[ENH]: Allow template space request for compute_brain_mask #415

Merged
synchon merged 4 commits from enh/gm_template_space into main 2024-12-09 11:15:17 +00:00
synchon commented 2024-12-06 13:18:26 +00:00 (Migrated from github.com)
  • description of feature/fix
  • tests added/passed
  • add an entry for the latest changes

This PR allows template space to be requested for compute_brain_mask.

* [x] description of feature/fix * [x] tests added/passed * [x] add an entry for the latest changes This PR allows template space to be requested for `compute_brain_mask`.
fraimondo (Migrated from github.com) reviewed 2024-12-06 13:18:26 +00:00
github-actions[bot] commented 2024-12-06 14:15:26 +00:00 (Migrated from github.com)
PR Preview Action v1.4.8
🚀 Deployed preview to https://juaml.github.io/junifer/pr-preview/pr-415/
on branch gh-pages at 2024-12-09 12:08 UTC
[PR Preview Action](https://github.com/rossjrw/pr-preview-action) v1.4.8 :---: :rocket: Deployed preview to https://juaml.github.io/junifer/pr-preview/pr-415/ on branch [`gh-pages`](https://github.com/juaml/junifer/tree/gh-pages) at 2024-12-09 12:08 UTC <!-- Sticky Pull Request Commentpr-preview -->
codecov[bot] commented 2024-12-09 10:18:50 +00:00 (Migrated from github.com)

Codecov Report

Attention: Patch coverage is 0% with 21 lines in your changes missing coverage. Please review.

Project coverage is 0.01%. Comparing base (69275b2) to head (7f5090b).
Report is 5 commits behind head on main.

Files with missing lines Patch % Lines
junifer/data/masks/_masks.py 0.00% 14 Missing ⚠️
junifer/data/template_spaces.py 0.00% 7 Missing ⚠️
Additional details and impacted files

Impacted file tree graph

@@           Coverage Diff            @@
##            main    #415      +/-   ##
========================================
- Coverage   0.01%   0.01%   -0.01%     
========================================
  Files        133     133              
  Lines       5718    5736      +18     
========================================
  Hits           1       1              
- Misses      5717    5735      +18     
Flag Coverage Δ
docs 100.00% <ø> (ø)
junifer 0.00% <0.00%> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines Coverage Δ
junifer/data/template_spaces.py 0.00% <0.00%> (ø)
junifer/data/masks/_masks.py 0.00% <0.00%> (ø)
## [Codecov](https://app.codecov.io/gh/juaml/junifer/pull/415?dropdown=coverage&src=pr&el=h1&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) Report Attention: Patch coverage is `0%` with `21 lines` in your changes missing coverage. Please review. > Project coverage is 0.01%. Comparing base [(`69275b2`)](https://app.codecov.io/gh/juaml/junifer/commit/69275b2e6f7c463d7098709ded3100b953d4adc6?dropdown=coverage&el=desc&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) to head [(`7f5090b`)](https://app.codecov.io/gh/juaml/junifer/commit/7f5090b437819e855420c5069acd6e5e1d38f5f4?dropdown=coverage&el=desc&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml). > Report is 5 commits behind head on main. | [Files with missing lines](https://app.codecov.io/gh/juaml/junifer/pull/415?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | Patch % | Lines | |---|---|---| | [junifer/data/masks/\_masks.py](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&filepath=junifer%2Fdata%2Fmasks%2F_masks.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml#diff-anVuaWZlci9kYXRhL21hc2tzL19tYXNrcy5weQ==) | 0.00% | [14 Missing :warning: ](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | | [junifer/data/template\_spaces.py](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&filepath=junifer%2Fdata%2Ftemplate_spaces.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml#diff-anVuaWZlci9kYXRhL3RlbXBsYXRlX3NwYWNlcy5weQ==) | 0.00% | [7 Missing :warning: ](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | <details><summary>Additional details and impacted files</summary> [![Impacted file tree graph](https://app.codecov.io/gh/juaml/junifer/pull/415/graphs/tree.svg?width=650&height=150&src=pr&token=5H21JuZXMw&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml)](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) ```diff @@ Coverage Diff @@ ## main #415 +/- ## ======================================== - Coverage 0.01% 0.01% -0.01% ======================================== Files 133 133 Lines 5718 5736 +18 ======================================== Hits 1 1 - Misses 5717 5735 +18 ``` | [Flag](https://app.codecov.io/gh/juaml/junifer/pull/415/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | Coverage Δ | | |---|---|---| | [docs](https://app.codecov.io/gh/juaml/junifer/pull/415/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | `100.00% <ø> (ø)` | | | [junifer](https://app.codecov.io/gh/juaml/junifer/pull/415/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | `0.00% <0.00%> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml#carryforward-flags-in-the-pull-request-comment) to find out more. | [Files with missing lines](https://app.codecov.io/gh/juaml/junifer/pull/415?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | Coverage Δ | | |---|---|---| | [junifer/data/template\_spaces.py](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&filepath=junifer%2Fdata%2Ftemplate_spaces.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml#diff-anVuaWZlci9kYXRhL3RlbXBsYXRlX3NwYWNlcy5weQ==) | `0.00% <0.00%> (ø)` | | | [junifer/data/masks/\_masks.py](https://app.codecov.io/gh/juaml/junifer/pull/415?src=pr&el=tree&filepath=junifer%2Fdata%2Fmasks%2F_masks.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml#diff-anVuaWZlci9kYXRhL21hc2tzL19tYXNrcy5weQ==) | `0.00% <0.00%> (ø)` | | </details>
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