Improve external dependency handling of PipelineStepMixin #311

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synchon merged 22 commits from refactor/ext-dependency into main 2024-03-14 14:26:24 +00:00

Conversation 5 Commits 22 Files changed 29 +1696 -2524

2024-03-14

Synchon Mandal

chore: add changelogs 311.{change,enh}

8bf68ac01e

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2024-03-14 13:07:22 +01:00

Synchon Mandal

chore: improve docstrings for BOLDWarper

74cfd0a224

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2024-03-14 11:46:32 +01:00

Synchon Mandal

refactor: adapt BOLDWarper for conditional dependencies

fa776f3219

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2024-03-14 11:45:49 +01:00

Synchon Mandal

chore: remove unnecessary tests for _ApplyWarper and _AntsApplyTransformsWarper

3911f94621

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2024-03-14 11:43:50 +01:00

Synchon Mandal

chore: improve typing annotations for _EXT_DEPENDENCIES of _ApplyWarper and _AntsApplyTransformsWarper

2a6d107580

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2024-03-14 11:42:59 +01:00

Synchon Mandal

refactor: remove BasePreprocessor inheritance for _ApplyWarper and _AntsApplyTransformsWarper

e3fdd376b1

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2024-03-14 11:40:40 +01:00

Synchon Mandal

fix: correct usage of WorkDirManager in AFNIALFF and AFNIReHo

056095cc24

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2024-03-14 11:34:58 +01:00

Synchon Mandal

update: improve ALFFSpheres

435deb8205

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2024-03-14 10:50:55 +01:00

Synchon Mandal

update: improve ALFFParcels

a8e6bb7129

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2024-03-14 10:50:36 +01:00

Synchon Mandal

update: improve tests for ALFFParcels and ALFFSpheres

43d62027f2

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2024-03-14 10:49:54 +01:00

Synchon Mandal

refactor: remove ALFFEstimator and adapt ALFFBase for conditional dependencies

5b0daeb232

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2024-03-14 10:49:13 +01:00

Synchon Mandal

update: introduce AFNIALFF and JuniferALFF classes

35008d331d

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2024-03-14 10:48:32 +01:00

Synchon Mandal

update: improve ReHoSpheres

f3109c2a03

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2024-03-14 10:47:51 +01:00

Synchon Mandal

update: make ReHoParcels accept list of parcellation names

7a6d405108

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2024-03-14 10:47:06 +01:00

Synchon Mandal

update: improve ReHoParcels

44bfcabcdc

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2024-03-14 10:46:46 +01:00

Synchon Mandal

update: improve tests for ReHoParcels and ReHoSpheres

77a7b7d8b8

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2024-03-14 10:45:55 +01:00

Synchon Mandal

refactor: remove ReHoEstimator and adapt ReHoBase for conditional dependencies

84bfa79828

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2024-03-14 10:45:00 +01:00

Synchon Mandal

update: introduce AFNIReHo and JuniferReHo classes

3e4f035ccd

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2024-03-14 10:43:38 +01:00

Synchon Mandal

chore: improve docstrings for pipeline.utils

a3b5b9f2af

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2024-03-14 10:42:24 +01:00

Synchon Mandal

update: set default for optional in pipeline.utils.check_ext_dependencies() and improve checks

563b14884c

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2024-03-14 10:41:17 +01:00

Synchon Mandal

chore: improve coverage checks for PipelineStepMixin

dee48f75fa

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2024-03-14 10:40:27 +01:00

Synchon Mandal

refactor: improve PipelineStepMixin with conditional dependencies and improved validation

e44f3d4630

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2024-03-14 10:39:18 +01:00