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Code Issues 14 Pull requests 2 Packages Activity Actions

[ENH]: Allow for local queue using GNU parallel #306

Merged
synchon merged 18 commits from feature/local-queue into main 2024-03-28 09:26:23 +00:00
Conversation 21 Commits 18 Files changed 7 +469 -6

2024-03-26

Synchon Mandal
fix: correct run command for GnuParallelLocalAdapter
44f2e9c7fc
2024-03-26 16:16:42 +01:00
Synchon Mandal
chore: improve command printing to stdout in GnuParallelLocalAdapter
afc7969c27
2024-03-26 16:08:07 +01:00
Synchon Mandal
fix: add missing elements file creation for GnuParallelLocalAdapter
5e54e9c4f6
2024-03-26 16:07:44 +01:00
Synchon Mandal
update: use absolute paths for pre_run.sh and pre_collect.sh in GnuParallelLocalAdapter
640939bcd3
2024-03-26 16:06:59 +01:00
Synchon Mandal
chore: improve tests for GnuParallelLocalAdapter
ae312ce051
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: improve GnuParallelLocalAdapter to handle pre-run, pre-collect and other stuff
1f83849b5f
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: revert removed abstract methods for QueueContextAdapter
971a6c47d7
2024-03-26 15:49:26 +01:00
Synchon Mandal
chore: add changelog 306.enh
dcae8376f2
2024-03-26 15:49:26 +01:00
Synchon Mandal
chore: remove unnecessary parallel invocation for junifer collect in GnuParallelLocalAdapter
ac5481541c
2024-03-26 15:49:26 +01:00
Synchon Mandal
fix: correct tests in test_functions.py
5bf489e3b2
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: make parallel halt and kill jobs if single element of junifer run fails
78482716d7
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: add --bar for junifer run in GnuParallelLocalAdapter
56bdade89a
2024-03-26 15:49:26 +01:00
Synchon Mandal
chore: improve logging for GnuParallelLocalAdapter
1dbd3d8987
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: modify job directory creation and reset to be queue kind specific
4f74f61c2d
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: integrate GnuParallelLocalAdapter as a queue kind
db4da64bed
2024-03-26 15:49:26 +01:00
Synchon Mandal
feature: introduce GnuParallelLocalAdapter and unit tests
fd6e7a8f2d
2024-03-26 15:49:26 +01:00
Synchon Mandal
update: relax concrete class implementation constraints for QueueContextAdapter
ae218c284e
2024-03-26 15:49:26 +01:00