[ENH]: Consistency of logging #239

Merged
synchon merged 20 commits from update/logging-consistency into main 2026-06-15 09:02:42 +00:00
synchon commented 2025-11-21 10:50:56 +00:00 (Migrated from github.com)

Are you requiring a new dataset or marker?

  • I understand this is not a marker or dataset request

Which feature do you want to include?

Logging level "INFO" should log all parameters.

Currently, some steps log parameters and some other don't. When level is INFO, this should be general.

Example: in fMRIPrepConfoundRemover, filtering parameters are logged only in DEBUG level.

How do you imagine this integrated in junifer?

Go one by one thorugh the datagbrabbers/preprocessing/markers/storage and check mostly the "init".

Do you have a sample code that implements this outside of junifer?

No response

Anything else to say?

No response

### Are you requiring a new dataset or marker? - [X] I understand this is not a marker or dataset request ### Which feature do you want to include? Logging level "INFO" should log all parameters. Currently, some steps log parameters and some other don't. When level is INFO, this should be general. Example: in `fMRIPrepConfoundRemover`, filtering parameters are logged only in DEBUG level. ### How do you imagine this integrated in junifer? Go one by one thorugh the datagbrabbers/preprocessing/markers/storage and check mostly the "init". ### Do you have a sample code that implements this outside of junifer? _No response_ ### Anything else to say? _No response_
codecov[bot] commented 2025-11-21 10:51:49 +00:00 (Migrated from github.com)

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 100.00%. Comparing base (8851c3c) to head (36cac57).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

Impacted file tree graph

@@            Coverage Diff            @@
##              main      #239   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files            1         1           
  Lines            1         1           
=========================================
  Hits             1         1           
Flag Coverage Δ
docs 100.00% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.
## [Codecov](https://app.codecov.io/gh/juaml/junifer/pull/239?dropdown=coverage&src=pr&el=h1&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) Report :white_check_mark: All modified and coverable lines are covered by tests. :white_check_mark: Project coverage is 100.00%. Comparing base ([`8851c3c`](https://app.codecov.io/gh/juaml/junifer/commit/8851c3c154e97e6ad82d894a287a2be122015041?dropdown=coverage&el=desc&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml)) to head ([`36cac57`](https://app.codecov.io/gh/juaml/junifer/commit/36cac57d1a9536c133723acc6cfc1de8cab648d1?dropdown=coverage&el=desc&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml)). :warning: Report is 1 commits behind head on main. <details><summary>Additional details and impacted files</summary> [![Impacted file tree graph](https://app.codecov.io/gh/juaml/junifer/pull/239/graphs/tree.svg?width=650&height=150&src=pr&token=5H21JuZXMw&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml)](https://app.codecov.io/gh/juaml/junifer/pull/239?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) ```diff @@ Coverage Diff @@ ## main #239 +/- ## ========================================= Coverage 100.00% 100.00% ========================================= Files 1 1 Lines 1 1 ========================================= Hits 1 1 ``` | [Flag](https://app.codecov.io/gh/juaml/junifer/pull/239/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | Coverage Δ | | |---|---|---| | [docs](https://app.codecov.io/gh/juaml/junifer/pull/239/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml) | `100.00% <ø> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=juaml#carryforward-flags-in-the-pull-request-comment) to find out more. </details> <details><summary> :rocket: New features to boost your workflow: </summary> - :snowflake: [Test Analytics](https://docs.codecov.com/docs/test-analytics): Detect flaky tests, report on failures, and find test suite problems. </details>
fraimondo (Migrated from github.com) approved these changes 2026-06-03 14:24:12 +00:00
Sign in to join this conversation.
No reviewers
No milestone
No assignees
1 participant
Notifications
Due date
The due date is invalid or out of range. Please use the format "yyyy-mm-dd".

No due date set.

Dependencies

No dependencies set

Reference
juaml/junifer!239
No description provided.