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Felix Hoffstaedter 619fe6eb3d [DATALAD RUNCMD] add QC tables and ROI volumes 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "mkdir rois; \\\n  for sub in sub*; do \\\n    ./code/cat12/xml2csv/xml2csv.py rois/ds004173 $sub; \\\n  done",
 "dsid": "90150bd5-f30d-466d-bc02-120014a29d33",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-23 16:38:28 +02:00
.datalad Register CAT container dataset 2025-10-22 00:37:22 +02:00
code fix postprocessing script 2025-10-23 16:31:47 +02:00
logs add logs 2025-10-23 16:31:13 +02:00
rois [DATALAD RUNCMD] add QC tables and ROI volumes 2025-10-23 16:38:28 +02:00
sourcedata Register ds004173 BIDS dataset as input 2025-10-22 00:37:29 +02:00
sub-000103 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000103 2025-10-22 02:22:58 +02:00
sub-000148 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000148 2025-10-22 02:08:27 +02:00
sub-000149 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000149 2025-10-22 01:51:53 +02:00
sub-000159 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000159 2025-10-22 01:31:31 +02:00
sub-000175 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000175 2025-10-22 01:28:55 +02:00
sub-000179 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000179 2025-10-22 01:52:17 +02:00
sub-000183 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-000183 2025-10-22 01:59:39 +02:00
sub-003617 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-003617 2025-10-22 01:21:17 +02:00
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sub-012059 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-012059 2025-10-22 01:42:44 +02:00
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sub-125171 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-125171 2025-10-22 02:15:42 +02:00
sub-127867 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-127867 2025-10-22 01:51:48 +02:00
sub-132674 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-132674 2025-10-22 02:19:05 +02:00
sub-136038 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-136038 2025-10-22 01:07:59 +02:00
sub-143104 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-143104 2025-10-22 01:55:25 +02:00
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sub-279373 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-279373 2025-10-22 01:48:50 +02:00
sub-281888 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-281888 2025-10-22 02:16:49 +02:00
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sub-292060 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-292060 2025-10-22 02:11:11 +02:00
sub-292213 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-292213 2025-10-22 02:11:24 +02:00
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sub-351288 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-351288 2025-10-22 01:56:18 +02:00
sub-365622 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-365622 2025-10-22 01:47:15 +02:00
sub-367500 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-367500 2025-10-22 01:56:56 +02:00
sub-401697 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-401697 2025-10-22 02:01:11 +02:00
sub-402511 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-402511 2025-10-22 02:16:40 +02:00
sub-407309 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-407309 2025-10-22 01:38:16 +02:00
sub-409228 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-409228 2025-10-22 01:27:57 +02:00
sub-424015 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-424015 2025-10-22 01:30:07 +02:00
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sub-581638 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-581638 2025-10-22 01:39:48 +02:00
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sub-602346 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-602346 2025-10-22 01:50:18 +02:00
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sub-607339 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-607339 2025-10-22 01:59:29 +02:00
sub-607974 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-607974 2025-10-22 01:47:31 +02:00
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sub-672229 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-672229 2025-10-22 02:19:39 +02:00
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sub-680990 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-680990 2025-10-22 01:56:59 +02:00
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sub-691777 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-691777 2025-10-22 01:53:45 +02:00
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sub-707576 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-707576 2025-10-22 01:48:23 +02:00
sub-714347 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-714347 2025-10-22 01:54:56 +02:00
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sub-740606 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-740606 2025-10-22 01:48:01 +02:00
sub-750675 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-750675 2025-10-22 02:01:25 +02:00
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sub-757271 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-757271 2025-10-22 01:54:00 +02:00
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sub-772389 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-772389 2025-10-22 02:11:04 +02:00
sub-778481 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-778481 2025-10-22 02:16:23 +02:00
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sub-791907 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-791907 2025-10-22 01:26:57 +02:00
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sub-811563 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-811563 2025-10-22 02:03:34 +02:00
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sub-848092 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-848092 2025-10-22 01:48:16 +02:00
sub-862915 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-862915 2025-10-22 02:07:39 +02:00
sub-865293 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-865293 2025-10-22 01:59:38 +02:00
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sub-926536 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-926536 2025-10-22 02:03:38 +02:00
sub-927452 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-927452 2025-10-22 01:52:08 +02:00
sub-938344 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-938344 2025-10-22 01:50:55 +02:00
sub-945122 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-945122 2025-10-22 01:53:43 +02:00
sub-945652 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-945652 2025-10-22 01:46:57 +02:00
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sub-966788 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-966788 2025-10-22 02:17:09 +02:00
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sub-987325 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-987325 2025-10-22 01:56:39 +02:00
sub-988484 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-988484 2025-10-22 01:51:58 +02:00
sub-988653 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-988653 2025-10-22 01:47:31 +02:00
sub-992121 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-992121 2025-10-22 01:42:36 +02:00
sub-992238 [DATALAD RUNCMD] Compute CAT12.9 QC for sub-992238 2025-10-22 02:18:46 +02:00
.gitattributes keep text files in git 2025-10-22 00:37:17 +02:00
.gitignore SLURM submission setup 2025-10-22 00:37:34 +02:00
.gitmodules Register ds004173 BIDS dataset as input 2025-10-22 00:37:29 +02:00
CHANGELOG.md Apply YODA dataset setup 2025-10-22 00:37:17 +02:00
QC_IQMs.csv [DATALAD RUNCMD] add QC tables and ROI volumes 2025-10-23 16:38:28 +02:00
QC_mod0GM.csv [DATALAD RUNCMD] Estimate sample homogeneity of non-linear only modulated GM 2025-10-23 16:38:00 +02:00
QC_modGM.csv [DATALAD RUNCMD] Estimate sample homogeneity of modulated GM 2025-10-23 16:36:12 +02:00
README.md Apply YODA dataset setup 2025-10-22 00:37:17 +02:00

README.md

Project

Dataset structure

  • All inputs (i.e. building blocks from other sources) are located in inputs/.
  • All custom code is located in code/.