Felix Hoffstaedter
b4bcf2976c
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0123 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "2d58dd48-4166-4dc3-9cd1-64f3d0665a8c",
"exit": 0,
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],
"inputs": [
"sourcedata/raw/sub-0123",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
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616 lines
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<div class="collapse navbar-collapse" id="navbarSupportedContent">
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<ul class="navbar-nav me-auto mb-2 mb-lg-0">
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<li class="nav-item"><a class="nav-link" href="#Basic echo-wise reports">Basic echo-wise reports</a></li>
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<li class="nav-item"><a class="nav-link" href="#Extended echo-wise reports">Extended echo-wise reports</a></li>
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<li class="nav-item"><a class="nav-link" href="#Extended reports shared across echos">Extended reports shared across echos</a></li>
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About
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<ul class="dropdown-menu">
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<li><a class="dropdown-item" href="#errors">Errors</a></li>
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<li><a class="dropdown-item" href="#meta-about-metadata">Reproducibility and provenance information</a></li>
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</li>
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<label class="form-check-label" style="width: 100pt;" for="qcrating-toggler">Rating widget</label>
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</div>
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</nav>
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<noscript>
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<h1 class="text-danger"> The navigation menu uses Javascript. Without it this report might not work as expected </h1>
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</noscript>
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<div id="Basic echo-wise reports" class="mt-5">
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<h1 class="sub-report-title pt-5 ps-4">Basic echo-wise reports</h1>
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<div id="acquisition-mb8_datatype-figures_desc-stdev_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">Standard deviation of signal through time</h3><p class="elem-caption">The voxel-wise standard deviation of the signal (variability along time).</p> <div class="reportlet">
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<img class="svg-reportlet" src="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-stdev_bold.svg" style="width: 100%" />
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-stdev_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-stdev_bold.svg</a></small>
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</div>
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<div id="acquisition-mb8_datatype-figures_desc-background_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">View of the background of the voxel-wise average of the BOLD timeseries</h3><p class="elem-caption">This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.</p> <div class="reportlet">
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<img class="svg-reportlet" src="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-background_bold.svg" style="width: 100%" />
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-background_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-background_bold.svg</a></small>
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</div>
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<div id="acquisition-mb8_datatype-figures_desc-zoomed_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">Voxel-wise average of BOLD time-series, zoomed-in covering just the brain</h3><p class="elem-caption">This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.</p> <div class="reportlet">
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<img class="svg-reportlet" src="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-zoomed_bold.svg" style="width: 100%" />
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-zoomed_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-zoomed_bold.svg</a></small>
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</div>
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<div id="acquisition-mb8_datatype-figures_desc-carpet_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">Carpetplot and nuisance signals</h3><p class="elem-caption">The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.</p> <div class="reportlet">
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<img class="svg-reportlet" src="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-carpet_bold.svg" style="width: 100%" />
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-carpet_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-carpet_bold.svg</a></small>
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</div>
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</div>
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<div id="Extended echo-wise reports" class="mt-5">
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<h1 class="sub-report-title pt-5 ps-4">Extended echo-wise reports</h1>
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<div id="acquisition-mb8_datatype-figures_desc-mean_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">Voxel-wise average of BOLD time-series</h3><p class="elem-caption">The average signal calculated across the last axis (time).</p> <div class="reportlet">
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<img class="svg-reportlet" src="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-mean_bold.svg" style="width: 100%" />
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-mean_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-mean_bold.svg</a></small>
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</div>
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</div>
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<div id="Extended reports shared across echos" class="mt-5">
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<h1 class="sub-report-title pt-5 ps-4">Extended reports shared across echos</h1>
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<div id="acquisition-mb8_datatype-figures_desc-brainmask_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">Brain extraction performance</h3><p class="elem-caption">Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.</p> <div class="reportlet">
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<img class="svg-reportlet" src="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-brainmask_bold.svg" style="width: 100%" />
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-brainmask_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-brainmask_bold.svg</a></small>
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</div>
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<div id="acquisition-mb8_datatype-figures_desc-norm_run-03_session-02_subject-0123_suffix-bold_task-narratives" class="ps-4 pe-4 mb-2">
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<h3 class="run-title mt-3">Spatial normalization of the anatomical image</h3><p class="elem-caption">This panel shows a <em>quick-and-dirty</em> nonlinear registration into the <code>MNI152NLin2009cAsym</code> template accessed with <a href="https://templateflow.org/browse" target="_blank"><em>TemplateFlow</em></a>.</p> <div class="reportlet">
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<object class="svg-reportlet" type="image/svg+xml" data="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-norm_bold.svg" style="">
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Problem loading figure sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.</object>
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</div>
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<small>Get figure file: <a href="./sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-norm_bold.svg" target="_blank">sub-0123/figures/sub-0123_ses-02_task-narratives_acq-mb8_run-03_desc-norm_bold.svg</a></small>
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</div>
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</div>
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<div id="About" class="mt-5">
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<h1 class="sub-report-title pt-5 ps-4">About</h1>
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<div id="errors" class="ps-4 pe-4 mb-2">
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<h2 class="sub-report-group mt-4">Errors</h2> <p class="alert alert-success" role="alert">No errors to report!</p>
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</div>
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<div id="meta-about-metadata" class="ps-4 pe-4 mb-2">
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<h2 class="sub-report-group mt-4">Reproducibility and provenance information</h2><p class="elem-caption">Thanks for using <em>MRIQC</em>. The following information may assist in
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reconstructing the provenance of the corresponding derivatives.
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</p> <div class="accordion accordion-flush" id="about-metadata">
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<div class="accordion-item">
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<h2 class="accordion-header" id="about-metadata-0">
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<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-0-collapse" aria-controls="about-metadata-0-collapse">
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Provenance Information
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</button>
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</h2>
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<div id="about-metadata-0-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-0-heading" data-bs-parent="#about-metadata-0">
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<div class="accordion-body metadata-table">
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<table id="about-metadata-table-0" class="table table-sm table-striped">
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<tr><td colspan=2>Execution environment</td><td>singularity</td></tr>
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<tr><td colspan=2>Input filename</td><td><BIDS root>/sub-0123/ses-02/func/sub-0123_ses-02_task-narratives_acq-mb8_run-03_bold.nii.gz</td></tr>
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<tr><td>Versions</td><td>MRIQC</td><td>24.1.0.dev0+gd5b13cb5.d20240826</td></tr>
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<tr><td>Versions</td><td>NiPype</td><td>1.8.6</td></tr>
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<tr><td>Versions</td><td>TemplateFlow</td><td>24.2.0</td></tr>
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<tr><td colspan=2>md5sum</td><td>87261b0e0170eac1c64fada9326b1c81</td></tr>
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</table>
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</div>
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</div>
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</div>
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<div class="accordion-item">
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<h2 class="accordion-header" id="about-metadata-1">
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<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-1-collapse" aria-controls="about-metadata-1-collapse">
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Dataset Information
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</button>
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</h2>
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<div id="about-metadata-1-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-1-heading" data-bs-parent="#about-metadata-1">
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<div class="accordion-body metadata-table">
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<table id="about-metadata-table-1" class="table table-sm table-striped">
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<tr><td colspan=2>AcquisitionMatrixPE</td><td>82</td></tr>
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<tr><td colspan=2>AcquisitionNumber</td><td>1</td></tr>
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<tr><td colspan=2>AcquisitionTime</td><td>21:38:47.570000</td></tr>
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<tr><td colspan=2>BandwidthPerPixelPhaseEncode</td><td>24.888</td></tr>
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<tr><td colspan=2>BaseResolution</td><td>82</td></tr>
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<tr><td colspan=2>BodyPartExamined</td><td>BRAIN</td></tr>
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<tr><td colspan=2>ConsistencyInfo</td><td>N4_VE11E_LATEST_20181129</td></tr>
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<tr><td colspan=2>ConversionSoftware</td><td>dcm2niix</td></tr>
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<tr><td colspan=2>ConversionSoftwareVersion</td><td>v1.0.20201102</td></tr>
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<tr><td colspan=2>DerivedVendorReportedEchoSpacing</td><td>0.00049</td></tr>
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<tr><td colspan=2>DeviceSerialNumber</td><td>66112</td></tr>
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<tr><td colspan=2>DwellTime</td><td>2e-06</td></tr>
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<tr><td colspan=2>EchoTime</td><td>0.0272</td></tr>
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<tr><td colspan=2>EchoTrainLength</td><td>82</td></tr>
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<tr><td colspan=2>EffectiveEchoSpacing</td><td>0.00049</td></tr>
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<tr><td colspan=2>FlipAngle</td><td>44</td></tr>
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<tr><td colspan=2>ImageComments</td><td>Unaliased MB8/PE3</td></tr>
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<tr><td colspan=2>ImageOrientationPatientDICOM</td><td>[0.999714, -0.0201665, 0.0128163, 0.0211156, 0.996664, -0.0788331]</td></tr>
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<tr><td colspan=2>ImageType</td><td>['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']</td></tr>
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<tr><td colspan=2>ImagingFrequency</td><td>123.259</td></tr>
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<tr><td colspan=2>InPlanePhaseEncodingDirectionDICOM</td><td>COL</td></tr>
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<tr><td colspan=2>InstitutionAddress</td><td>Maynard 3,Hanover,NH,US,03755</td></tr>
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<tr><td colspan=2>InstitutionName</td><td>Dartmouth College - PBS</td></tr>
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<tr><td colspan=2>InstitutionalDepartmentName</td><td>Department</td></tr>
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<tr><td colspan=2>MRAcquisitionType</td><td>2D</td></tr>
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<tr><td colspan=2>MagneticFieldStrength</td><td>3</td></tr>
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<tr><td colspan=2>Manufacturer</td><td>Siemens</td></tr>
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<tr><td colspan=2>ManufacturersModelName</td><td>Prisma</td></tr>
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<tr><td colspan=2>Modality</td><td>MR</td></tr>
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<tr><td colspan=2>MultibandAccelerationFactor</td><td>8</td></tr>
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<tr><td colspan=2>PartialFourier</td><td>1</td></tr>
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<tr><td colspan=2>PatientPosition</td><td>HFS</td></tr>
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<tr><td colspan=2>PercentPhaseFOV</td><td>100</td></tr>
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<tr><td colspan=2>PercentSampling</td><td>100</td></tr>
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<tr><td colspan=2>PhaseEncodingDirection</td><td>j-</td></tr>
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<tr><td colspan=2>PhaseEncodingSteps</td><td>82</td></tr>
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<tr><td colspan=2>PhaseResolution</td><td>1</td></tr>
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<tr><td colspan=2>PixelBandwidth</td><td>3050</td></tr>
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<tr><td colspan=2>ProcedureStepDescription</td><td>Wager_Wager^1076_spacetop</td></tr>
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<tr><td colspan=2>ProtocolName</td><td>func_run-03_task-narratives_acq-ap-mb8</td></tr>
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<tr><td colspan=2>PulseSequenceDetails</td><td>%CustomerSeq%\cmrr_mbep2d_bold</td></tr>
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<tr><td colspan=2>ReceiveCoilActiveElements</td><td>HEA;HEP</td></tr>
|
|
<tr><td colspan=2>ReceiveCoilName</td><td>Head_32</td></tr>
|
|
<tr><td colspan=2>ReconMatrixPE</td><td>82</td></tr>
|
|
<tr><td colspan=2>RepetitionTime</td><td>0.46</td></tr>
|
|
<tr><td colspan=2>SAR</td><td>0.0938842</td></tr>
|
|
<tr><td colspan=2>ScanOptions</td><td>FS</td></tr>
|
|
<tr><td colspan=2>ScanningSequence</td><td>EP</td></tr>
|
|
<tr><td colspan=2>SequenceName</td><td>epfid2d1_82</td></tr>
|
|
<tr><td colspan=2>SequenceVariant</td><td>SK\SS</td></tr>
|
|
<tr><td colspan=2>SeriesDescription</td><td>func_run-03_task-narratives_acq-ap-mb8</td></tr>
|
|
<tr><td colspan=2>SeriesNumber</td><td>12</td></tr>
|
|
<tr><td colspan=2>ShimSetting</td><td>[4242, -7752, -7284, 221, -120, 70, -49, 111]</td></tr>
|
|
<tr><td colspan=2>SliceThickness</td><td>2.7</td></tr>
|
|
<tr><td colspan=2>SliceTiming</td><td>[0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875]</td></tr>
|
|
<tr><td colspan=2>SoftwareVersions</td><td>syngo MR E11</td></tr>
|
|
<tr><td colspan=2>SpacingBetweenSlices</td><td>2.7</td></tr>
|
|
<tr><td colspan=2>StationName</td><td>AWP66112</td></tr>
|
|
<tr><td colspan=2>TaskName</td><td>narratives</td></tr>
|
|
<tr><td colspan=2>TotalReadoutTime</td><td>0.03969</td></tr>
|
|
<tr><td colspan=2>TxRefAmp</td><td>227.42</td></tr>
|
|
<tr><td colspan=2>WipMemBlock</td><td>af59c97f-a7d9-42c3-89dc-fef6060e3b50||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja</td></tr>
|
|
<tr><td>dcmmeta</td><td>affine</td><td>[[-2.6821608543395996, 0.05665149912238121, 0.030196068808436394, 106.3797607421875], [0.05410512536764145, 2.6739771366119385, -0.2135193943977356, -89.70507049560547], [0.03438510745763779, 0.2115035504102707, 2.6913747787475586, -77.9762954711914], [0.0, 0.0, 0.0, 1.0]]</td></tr>
|
|
<tr><td>dcmmeta</td><td>reorient_transform</td><td>[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]</td></tr>
|
|
<tr><td>dcmmeta</td><td>shape</td><td>[82, 82, 56, 1298]</td></tr>
|
|
<tr><td>dcmmeta</td><td>slice_dim</td><td>2</td></tr>
|
|
<tr><td>dcmmeta</td><td>version</td><td>0.6</td></tr>
|
|
<tr><td colspan=2>time</td><td>{'samples': {'AcquisitionNumber': [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351, 352, 353, 354, 355, 356, 357, 358, 359, 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 373, 374, 375, 376, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 398, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 417, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 435, 436, 437, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511, 512, 513, 514, 515, 516, 517, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531, 532, 533, 534, 535, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551, 552, 553, 554, 555, 556, 557, 558, 559, 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591, 592, 593, 594, 595, 596, 597, 598, 599, 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611, 612, 613, 614, 615, 616, 617, 618, 619, 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671, 672, 673, 674, 675, 676, 677, 678, 679, 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731, 732, 733, 734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 753, 754, 755, 756, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771, 772, 773, 774, 775, 776, 777, 778, 779, 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791, 792, 793, 794, 795, 796, 797, 798, 799, 800, 801, 802, 803, 804, 805, 806, 807, 808, 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'213853.550000', '213854.010000', '213854.470000', '213854.930000', '213855.390000', '213855.850000', '213856.310000', '213856.770000', '213857.230000', '213857.690000', '213858.150000', '213858.610000', '213859.070000', '213859.530000', '213859.990000', '213900.450000', '213900.910000', '213901.370000', '213901.830000', '213902.290000', '213902.750000', '213903.210000', '213903.670000', '213904.130000', '213904.590000', '213905.050000', '213905.510000', '213905.970000', '213906.430000', '213906.890000', '213907.350000', '213907.810000', '213908.270000', '213908.730000', '213909.190000', '213909.650000', '213910.110000', '213910.570000', '213911.030000', '213911.490000', '213911.950000', '213912.410000', '213912.870000', '213913.330000', '213913.790000', '213914.250000', '213914.710000', '213915.170000', '213915.630000', '213916.090000', '213916.550000', '213917.010000', '213917.470000', '213917.930000', '213918.390000', '213918.850000', '213919.310000', '213919.770000', '213920.230000', '213920.690000', '213921.150000', '213921.610000', '213922.070000', '213922.530000', '213922.990000', '213923.450000', '213923.910000', '213924.370000', '213924.830000', '213925.290000', '213925.750000', '213926.210000', '213926.670000', '213927.130000', '213927.590000', '213928.050000', '213928.510000', '213928.970000', '213929.430000', '213929.890000', '213930.350000', '213930.810000', '213931.270000', '213931.730000', '213932.190000', '213932.650000', '213933.110000', '213933.570000', '213934.030000', '213934.490000', '213934.950000', '213935.410000', '213935.870000', '213936.330000', '213936.790000', '213937.250000', '213937.710000', '213938.170000', '213938.630000', '213939.090000', '213939.550000', '213940.010000', '213940.470000', '213940.930000', '213941.390000', '213941.850000', '213942.310000', '213942.770000', '213943.230000', '213943.690000', '213944.150000', '213944.610000', '213945.070000', '213945.530000', '213945.990000', '213946.450000', '213946.910000', '213947.370000', '213947.830000', '213948.290000', '213948.750000', '213949.210000', '213949.670000', '213950.130000', '213950.590000', '213951.050000', '213951.510000', '213951.970000', '213952.430000', '213952.890000', '213953.350000', '213953.810000', '213954.270000', '213954.730000', '213955.190000', '213955.650000', '213956.110000', '213956.570000', '213957.030000', '213957.490000', '213957.950000', '213958.410000', '213958.870000', '213959.330000', '213959.790000', '214000.250000', '214000.710000', '214001.170000', '214001.630000', '214002.090000', '214002.550000', '214003.010000', '214003.470000', '214003.930000', '214004.390000', '214004.850000', '214005.310000', '214005.770000', '214006.230000', '214006.690000', '214007.150000', '214007.610000', '214008.070000', '214008.530000', '214008.990000', '214009.450000', '214009.910000', '214010.370000', '214010.830000', '214011.290000', '214011.750000', '214012.210000', '214012.670000', '214013.130000', '214013.590000', '214014.050000', '214014.510000', '214014.970000', '214015.430000', '214015.890000', '214016.350000', '214016.810000', '214017.270000', '214017.730000', '214018.190000', '214018.650000', '214019.110000', '214019.570000', '214020.030000', '214020.490000', '214020.950000', '214021.410000', '214021.870000', '214022.330000', '214022.790000', '214023.250000', '214023.710000', '214024.170000', '214024.630000', '214025.090000', '214025.550000', '214026.010000', '214026.470000', '214026.930000', '214027.390000', '214027.850000', '214028.310000', '214028.770000', '214029.230000', '214029.690000', '214030.150000', '214030.610000', '214031.070000', '214031.530000', '214031.990000', '214032.450000', '214032.910000', '214033.370000', '214033.830000', '214034.290000', '214034.750000', '214035.210000', '214035.670000', '214036.130000', '214036.590000', '214037.050000', '214037.510000', '214037.970000', '214038.430000', '214038.890000', '214039.350000', '214039.810000', '214040.270000', '214040.730000', '214041.190000', '214041.650000', '214042.110000', '214042.570000', '214043.030000', '214043.490000', '214043.950000', '214044.410000', '214044.870000', '214045.330000', '214045.790000', '214046.250000', '214046.710000', '214047.170000', '214047.630000', '214048.090000', '214048.550000', '214049.010000', '214049.470000', '214049.930000', '214050.390000', '214050.850000', '214051.310000', '214051.770000', '214052.230000', '214052.690000', '214053.150000', '214053.610000', '214054.070000', '214054.530000', '214054.990000', '214055.450000', '214055.910000', '214056.370000', '214056.830000', '214057.290000', '214057.750000', '214058.210000', '214058.670000', '214059.130000', '214059.590000', '214100.050000', '214100.510000', '214100.970000', '214101.430000', '214101.890000', '214102.350000', '214102.810000', '214103.270000', '214103.730000', '214104.190000', '214104.650000', '214105.110000', '214105.570000', '214106.030000', '214106.490000', 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9505.0, 9567.0, 9475.0, 9566.0, 9490.0, 9567.0, 9514.0, 9549.0, 9472.0, 9551.0, 9477.0, 9536.0, 9516.0, 9535.0, 9462.0, 9535.0, 9475.0, 9536.0, 9515.0, 9534.0, 9474.0, 9522.0, 9464.0, 9525.0, 9493.0, 9540.0, 9467.0, 9541.0, 9480.0, 9528.0, 9484.0, 9544.0, 9495.0, 9557.0, 9482.0, 9542.0, 9499.0, 9546.0, 9508.0, 9556.0, 9484.0, 9545.0, 9485.0, 9560.0, 9525.0, 9558.0, 9509.0, 9555.0, 9479.0, 9539.0, 9509.0, 9542.0, 9519.0, 9550.0, 9477.0, 9535.0, 9472.0, 9538.0, 9473.0, 9538.0, 9443.0, 9509.0, 9457.0, 9484.0, 9457.0, 9488.0, 9507.0, 9487.0, 9508.0, 9476.0, 9565.0, 9480.0, 9581.0, 9503.0, 9566.0, 9480.0, 9568.0, 9477.0, 9542.0, 9520.0, 9551.0, 9479.0, 9553.0, 9482.0, 9573.0, 9507.0, 9543.0, 9496.0, 9533.0, 9501.0, 9503.0, 9496.0, 9487.0, 9526.0, 9503.0, 9516.0, 9505.0, 9505.0, 9543.0, 9493.0, 9577.0, 9526.0, 9579.0, 9524.0, 9574.0, 9506.0, 9555.0, 9533.0, 9552.0, 9500.0, 9552.0, 9474.0, 9522.0, 9477.0, 9537.0, 9502.0, 9541.0, 9466.0, 9535.0, 9479.0, 9528.0, 9491.0, 9535.0, 9447.0, 9527.0, 9460.0, 9498.0, 9452.0, 9498.0, 9454.0, 9465.0, 9453.0, 9475.0, 9538.0, 9473.0, 9547.0, 9472.0, 9564.0, 9477.0, 9541.0, 9467.0, 9526.0, 9475.0, 9537.0, 9465.0, 9527.0, 9479.0, 9529.0, 9490.0, 9540.0, 9482.0, 9527.0, 9498.0, 9533.0, 9479.0, 9545.0, 9480.0, 9519.0, 9467.0, 9508.0, 9476.0, 9521.0, 9462.0, 9489.0, 9458.0, 9479.0, 9555.0, 9492.0, 9570.0, 9482.0, 9538.0, 9481.0, 9586.0, 9482.0, 9574.0, 9506.0, 9556.0, 9478.0, 9539.0, 9482.0, 9544.0, 9521.0, 9537.0, 9481.0, 9529.0, 9482.0, 9535.0, 9484.0, 9546.0, 9464.0, 9535.0, 9464.0, 9508.0, 9456.0, 9505.0, 9461.0, 9504.0, 9478.0, 9491.0, 9467.0, 9507.0, 9482.0, 9522.0, 9483.0, 9509.0, 9468.0, 9509.0, 9481.0, 9533.0, 9477.0, 9504.0, 9475.0, 9493.0, 9557.0, 9492.0, 9566.0, 9490.0, 9565.0, 9472.0, 9570.0, 9478.0, 9555.0, 9517.0, 9567.0, 9480.0, 9536.0, 9476.0, 9540.0, 9517.0, 9552.0, 9479.0, 9554.0, 9496.0, 9556.0, 9503.0, 9550.0, 9473.0, 9537.0, 9463.0, 9524.0, 9463.0, 9525.0, 9475.0, 9537.0, 9461.0, 9510.0, 9465.0, 9517.0, 9464.0, 9514.0, 9444.0, 9500.0, 9459.0, 9474.0, 9497.0, 9470.0, 9546.0, 9486.0, 9491.0, 9472.0, 9537.0, 9472.0, 9583.0, 9472.0, 9534.0, 9470.0, 9538.0, 9458.0, 9522.0, 9475.0, 9522.0, 9487.0, 9521.0, 9473.0, 9511.0, 9462.0, 9499.0, 9462.0, 9512.0, 9460.0, 9497.0, 9462.0, 9486.0, 9460.0, 9478.0, 9540.0, 9473.0, 9473.0, 9479.0, 9536.0, 9494.0, 9584.0, 9474.0, 9569.0, 9490.0, 9553.0, 9461.0, 9540.0, 9476.0, 9524.0, 9489.0, 9529.0, 9462.0, 9498.0, 9462.0, 9504.0, 9459.0, 9488.0, 9477.0, 9487.0, 9480.0, 9477.0, 9479.0, 9495.0, 9482.0, 9495.0, 9479.0, 9497.0, 9480.0, 9495.0, 9465.0, 9509.0, 9477.0, 9498.0, 9478.0, 9500.0, 9468.0, 9507.0, 9497.0, 9514.0, 9469.0, 9513.0, 9472.0, 9535.0, 9469.0, 9539.0, 9468.0, 9564.0, 9467.0, 9560.0, 9468.0, 9549.0, 9477.0, 9538.0, 9592.0, 9540.0, 9467.0, 9459.0, 9426.0, 9453.0, 9514.0, 9547.0, 9446.0, 9464.0, 9478.0, 9491.0, 9517.0, 9529.0, 9506.0, 9530.0, 9509.0, 9611.0, 9507.0, 9581.0, 9538.0, 9574.0, 9503.0, 9559.0, 9489.0, 9528.0, 9515.0, 9494.0, 9476.0, 9454.0, 9519.0, 9468.0, 9560.0, 9457.0, 9505.0, 9458.0, 9483.0, 9476.0, 9472.0, 9480.0, 9476.0, 9478.0, 9479.0, 9494.0, 9478.0, 9493.0, 9470.0, 9538.0, 9490.0, 9484.0, 9515.0, 9476.0, 9547.0, 9485.0, 9579.0, 9509.0, 9557.0, 9475.0, 9540.0, 9470.0, 9527.0, 9470.0, 9522.0, 9436.0, 9478.0, 9439.0, 9468.0, 9435.0, 9452.0, 9439.0, 9471.0, 9457.0, 9472.0, 9472.0, 9478.0, 9525.0, 9458.0, 9458.0, 9478.0, 9474.0, 9481.0, 9555.0, 9479.0, 9540.0, 9500.0, 9460.0, 9488.0, 9467.0, 9505.0, 9474.0, 9523.0, 9482.0, 9510.0, 9482.0, 9507.0, 9464.0, 9507.0, 9463.0, 9490.0, 9462.0, 9489.0, 9513.0, 9531.0, 9512.0, 9513.0, 9496.0, 9485.0, 9523.0, 9500.0, 9532.0, 9510.0, 9461.0, 9474.0, 9449.0, 9480.0, 9462.0, 9491.0, 9438.0, 9477.0, 9442.0, 9481.0, 9445.0, 9523.0, 9465.0, 9535.0, 9478.0, 9542.0, 9494.0, 9568.0, 9510.0, 9542.0, 9478.0, 9512.0, 9476.0, 9524.0, 9472.0, 9538.0, 9498.0, 9440.0, 9482.0, 9438.0, 9469.0, 9468.0, 9498.0, 9438.0, 9509.0, 9437.0, 9466.0, 9457.0, 9471.0, 9479.0, 9479.0, 9437.0, 9465.0, 9435.0, 9454.0, 9454.0, 9473.0, 9480.0, 9469.0, 9449.0, 9471.0, 9468.0, 9489.0, 9515.0, 9472.0, 9455.0, 9473.0, 9579.0, 9554.0, 9471.0, 9463.0, 9449.0, 9469.0, 9489.0, 9513.0, 9532.0, 9512.0, 9550.0, 9517.0, 9570.0, 9515.0, 9567.0, 9513.0, 9567.0, 9587.0, 9563.0, 9565.0, 9514.0, 9596.0, 9541.0, 9593.0, 9536.0, 9555.0, 9491.0, 9553.0, 9478.0, 9587.0, 9507.0, 9570.0, 9502.0, 9512.0, 9490.0, 9473.0, 9477.0, 9525.0, 9476.0, 9566.0, 9499.0, 9493.0, 9468.0, 9507.0, 9468.0, 9533.0, 9464.0, 9515.0, 9468.0, 9432.0, 9463.0, 9472.0, 9450.0, 9530.0, 9464.0, 9484.0, 9451.0, 9499.0, 9466.0, 9525.0, 9451.0, 9530.0, 9451.0, 9471.0, 9454.0, 9493.0, 9471.0, 9564.0, 9469.0, 9547.0, 9455.0, 9519.0, 9474.0, 9522.0, 9481.0, 9551.0, 9477.0, 9522.0, 9476.0, 9496.0, 9479.0, 9503.0, 9494.0, 9474.0, 9492.0, 9464.0, 9498.0, 9471.0, 9518.0, 9466.0, 9560.0, 9464.0, 9558.0, 9486.0, 9560.0, 9511.0, 9570.0, 9497.0, 9567.0, 9483.0, 9558.0, 9509.0, 9567.0, 9509.0, 9566.0, 9481.0, 9572.0, 9508.0, 9572.0, 9523.0, 9568.0, 9478.0, 9568.0, 9477.0, 9536.0, 9500.0, 9548.0, 9476.0, 9538.0, 9491.0, 9557.0, 9485.0, 9554.0, 9508.0, 9526.0, 9479.0, 9529.0, 9483.0, 9557.0, 9495.0, 9496.0, 9490.0, 9500.0, 9492.0, 9529.0, 9494.0, 9517.0, 9494.0, 9479.0, 9498.0, 9559.0, 9494.0, 9516.0, 9499.0, 9502.0, 9494.0, 9491.0, 9490.0, 9478.0, 9491.0, 9460.0, 9495.0, 9478.0, 9494.0, 9469.0, 9508.0, 9472.0, 9523.0, 9488.0, 9510.0, 9489.0, 9550.0, 9492.0, 9577.0, 9494.0, 9581.0, 9507.0, 9555.0, 9528.0, 9485.0, 9526.0, 9497.0, 9530.0, 9520.0, 9506.0, 9573.0, 9511.0, 9599.0, 9518.0, 9586.0, 9534.0, 9591.0, 9553.0, 9502.0, 9534.0, 9490.0, 9520.0, 9511.0, 9527.0, 9439.0, 9494.0, 9441.0, 9469.0, 9454.0, 9470.0, 9456.0, 9511.0, 9458.0, 9485.0, 9466.0, 9501.0, 9485.0, 9517.0, 9488.0, 9549.0, 9489.0, 9567.0, 9516.0, 9560.0, 9513.0, 9572.0, 9482.0, 9560.0, 9509.0, 9540.0, 9487.0, 9537.0, 9457.0, 9524.0, 9443.0, 9496.0, 9442.0, 9508.0, 9459.0, 9481.0, 9456.0, 9471.0, 9476.0, 9474.0, 9455.0, 9473.0, 9457.0, 9476.0, 9501.0, 9480.0, 9544.0, 9477.0, 9505.0, 9500.0, 9512.0, 9515.0, 9500.0, 9480.0, 9496.0, 9520.0, 9479.0, 9493.0, 9492.0, 9481.0, 9462.0, 9497.0, 9478.0, 9499.0, 9539.0, 9499.0, 9560.0, 9508.0, 9538.0, 9476.0, 9567.0, 9478.0, 9571.0, 9500.0, 9509.0, 9478.0, 9474.0, 9476.0, 9532.0, 9493.0, 9554.0, 9494.0, 9568.0, 9479.0, 9587.0, 9478.0, 9555.0, 9528.0, 9550.0, 9475.0, 9537.0, 9464.0, 9532.0, 9481.0, 9540.0, 9499.0, 9561.0, 9488.0, 9560.0, 9501.0, 9559.0, 9509.0, 9557.0, 9482.0, 9543.0, 9450.0, 9516.0, 9466.0, 9517.0, 9459.0, 9501.0, 9462.0, 9491.0, 9465.0, 9493.0, 9482.0, 9490.0, 9466.0, 9495.0, 9478.0, 9482.0, 9484.0, 9492.0, 9480.0, 9537.0, 9467.0, 9510.0, 9478.0, 9508.0, 9491.0, 9534.0, 9462.0, 9500.0, 9458.0, 9488.0, 9475.0, 9500.0, 9474.0, 9530.0, 9457.0, 9502.0, 9464.0, 9491.0, 9468.0, 9530.0, 9450.0, 9544.0, 9463.0, 9515.0, 9463.0, 9521.0, 9468.0, 9544.0, 9461.0, 9514.0, 9457.0, 9485.0, 9443.0, 9487.0, 9458.0, 9514.0, 9461.0, 9487.0, 9461.0, 9501.0, 9451.0, 9539.0, 9446.0, 9527.0, 9465.0, 9518.0, 9464.0, 9540.0, 9469.0, 9542.0, 9468.0, 9546.0, 9488.0, 9542.0, 9496.0, 9559.0, 9484.0, 9560.0, 9485.0, 9563.0, 9515.0, 9559.0, 9500.0, 9548.0, 9500.0, 9560.0, 9481.0, 9542.0, 9499.0, 9529.0, 9500.0, 9548.0, 9500.0, 9519.0, 9499.0, 9463.0, 9487.0, 9603.0, 9576.0, 9492.0, 9480.0, 9462.0, 9470.0, 9491.0, 9501.0, 9513.0, 9497.0, 9547.0, 9518.0, 9582.0, 9533.0, 9598.0, 9548.0, 9612.0, 9546.0, 9606.0, 9527.0, 9586.0, 9536.0, 9586.0, 9512.0, 9564.0, 9479.0, 9550.0, 9477.0, 9545.0, 9465.0, 9542.0, 9460.0, 9528.0, 9446.0, 9500.0, 9442.0, 9513.0, 9445.0, 9485.0, 9458.0, 9471.0, 9454.0, 9475.0, 9511.0, 9483.0, 9443.0, 9474.0, 9523.0, 9472.0, 9552.0, 9474.0, 9548.0, 9475.0, 9562.0, 9461.0, 9537.0, 9476.0, 9532.0, 9459.0, 9526.0, 9464.0, 9529.0, 9467.0, 9547.0, 9481.0, 9557.0, 9482.0, 9546.0, 9486.0, 9557.0, 9483.0, 9558.0]}, 'slices': {}}</td></tr>
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</table>
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</div>
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</div>
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</div>
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<div class="accordion-item">
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<h2 class="accordion-header" id="about-metadata-2">
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<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#about-metadata-2-collapse" aria-controls="about-metadata-2-collapse">
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Extracted Image quality metrics (IQMs)
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</button>
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</h2>
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<div id="about-metadata-2-collapse" class="accordion-collapse collapse" aria-labelledby="about-metadata-2-heading" data-bs-parent="#about-metadata-2">
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<div class="accordion-body metadata-table">
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<table id="about-metadata-table-2" class="table table-sm table-striped">
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<tr><td colspan=3>aor</td><td>0.00036646831530139106</td></tr>
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<tr><td colspan=3>aqi</td><td>0.018717424265842348</td></tr>
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<tr><td colspan=3>dummy_trs</td><td>4</td></tr>
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<tr><td>dvars</td><td colspan=2>nstd</td><td>37.67786096207274</td></tr>
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<tr><td>dvars</td><td colspan=2>std</td><td>1.209772762730085</td></tr>
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<tr><td>dvars</td><td colspan=2>vstd</td><td>0.9922924539288458</td></tr>
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<tr><td colspan=3>efc</td><td>0.4519</td></tr>
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<tr><td colspan=3>fber</td><td>8163.4756</td></tr>
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<tr><td>fd</td><td colspan=2>mean</td><td>0.06989618336859132</td></tr>
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<tr><td>fd</td><td colspan=2>num</td><td>5</td></tr>
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<tr><td>fd</td><td colspan=2>perc</td><td>0.38639876352395675</td></tr>
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<tr><td>fwhm</td><td colspan=2>avg</td><td>2.4973082191706406</td></tr>
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<tr><td>fwhm</td><td colspan=2>x</td><td>2.398891306442338</td></tr>
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<tr><td>fwhm</td><td colspan=2>y</td><td>2.733548207554405</td></tr>
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<tr><td>fwhm</td><td colspan=2>z</td><td>2.3594851435151782</td></tr>
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<tr><td colspan=3>gcor</td><td>0.00916659</td></tr>
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<tr><td>gsr</td><td colspan=2>x</td><td>-0.019844762980937958</td></tr>
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<tr><td>gsr</td><td colspan=2>y</td><td>0.03157675638794899</td></tr>
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<tr><td>size</td><td colspan=2>t</td><td>1294</td></tr>
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<tr><td>size</td><td colspan=2>x</td><td>82</td></tr>
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<tr><td>size</td><td colspan=2>y</td><td>82</td></tr>
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<tr><td>size</td><td colspan=2>z</td><td>56</td></tr>
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<tr><td colspan=3>snr</td><td>3.827185104235911</td></tr>
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<tr><td>spacing</td><td colspan=2>tr</td><td>0.46000000834465027</td></tr>
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<tr><td>spacing</td><td colspan=2>x</td><td>2.682926893234253</td></tr>
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<tr><td>spacing</td><td colspan=2>y</td><td>2.682926893234253</td></tr>
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<tr><td>spacing</td><td colspan=2>z</td><td>2.700000047683716</td></tr>
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<tr><td>summary</td><td>bg</td><td>k</td><td>30.4313</td></tr>
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<tr><td>summary</td><td>bg</td><td>mad</td><td>33.4296</td></tr>
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<tr><td>summary</td><td>bg</td><td>mean</td><td>169.7737</td></tr>
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<tr><td>summary</td><td>bg</td><td>median</td><td>42.0</td></tr>
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<tr><td>summary</td><td>bg</td><td>n</td><td>307709.0</td></tr>
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<tr><td>summary</td><td>bg</td><td>p05</td><td>16.0</td></tr>
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<tr><td>summary</td><td>bg</td><td>p95</td><td>838.0</td></tr>
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<tr><td>summary</td><td>bg</td><td>stdv</td><td>345.3734</td></tr>
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<tr><td>summary</td><td>fg</td><td>k</td><td>2.3356</td></tr>
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<tr><td>summary</td><td>fg</td><td>mad</td><td>544.3854</td></tr>
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<tr><td>summary</td><td>fg</td><td>mean</td><td>3564.2466</td></tr>
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<tr><td>summary</td><td>fg</td><td>median</td><td>3772.0</td></tr>
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<tr><td>summary</td><td>fg</td><td>n</td><td>68835.0</td></tr>
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<tr><td>summary</td><td>fg</td><td>p05</td><td>1149.0</td></tr>
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<tr><td>summary</td><td>fg</td><td>p95</td><td>4689.0</td></tr>
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<tr><td>summary</td><td>fg</td><td>stdv</td><td>985.5736</td></tr>
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<tr><td colspan=3>tsnr</td><td>44.42600126552861</td></tr>
|
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</table>
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|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<div id="qcrating-menu" class="card position-fixed d-none" style="width: 30%; top: 100px; left: 65%; max-height: 85%; overflow-y: auto;">
|
|
<div class="card-header m-0">
|
|
Rating widget
|
|
<button type="button" class="btn-close position-absolute top-0 end-0" aria-label="Close" id="close-qcrating-menu" onclick="toggle_rating()" style="margin: 10px 10px 0 0"></button>
|
|
</div>
|
|
<div class="card-body">
|
|
<div class="accordion">
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcslider-head">
|
|
<button class="accordion-button" type="button" data-bs-toggle="collapse" data-bs-target="#qcslider-collapse" aria-expanded="true" aria-controls="qcslider-collapse">Overall Quality Rating</button>
|
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</h2>
|
|
<div id="qcslider-collapse" class="accordion-collapse collapse show" aria-labelledby="qcslider-head">
|
|
<div class="accordion-body">
|
|
<input type="range" min="1.0" max="4.0" step="0.05" value="2.5" id="qcslider" class="slider">
|
|
<ul class="list-group list-group-horizontal slider-labels" style="width: 100%">
|
|
<li class="list-group-item list-group-item-danger small" style="font-size: 0.7em; width: 25%; text-align:center">Exclude</li>
|
|
<li class="list-group-item list-group-item-warning small" style="font-size: 0.7em; width: 25%; text-align:center">Poor</li>
|
|
<li class="list-group-item list-group-item-primary small" style="font-size: 0.7em; width: 25%; text-align:center">Acceptable</li>
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|
<li class="list-group-item list-group-item-success small" style="font-size: 0.7em; width: 25%; text-align:center">Excellent</li>
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|
</ul>
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</div>
|
|
</div>
|
|
</div>
|
|
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcartifacts-head">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#qcartifacts-collapse" aria-expanded="false" aria-controls="qcartifacts-collapse">
|
|
Record specific artifacts
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|
</button>
|
|
</h2>
|
|
<div id="qcartifacts-collapse" class="accordion-collapse collapse" aria-labelledby="qcartifacts-head">
|
|
<div class="accordion-body">
|
|
<fieldset id="qcartifacts-group" class="form-group">
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="head-motion" id="qcartifacts-item-0" />
|
|
<label class="form-check-label" for="qcartifacts-item-0">Head motion artifacts</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="eye-spillover" id="qcartifacts-item-1" />
|
|
<label class="form-check-label" for="qcartifacts-item-1">Eye spillover through <abbr title="phase-encoding">PE</abbr> axis</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noneye-spillover" id="qcartifacts-item-2" />
|
|
<label class="form-check-label" for="qcartifacts-item-2">Non-eye spillover through <abbr title="phase-encoding">PE</abbr> axis</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="coil-failure" id="qcartifacts-item-3" />
|
|
<label class="form-check-label" for="qcartifacts-item-3">Coil failure</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noise-global" id="qcartifacts-item-4" />
|
|
<label class="form-check-label" for="qcartifacts-item-4">Global noise</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="noise-local" id="qcartifacts-item-5" />
|
|
<label class="form-check-label" for="qcartifacts-item-5">Local noise</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="em-perturbation" id="qcartifacts-item-6" />
|
|
<label class="form-check-label" for="qcartifacts-item-6"><abbr title="electromagnetic">EM</abbr> interference/perturbation</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="wrap-around" id="qcartifacts-item-7" />
|
|
<label class="form-check-label" for="qcartifacts-item-7">Problematic <abbr title="field-of-view">FoV</abbr> prescription / wrap-around</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="ghost-aliasing" id="qcartifacts-item-8" />
|
|
<label class="form-check-label" for="qcartifacts-item-8">Aliasing ghosts</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="ghost-other" id="qcartifacts-item-9" />
|
|
<label class="form-check-label" for="qcartifacts-item-9">Other ghosts (for example, <abbr title="radiofrequency">RF</abbr> spoiling)</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="inu" id="qcartifacts-item-10" />
|
|
<label class="form-check-label" for="qcartifacts-item-10">Intensity non-uniformity (B<sub>1</sub> bias)</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="field-variation" id="qcartifacts-item-11" />
|
|
<label class="form-check-label" for="qcartifacts-item-11">Temporal B<sub>1</sub> field non-uniformity variation</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="processing" id="qcartifacts-item-12" />
|
|
<label class="form-check-label" for="qcartifacts-item-12">Processing such as denoising, defacing or resamplings happened</label>
|
|
</div>
|
|
<div class="form-check form-switch small">
|
|
<input class="form-check-input" type="checkbox" name="uncategorized" id="qcartifacts-item-13" />
|
|
<label class="form-check-label" for="qcartifacts-item-13">Other uncategorized artifact(s)</label>
|
|
</div>
|
|
</fieldset>
|
|
</div> <!-- accordion-body -->
|
|
</div> <!-- accordion-collapse -->
|
|
</div> <!-- accordion-item -->
|
|
<div class="accordion-item">
|
|
<h2 class="accordion-header" id="qcextra-head">
|
|
<button class="accordion-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#qcextra-collapse" aria-expanded="false" aria-controls="qcextra-collapse">
|
|
Extra details
|
|
</button>
|
|
</h2>
|
|
<div id="qcextra-collapse" class="accordion-collapse collapse" aria-labelledby="qcextra-head">
|
|
<div class="accordion-body">
|
|
<div class="input-group">
|
|
<span class="input-group-text">Comments</span>
|
|
<textarea class="form-control" aria-label="Comments" id="qcextra-comments"></textarea>
|
|
</div>
|
|
|
|
<p style="margin-top: 20px; font-weight: bold">Rater confidence</p>
|
|
<input type="range" min="0.0" max="4.0" step="0.05" value="3.5" id="qcextra-confidence" class="slider" style="margin-left: 22%;width: 56%;">
|
|
<ul class="list-group list-group-horizontal slider-labels" style="width: 100%">
|
|
<li class="list-group-item list-group-item-warning small" style="width: 50%; text-align:center">Doubtful</li>
|
|
<li class="list-group-item list-group-item-success bg-success text-white small" style="width: 50%; text-align:center">Confident</li>
|
|
</ul>
|
|
</div> <!-- accordion-body -->
|
|
</div> <!-- accordion-collapse -->
|
|
</div> <!-- accordion-item -->
|
|
</div>
|
|
<div style="margin-top: 10px">
|
|
<a class="btn btn-primary disabled" id="btn-download" href="">Download</a>
|
|
<button class="btn btn-primary" id="btn-post" value="8sSYVI0XjFqacEMZ8wF4" disabled>Share publicly</button>
|
|
</div>
|
|
<script type="text/javascript">
|
|
var MINIMUM_RATING_TIME = 10
|
|
$('#qcslider').on('input', function() {
|
|
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
$('#qcslider-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)bg-\S+/g) || []).join(' ');
|
|
});
|
|
$('#qcslider-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)text-\S+/g) || []).join(' ');
|
|
});
|
|
|
|
if ( $(this).val() < 1.5 ) {
|
|
$('#qcslider-collapse .list-group-item-danger').addClass('bg-danger text-white');
|
|
} else if ( $(this).val() > 3.5 ) {
|
|
$('#qcslider-collapse .list-group-item-success').addClass('bg-success text-white');
|
|
} else if ( $(this).val() < 2.5 ) {
|
|
$('#qcslider-collapse .list-group-item-warning').addClass('bg-warning text-dark');
|
|
} else {
|
|
$('#qcslider-collapse .list-group-item-primary').addClass('bg-primary text-white');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
$('#qcextra-confidence').on('input', function() {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
$('#qcextra-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)bg-\S+/g) || []).join(' ');
|
|
});
|
|
$('#qcextra-collapse .list-group-item').removeClass(function(index, classname) {
|
|
return (classname.match(/(^|\s)text-\S+/g) || []).join(' ');
|
|
});
|
|
|
|
if ( $(this).val() < 2.0 ) {
|
|
$('#qcextra-collapse .list-group-item-warning').addClass('bg-warning text-dark');
|
|
} else {
|
|
$('#qcextra-collapse .list-group-item-success').addClass('bg-success text-white');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
|
|
$('#qcextra-comments').bind('input propertychange', function() {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
});
|
|
|
|
$( '#btn-post' ).click( function() {
|
|
var payload = read_form();
|
|
var md5sum = "unspecified";
|
|
var params = {
|
|
'rating': payload['rating'],
|
|
'md5sum': md5sum,
|
|
'name': "",
|
|
'comment': JSON.stringify(payload['artifacts'])
|
|
};
|
|
|
|
// disable development releases
|
|
var authorization = $(this).val();
|
|
var ratingReq = new XMLHttpRequest();
|
|
ratingReq.open("POST", "https://mriqc.nimh.nih.gov:443/api/v1/rating");
|
|
ratingReq.setRequestHeader("Content-Type", "application/json;charset=UTF-8");
|
|
ratingReq.setRequestHeader("Authorization", authorization);
|
|
ratingReq.onload = function () {
|
|
status = ratingReq.status;
|
|
$('#btn-post').removeClass('btn-primary');
|
|
$('#btn-post').attr('disabled', true);
|
|
$('#btn-post').attr('aria-disabled', true);
|
|
$('#btn-post').prop('disabled');
|
|
$('#btn-post').addClass('disabled');
|
|
$('#btn-post').removeClass('active');
|
|
if (status === "201") {
|
|
$('#btn-post').addClass('btn-success');
|
|
$('#btn-post').html('Posted!');
|
|
} else {
|
|
$('#btn-post').addClass('btn-danger');
|
|
$('#btn-post').html('Failed');
|
|
};
|
|
};
|
|
ratingReq.send(JSON.stringify(params));
|
|
});
|
|
|
|
$( 'body' ).on( 'click', '#qcartifacts-group input', function(e) {
|
|
if ( (Date.now() - timestamp) / 1000 > MINIMUM_RATING_TIME) {
|
|
$('#btn-download').removeClass('disabled');
|
|
$('#btn-download').removeAttr('aria-disabled');
|
|
$('#btn-post').removeAttr('disabled');
|
|
};
|
|
|
|
var payload = read_form();
|
|
});
|
|
|
|
$( 'body' ).on( 'click', '#qcrating-toggler', function(e) {
|
|
toggle_rating();
|
|
});
|
|
</script>
|
|
</div>
|
|
|
|
<script type="text/javascript">
|
|
function toggle(id) {
|
|
var element = document.getElementById(id);
|
|
if(element.style.display == 'block')
|
|
element.style.display = 'none';
|
|
else
|
|
element.style.display = 'block';
|
|
}
|
|
</script>
|
|
</body>
|
|
</html> |