[ENH]: Preprocessing step to warp any image to any standard space #301

Merged

synchon merged 22 commits from feature/space-warper into main 2024-03-22 11:50:59 +00:00

Conversation 25 Commits 22 Files changed 9 +690

2024-03-22

Synchon Mandal

update: add tests for SpaceWarper errors

8a5bc77c64

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2024-03-22 11:28:32 +01:00

Synchon Mandal

update: improve error message when SpaceWarper shouldn't be used in the pipeline

555e856bcc

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2024-03-22 11:28:32 +01:00

Synchon Mandal

update: handle use of FSL without T1w as reference for SpaceWarper

2734615f33

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2024-03-22 11:28:32 +01:00

2024-03-21

Synchon Mandal

update: correct test parameters for SpaceWarper

cc3c35acc7

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: revert warping helpers to FSLWarper and ANTsWarper with improvements

7bf50b8cc5

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: improve conditionals for SpaceWarper

54493ed3f1

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: correct data key access for SpaceWarper test

7c740a2d54

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: fix tests for SpaceWarper

2d75f448b7

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: delete component tempdir after use in ANTsTemplateWarper

7ca1565eb3

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2024-03-21 15:35:51 +01:00

Synchon Mandal

fix: typo in SpaceWarper

5a76512ff1

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: update docstring for SpaceWarper

5194edc608

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: introduce ANTsTemplateWarper

4cec3cf3e7

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: rename FSLWarper and ANTsWarper to FSLNativeWarper and ANTsNativeWarper respectively

d7b8d05048

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: update 301.feature

1e62f125de

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: add more supported data types for SpaceWarper

c312864419

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2024-03-21 15:35:51 +01:00

Synchon Mandal

refactor: use using parameter for conditional preprocessor check in SpaceWarper

d276fef79a

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: add _DEPENDENCIES to SpaceWarper

55562a5cc7

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: improve dependencies for ANTsWarper an FSLWarper

7be9a4293e

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: add changelogs 301.{feature,removal}

875dbd9728

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2024-03-21 15:35:51 +01:00

Synchon Mandal

chore: add deprecation notice for BOLDWarper

8c23cf9cec

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2024-03-21 15:35:51 +01:00

Synchon Mandal

feature: introduce SpaceWarper and add tests

2d627a0b55

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2024-03-21 15:35:51 +01:00

Synchon Mandal

update: introduce FSLWarper and ANTsWarper classes

1f563f688c

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2024-03-21 15:35:51 +01:00