sub-sid000669_acq-MPRAGE_T1w.html
sub-sid000669_task-movie_run-01_bold.html
sub-sid000671_acq-MPRAGE_T1w.html
sub-sid000671_task-movie_run-01_bold.html
sub-sid000677_acq-MPRAGE_T1w.html
sub-sid000677_task-movie_run-01_bold.html
sub-sid000678_acq-MPRAGE_T1w.html
sub-sid000678_task-movie_run-01_bold.html
sub-sid000679_acq-MPRAGE_T1w.html
sub-sid000679_task-movie_run-01_bold.html
sub-sid000680_acq-MPRAGE_T1w.html
sub-sid000680_task-movie_run-01_bold.html
sub-sid000681_acq-MPRAGE_T1w.html
sub-sid000681_task-movie_run-01_bold.html
sub-sid000682_acq-MPRAGE_T1w.html
sub-sid000682_task-movie_run-01_bold.html
sub-sid000683_acq-MPRAGE_T1w.html
sub-sid000683_task-movie_run-01_bold.html
sub-sid000688_acq-MPRAGE_T1w.html
sub-sid000688_task-movie_run-01_bold.html
sub-sid000692_acq-MPRAGE_T1w.html
sub-sid000692_task-movie_run-01_bold.html
sub-sid000694_acq-MPRAGE_T1w.html
sub-sid000694_task-movie_run-01_bold.html
sub-sid000695_acq-MPRAGE_T1w.html
sub-sid000695_task-movie_run-01_bold.html
sub-sid000697_acq-MPRAGE_T1w.html
sub-sid000697_task-movie_run-01_bold.html
sub-sid000698_acq-MPRAGE_T1w.html
sub-sid000698_task-movie_run-01_bold.html
sub-sid000699_acq-MPRAGE_T1w.html
sub-sid000699_task-movie_run-01_bold.html
sub-sid000704_acq-MPRAGE_T1w.html
sub-sid000704_task-movie_run-01_bold.html
sub-sid000705_acq-MPRAGE_T1w.html
sub-sid000705_task-movie_run-01_bold.html
sub-sid000706_acq-MPRAGE_T1w.html
sub-sid000706_task-movie_run-01_bold.html
sub-sid000707_acq-MPRAGE_T1w.html
sub-sid000707_task-movie_run-01_bold.html
sub-sid000708_acq-MPRAGE_T1w.html
sub-sid000708_task-movie_run-01_bold.html
sub-sid000710_acq-MPRAGE_T1w.html
sub-sid000710_task-movie_run-01_bold.html

README.md

ds003521 - MRIQC derivatives

This dataset is a BIDS Derivatives dataset resulting from running MRIQC 24.0.2 on ds003521.

Methods

MRIQC documentation can be found on https://mriqc.readthedocs.io/.

This dataset was created using BOOTSTRAP - a high-throughput container workflow for MRIQC implementing the FAIRly Big Workflow using Datalad and Singularity containers for full reproducibility and provenance capture including resource consumption via con-duct.

Acknowledgements

The authors from the Institute of Neuroscience and Medicine (INM-7) at the Forschungszentrum Jülich, Germany gratefully acknowledge the FENIX Research Infrastructure for funding this project by providing cloud computing time on the FZJ Supercomputer JUSUF at Jülich Supercomputing Centre (JSC).