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ds003011-mriqc/logs/duct/sub-02_2025.11.03T23.00.08-440046_stdout
Felix Hoffstaedter 4b7a43d739 [DATALAD RUNCMD] Compute MRIQC for sub-02 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-02 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "da0c85a0-2b92-4a82-8e80-1dcfc88fc18a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-02",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-11-04 01:19:52 +01:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_436542/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-11-03 22:00:10 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 't1w'...
2025-11-03 22:00:10 | IMPORTANT | mriqc | File size ('t1w'): 0.02|0.02 GB [maximum|average].
2025-11-03 22:00:10 | IMPORTANT | mriqc | Extracting metadata and entities for 4 input runs of modality 'bold'...
2025-11-03 22:00:10 | IMPORTANT | mriqc | File size ('bold'): 0.04|0.04 GB [maximum|average].
2025-11-03 22:00:10 | IMPORTANT | mriqc | Extracting metadata and entities for 4 input runs of modality 'dwi'...
2025-11-03 22:00:11 | IMPORTANT | mriqc | File size ('dwi'): 0.08|0.07 GB [maximum|average].
2025-11-03 22:00:11 | INFO | mriqc | MRIQC config file: /tmp/config-20251103-220009_93a950b0-217e-4951-a756-8505c87f1f25.toml.
2025-11-03 22:00:14 | INFO | matplotlib.font_manager | generated new fontManager
2025-11-03 22:00:15 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-11-03 22:00:16 | INFO | nipype.workflow | Building functional MRIQC workflow for 4 BOLD runs..
2025-11-03 22:00:16 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-11-03 22:00:16 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 6 NIfTI files..
2025-11-03 22:00:20 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-11-03 22:00:24 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-11-03 22:00:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/1f00141d9e27611cdca52365a9eb4b7646d65608/conform".
2025-11-03 22:00:24 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-11-03 22:00:25 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.712355s.
2025-11-03 22:00:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/0b18a9418b28060373aead1b7951a10f77778d77/conform".
2025-11-03 22:00:26 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-11-03 22:00:27 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.802074s.
2025-11-03 22:00:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/1b6c98d3f6920d7637695e72ec4e22abbe165696/conform".
2025-11-03 22:00:28 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-11-03 22:00:29 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.802582s.
2025-11-03 22:00:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/conform".
2025-11-03 22:00:30 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-11-03 22:00:31 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.807709s.
2025-11-03 22:00:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/9034a5eb4256b9feba69d1763cf57a6d4e9904db/conform".
2025-11-03 22:00:32 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-11-03 22:00:33 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.82496s.
2025-11-03 22:00:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/64db8acaa860660c55960618e0a8ccf454836a0b/conform".
2025-11-03 22:00:34 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-11-03 22:00:35 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.8549s.
2025-11-03 22:00:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/sanitize".
2025-11-03 22:00:36 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:00:36 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.038729s.
2025-11-03 22:00:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/load_bmat".
2025-11-03 22:00:38 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-11-03 22:00:38 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.14324s.
2025-11-03 22:00:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1ebad27f1e7597fb01897040ffb510763dd05b7d/provenance".
2025-11-03 22:00:40 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:00:40 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.118086s.
2025-11-03 22:00:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/sanitize".
2025-11-03 22:00:40 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:00:43 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 2.411606s.
2025-11-03 22:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/load_bmat".
2025-11-03 22:00:44 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-11-03 22:00:44 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020527s.
2025-11-03 22:00:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/provenance".
2025-11-03 22:00:46 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:00:46 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.113814s.
2025-11-03 22:00:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/sanitize".
2025-11-03 22:00:46 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:00:46 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.03976s.
2025-11-03 22:00:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/load_bmat".
2025-11-03 22:00:48 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-11-03 22:00:48 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020416s.
2025-11-03 22:00:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7f40ffdb111de4d1676884968b65187121f8dbe2/provenance".
2025-11-03 22:00:50 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:00:50 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.131541s.
2025-11-03 22:00:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/sanitize".
2025-11-03 22:00:50 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:00:53 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 2.569402s.
2025-11-03 22:00:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/load_bmat".
2025-11-03 22:00:54 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-11-03 22:00:54 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021178s.
2025-11-03 22:00:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/provenance".
2025-11-03 22:00:56 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:00:56 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.121791s.
2025-11-03 22:00:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/provenance/mapflow/_provenance0".
2025-11-03 22:00:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:00:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.072852s.
2025-11-03 22:00:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/pick_echo".
2025-11-03 22:00:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-11-03 22:00:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000154s.
2025-11-03 22:00:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/provenance/mapflow/_provenance0".
2025-11-03 22:00:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:00:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.065074s.
2025-11-03 22:00:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/pick_echo".
2025-11-03 22:00:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-11-03 22:00:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000148s.
2025-11-03 22:01:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/provenance/mapflow/_provenance0".
2025-11-03 22:01:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:01:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.087944s.
2025-11-03 22:01:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/pick_echo".
2025-11-03 22:01:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-11-03 22:01:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000146s.
2025-11-03 22:01:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/provenance/mapflow/_provenance0".
2025-11-03 22:01:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 22:01:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.06456s.
2025-11-03 22:01:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/pick_echo".
2025-11-03 22:01:02 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-11-03 22:01:02 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000152s.
2025-11-03 22:01:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/pre_clip".
2025-11-03 22:01:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:01:23 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 18.558532s.
2025-11-03 22:01:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/1f00141d9e27611cdca52365a9eb4b7646d65608/RotationMask".
2025-11-03 22:01:24 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-11-03 22:01:25 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.852131s.
2025-11-03 22:01:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotMosaicNoise".
2025-11-03 22:01:26 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:01:32 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.372717s.
2025-11-03 22:01:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0b18a9418b28060373aead1b7951a10f77778d77/pre_clip".
2025-11-03 22:01:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:01:52 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 20.283892s.
2025-11-03 22:01:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/0b18a9418b28060373aead1b7951a10f77778d77/RotationMask".
2025-11-03 22:01:54 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-11-03 22:01:55 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.847428s.
2025-11-03 22:01:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotMosaicNoise".
2025-11-03 22:01:56 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:02:04 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 7.760102s.
2025-11-03 22:02:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/pre_clip".
2025-11-03 22:02:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:02:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 20.309008s.
2025-11-03 22:02:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/1b6c98d3f6920d7637695e72ec4e22abbe165696/RotationMask".
2025-11-03 22:02:26 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-11-03 22:02:27 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.81785s.
2025-11-03 22:02:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotMosaicNoise".
2025-11-03 22:02:28 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:02:36 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 7.656396s.
2025-11-03 22:02:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/pre_clip".
2025-11-03 22:02:36 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:02:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 20.312356s.
2025-11-03 22:02:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/RotationMask".
2025-11-03 22:02:58 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-11-03 22:02:59 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.851279s.
2025-11-03 22:03:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotMosaicNoise".
2025-11-03 22:03:00 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:03:08 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 7.668536s.
2025-11-03 22:03:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/pre_clip".
2025-11-03 22:03:08 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:03:29 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 20.396196s.
2025-11-03 22:03:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/9034a5eb4256b9feba69d1763cf57a6d4e9904db/RotationMask".
2025-11-03 22:03:30 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-11-03 22:03:31 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.843547s.
2025-11-03 22:03:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotMosaicNoise".
2025-11-03 22:03:32 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:03:40 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 7.644979s.
2025-11-03 22:03:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/64db8acaa860660c55960618e0a8ccf454836a0b/pre_clip".
2025-11-03 22:03:40 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:04:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 20.653728s.
2025-11-03 22:04:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/64db8acaa860660c55960618e0a8ccf454836a0b/RotationMask".
2025-11-03 22:04:02 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-11-03 22:04:03 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.845437s.
2025-11-03 22:04:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotMosaicNoise".
2025-11-03 22:04:04 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:04:12 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 7.463816s.
2025-11-03 22:04:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/piesno".
2025-11-03 22:04:12 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-11-03 22:04:26 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 13.716543s.
2025-11-03 22:04:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/shells".
2025-11-03 22:04:26 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-11-03 22:04:26 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000653s.
2025-11-03 22:04:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/piesno".
2025-11-03 22:04:28 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-11-03 22:04:45 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 16.672097s.
2025-11-03 22:04:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/shells".
2025-11-03 22:04:46 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-11-03 22:04:46 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000658s.
2025-11-03 22:04:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/piesno".
2025-11-03 22:04:48 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-11-03 22:05:06 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 18.006463s.
2025-11-03 22:05:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/shells".
2025-11-03 22:05:08 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-11-03 22:05:08 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000644s.
2025-11-03 22:05:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/piesno".
2025-11-03 22:05:10 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-11-03 22:05:21 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 10.647101s.
2025-11-03 22:05:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/shells".
2025-11-03 22:05:22 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-11-03 22:05:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000707s.
2025-11-03 22:05:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/non_steady_state_detector".
2025-11-03 22:05:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-11-03 22:05:24 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.211135s.
2025-11-03 22:05:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/non_steady_state_detector".
2025-11-03 22:05:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-11-03 22:05:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.200483s.
2025-11-03 22:05:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/non_steady_state_detector".
2025-11-03 22:05:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-11-03 22:05:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.200359s.
2025-11-03 22:05:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/non_steady_state_detector".
2025-11-03 22:05:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-11-03 22:05:30 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.20085s.
2025-11-03 22:05:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/pre_n4".
2025-11-03 22:05:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:07:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 115.55804s.
2025-11-03 22:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_background".
2025-11-03 22:07:30 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:07:30 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.006865s.
2025-11-03 22:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0b18a9418b28060373aead1b7951a10f77778d77/pre_n4".
2025-11-03 22:07:30 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:09:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 138.09584s.
2025-11-03 22:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_background".
2025-11-03 22:09:50 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:09:50 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.00416s.
2025-11-03 22:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/pre_n4".
2025-11-03 22:09:51 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:12:09 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 138.305563s.
2025-11-03 22:12:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_background".
2025-11-03 22:12:10 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:12:10 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.004123s.
2025-11-03 22:12:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/pre_n4".
2025-11-03 22:12:11 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:14:29 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 138.275312s.
2025-11-03 22:14:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_background".
2025-11-03 22:14:31 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:14:31 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.003933s.
2025-11-03 22:14:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/pre_n4".
2025-11-03 22:14:31 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:16:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 138.279087s.
2025-11-03 22:16:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_background".
2025-11-03 22:16:51 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:16:51 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.003909s.
2025-11-03 22:16:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/64db8acaa860660c55960618e0a8ccf454836a0b/pre_n4".
2025-11-03 22:16:51 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:19:09 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 138.368638s.
2025-11-03 22:19:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_background".
2025-11-03 22:19:11 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:19:11 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.003953s.
2025-11-03 22:19:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/dwi_ref".
2025-11-03 22:19:11 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-11-03 22:19:12 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.187961s.
2025-11-03 22:19:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/get_lowb".
2025-11-03 22:19:13 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-03 22:19:14 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.831638s.
2025-11-03 22:19:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/dwi_ref".
2025-11-03 22:19:15 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-11-03 22:19:16 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.1303779999999999s.
2025-11-03 22:19:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/get_lowb".
2025-11-03 22:19:17 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-03 22:19:17 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.690698s.
2025-11-03 22:19:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/dwi_ref".
2025-11-03 22:19:19 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-11-03 22:19:20 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.364037s.
2025-11-03 22:19:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/get_lowb".
2025-11-03 22:19:21 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-03 22:19:22 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.881065s.
2025-11-03 22:19:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/dwi_ref".
2025-11-03 22:19:23 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-11-03 22:19:24 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.176329s.
2025-11-03 22:19:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/get_lowb".
2025-11-03 22:19:25 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-03 22:19:25 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.713727s.
2025-11-03 22:19:27 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/sanitize/mapflow/_sanitize0".
2025-11-03 22:19:27 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:19:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 2.015124s.
2025-11-03 22:19:31 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/sanitize/mapflow/_sanitize0".
2025-11-03 22:19:31 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:19:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.5338180000000001s.
2025-11-03 22:19:33 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/sanitize/mapflow/_sanitize0".
2025-11-03 22:19:33 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:19:33 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.041292s.
2025-11-03 22:19:35 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/sanitize/mapflow/_sanitize0".
2025-11-03 22:19:35 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-11-03 22:19:36 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.536343s.
2025-11-03 22:19:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/synthstrip".
2025-11-03 22:19:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:20:20 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.21611s.
2025-11-03 22:20:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0b18a9418b28060373aead1b7951a10f77778d77/synthstrip".
2025-11-03 22:20:21 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:21:15 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 54.25493s.
2025-11-03 22:21:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/synthstrip".
2025-11-03 22:21:17 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:22:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 54.230283s.
2025-11-03 22:22:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/synthstrip".
2025-11-03 22:22:13 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:23:07 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 54.120645s.
2025-11-03 22:23:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/synthstrip".
2025-11-03 22:23:09 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:24:20 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 70.721997s.
2025-11-03 22:24:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/64db8acaa860660c55960618e0a8ccf454836a0b/synthstrip".
2025-11-03 22:24:21 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:25:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 63.407941s.
2025-11-03 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/pre_clip".
2025-11-03 22:25:25 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:25:26 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 1.491625s.
2025-11-03 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/SharpenEPI".
2025-11-03 22:25:27 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:25:37 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 9.670203s.
2025-11-03 22:25:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/hmc_b0".
2025-11-03 22:25:37 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:25:53 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 16.384944s.
2025-11-03 22:25:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/pre_clip".
2025-11-03 22:25:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:25:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 1.692085s.
2025-11-03 22:25:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/SharpenEPI".
2025-11-03 22:25:57 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:26:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 9.625262s.
2025-11-03 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/hmc_b0".
2025-11-03 22:26:07 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:26:28 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.739531s.
2025-11-03 22:26:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/pre_clip".
2025-11-03 22:26:29 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:26:31 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 1.891202s.
2025-11-03 22:26:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/SharpenEPI".
2025-11-03 22:26:33 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:26:44 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 10.792208s.
2025-11-03 22:26:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/hmc_b0".
2025-11-03 22:26:45 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:27:08 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 23.114355s.
2025-11-03 22:27:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/pre_clip".
2025-11-03 22:27:09 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 22:27:11 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 1.674067s.
2025-11-03 22:27:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/SharpenEPI".
2025-11-03 22:27:11 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:27:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 9.610386s.
2025-11-03 22:27:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/hmc_b0".
2025-11-03 22:27:21 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:27:41 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.160102s.
2025-11-03 22:27:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/estimate_hm".
2025-11-03 22:27:43 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:30:04 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 140.771046s.
2025-11-03 22:30:05 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/SpikesMask/mapflow/_SpikesMask0".
2025-11-03 22:30:05 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:30:06 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.410725s.
2025-11-03 22:30:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/estimate_hm".
2025-11-03 22:30:07 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:32:19 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 132.268167s.
2025-11-03 22:32:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/SpikesMask/mapflow/_SpikesMask0".
2025-11-03 22:32:21 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:32:22 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.435574s.
2025-11-03 22:32:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/estimate_hm".
2025-11-03 22:32:23 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:34:37 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 133.852033s.
2025-11-03 22:34:37 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/SpikesMask/mapflow/_SpikesMask0".
2025-11-03 22:34:37 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:34:39 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.4579710000000001s.
2025-11-03 22:34:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/estimate_hm".
2025-11-03 22:34:39 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 22:36:53 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 133.950771s.
2025-11-03 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/SpikesMask/mapflow/_SpikesMask0".
2025-11-03 22:36:55 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:36:57 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.418733s.
2025-11-03 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/post_n4".
2025-11-03 22:36:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:37:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 34.262933s.
2025-11-03 22:37:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1f00141d9e27611cdca52365a9eb4b7646d65608/smoothness".
2025-11-03 22:37:33 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 22:37:40 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 6.554402s.
2025-11-03 22:37:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotMosaicZoomed".
2025-11-03 22:37:41 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:37:46 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.014963s.
2025-11-03 22:37:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotBrainmask".
2025-11-03 22:37:47 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 22:37:51 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.761422s.
2025-11-03 22:37:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0b18a9418b28060373aead1b7951a10f77778d77/post_n4".
2025-11-03 22:37:51 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:38:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 34.862137s.
2025-11-03 22:38:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0b18a9418b28060373aead1b7951a10f77778d77/smoothness".
2025-11-03 22:38:27 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 22:38:34 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 6.831853s.
2025-11-03 22:38:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotMosaicZoomed".
2025-11-03 22:38:35 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:38:40 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.132143s.
2025-11-03 22:38:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotBrainmask".
2025-11-03 22:38:41 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 22:38:47 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 5.388036s.
2025-11-03 22:38:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/post_n4".
2025-11-03 22:38:47 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:39:22 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 34.731502s.
2025-11-03 22:39:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1b6c98d3f6920d7637695e72ec4e22abbe165696/smoothness".
2025-11-03 22:39:23 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 22:39:30 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 6.851229s.
2025-11-03 22:39:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotMosaicZoomed".
2025-11-03 22:39:31 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:39:36 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.068799s.
2025-11-03 22:39:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotBrainmask".
2025-11-03 22:39:37 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 22:39:43 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 5.471363s.
2025-11-03 22:39:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/post_n4".
2025-11-03 22:39:43 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:40:18 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 34.824339s.
2025-11-03 22:40:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/smoothness".
2025-11-03 22:40:19 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 22:40:26 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 6.887314s.
2025-11-03 22:40:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotMosaicZoomed".
2025-11-03 22:40:27 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:40:32 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.1507s.
2025-11-03 22:40:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotBrainmask".
2025-11-03 22:40:33 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 22:40:39 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 5.411622s.
2025-11-03 22:40:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/post_n4".
2025-11-03 22:40:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:41:15 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 35.24382s.
2025-11-03 22:41:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9034a5eb4256b9feba69d1763cf57a6d4e9904db/smoothness".
2025-11-03 22:41:15 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 22:41:22 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 6.754627s.
2025-11-03 22:41:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotMosaicZoomed".
2025-11-03 22:41:23 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:41:28 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.112641s.
2025-11-03 22:41:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotBrainmask".
2025-11-03 22:41:29 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 22:41:35 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 5.398263s.
2025-11-03 22:41:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/64db8acaa860660c55960618e0a8ccf454836a0b/post_n4".
2025-11-03 22:41:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:42:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 35.324013s.
2025-11-03 22:42:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/64db8acaa860660c55960618e0a8ccf454836a0b/smoothness".
2025-11-03 22:42:11 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 22:42:18 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 7.004085s.
2025-11-03 22:42:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotMosaicZoomed".
2025-11-03 22:42:19 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 22:42:25 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.256615s.
2025-11-03 22:42:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotBrainmask".
2025-11-03 22:42:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 22:42:31 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 5.507015s.
2025-11-03 22:42:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/pre_n4".
2025-11-03 22:42:31 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:42:41 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 9.616952s.
2025-11-03 22:42:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/pre_n4".
2025-11-03 22:42:41 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:42:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 9.602872s.
2025-11-03 22:42:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/pre_n4".
2025-11-03 22:42:51 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:43:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 10.74035s.
2025-11-03 22:43:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/pre_n4".
2025-11-03 22:43:03 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:43:13 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 9.603035s.
2025-11-03 22:43:13 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/apply_hmc/mapflow/_apply_hmc0".
2025-11-03 22:43:13 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:43:25 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.839881s.
2025-11-03 22:43:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ComputeFD".
2025-11-03 22:43:25 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-03 22:43:25 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002339s.
2025-11-03 22:43:27 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-11-03 22:43:27 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-11-03 22:43:28 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.588169s.
2025-11-03 22:43:29 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/apply_hmc/mapflow/_apply_hmc0".
2025-11-03 22:43:29 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:43:40 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.133749s.
2025-11-03 22:43:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ComputeFD".
2025-11-03 22:43:41 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-03 22:43:41 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005314s.
2025-11-03 22:43:43 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-11-03 22:43:43 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-11-03 22:43:44 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.531296s.
2025-11-03 22:43:45 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/apply_hmc/mapflow/_apply_hmc0".
2025-11-03 22:43:45 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:43:57 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.365335s.
2025-11-03 22:43:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ComputeFD".
2025-11-03 22:43:57 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-03 22:43:57 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002298s.
2025-11-03 22:43:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-11-03 22:43:59 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-11-03 22:44:00 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.541717s.
2025-11-03 22:44:01 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/apply_hmc/mapflow/_apply_hmc0".
2025-11-03 22:44:01 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 22:44:13 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.217714s.
2025-11-03 22:44:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ComputeFD".
2025-11-03 22:44:13 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-03 22:44:13 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.0023s.
2025-11-03 22:44:15 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-11-03 22:44:15 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-11-03 22:44:16 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.504155s.
2025-11-03 22:44:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/final_masked".
2025-11-03 22:44:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 22:44:18 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.407419s.
2025-11-03 22:44:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization".
2025-11-03 22:44:19 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:44:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:45:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-11-03 22:45:21 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:45:34 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:45:36 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-11-03 22:45:36 | INFO | niworkflows | Generating visual report
2025-11-03 22:45:50 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 90.781324s.
2025-11-03 22:45:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_zoomed".
2025-11-03 22:45:51 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:45:51 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004372s.
2025-11-03 22:45:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_bmask".
2025-11-03 22:45:52 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:45:52 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003985s.
2025-11-03 22:45:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0b18a9418b28060373aead1b7951a10f77778d77/final_masked".
2025-11-03 22:45:52 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 22:45:52 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.455437s.
2025-11-03 22:45:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization".
2025-11-03 22:45:53 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:45:55 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:46:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-11-03 22:46:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:47:13 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:47:15 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-11-03 22:47:15 | INFO | niworkflows | Generating visual report
2025-11-03 22:47:29 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 95.536528s.
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_zoomed".
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003944s.
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_bmask".
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00389s.
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/final_masked".
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 22:47:30 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.426975s.
2025-11-03 22:47:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization".
2025-11-03 22:47:32 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:47:33 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:48:35 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/stderr.nipype-init).
2025-11-03 22:48:35 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-11-03 22:48:35 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:48:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:48:52 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-11-03 22:48:52 | INFO | niworkflows | Generating visual report
2025-11-03 22:49:06 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 94.590523s.
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_zoomed".
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004118s.
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_bmask".
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003914s.
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/final_masked".
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 22:49:08 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.425638s.
2025-11-03 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization".
2025-11-03 22:49:10 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:49:11 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:50:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-11-03 22:50:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:50:28 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:50:30 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-11-03 22:50:30 | INFO | niworkflows | Generating visual report
2025-11-03 22:50:45 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 94.97012s.
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_zoomed".
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.00407s.
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_bmask".
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003897s.
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/final_masked".
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 22:50:46 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.459203s.
2025-11-03 22:50:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization".
2025-11-03 22:50:48 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:50:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:51:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-11-03 22:51:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:52:07 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:52:09 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-11-03 22:52:09 | INFO | niworkflows | Generating visual report
2025-11-03 22:52:23 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 95.594454s.
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_zoomed".
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003913s.
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_bmask".
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00406s.
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/64db8acaa860660c55960618e0a8ccf454836a0b/final_masked".
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 22:52:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.431347s.
2025-11-03 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization".
2025-11-03 22:52:26 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:52:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:53:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-11-03 22:53:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:53:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:53:45 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-11-03 22:53:45 | INFO | niworkflows | Generating visual report
2025-11-03 22:53:59 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 93.547982s.
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_zoomed".
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003941s.
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_bmask".
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004009s.
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/synthstrip".
2025-11-03 22:54:00 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:54:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 34.454162s.
2025-11-03 22:54:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/synthstrip".
2025-11-03 22:54:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:55:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.474247s.
2025-11-03 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/synthstrip".
2025-11-03 22:55:26 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:56:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.3992s.
2025-11-03 22:56:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/synthstrip".
2025-11-03 22:56:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 22:57:04 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.874099s.
2025-11-03 22:57:04 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/mean/mapflow/_mean0".
2025-11-03 22:57:04 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-11-03 22:57:05 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.865491s.
2025-11-03 22:57:06 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/compute_tsnr/mapflow/_compute_tsnr0".
2025-11-03 22:57:06 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-11-03 22:57:06 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.632268s.
2025-11-03 22:57:08 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/quality/mapflow/_quality0".
2025-11-03 22:57:08 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-11-03 22:57:10 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.906829s.
2025-11-03 22:57:12 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/mean/mapflow/_mean0".
2025-11-03 22:57:12 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-11-03 22:57:13 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.696814s.
2025-11-03 22:57:14 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c8a110828384b39c265af3aca4c938b0ff7ceeb2/compute_tsnr/mapflow/_compute_tsnr0".
2025-11-03 22:57:14 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-11-03 22:57:14 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.539149s.
2025-11-03 22:57:16 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/quality/mapflow/_quality0".
2025-11-03 22:57:16 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-11-03 22:57:18 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.703878s.
2025-11-03 22:57:18 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/mean/mapflow/_mean0".
2025-11-03 22:57:18 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-11-03 22:57:19 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.693913s.
2025-11-03 22:57:20 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/compute_tsnr/mapflow/_compute_tsnr0".
2025-11-03 22:57:20 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-11-03 22:57:20 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.546248s.
2025-11-03 22:57:22 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/quality/mapflow/_quality0".
2025-11-03 22:57:22 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-11-03 22:57:24 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.738434s.
2025-11-03 22:57:24 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/mean/mapflow/_mean0".
2025-11-03 22:57:24 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-11-03 22:57:25 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.72637s.
2025-11-03 22:57:26 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/compute_tsnr/mapflow/_compute_tsnr0".
2025-11-03 22:57:26 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-11-03 22:57:26 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.576748s.
2025-11-03 22:57:28 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/quality/mapflow/_quality0".
2025-11-03 22:57:28 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.727752s.
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_norm".
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004047s.
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_norm".
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004076s.
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_norm".
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003913s.
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_norm".
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003896s.
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_norm".
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003955s.
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_norm".
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 22:57:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003904s.
2025-11-03 22:57:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/post_n4".
2025-11-03 22:57:31 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:57:34 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 3.242856s.
2025-11-03 22:57:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/sp_mask".
2025-11-03 22:57:36 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-11-03 22:57:43 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 6.73174s.
2025-11-03 22:57:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/drift".
2025-11-03 22:57:44 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-11-03 22:57:44 | INFO | nipype.interface | Correcting drift with 5 b=0 volumes, with global signal estimated at 1.0, 0.9993, 1.0, 0.9987, 0.9987.
2025-11-03 22:57:48 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 3.811311s.
2025-11-03 22:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/EPI2MNI".
2025-11-03 22:57:48 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:57:48 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 22:58:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 22:58:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/SharpenEPI/sub-02_ses-Y3CMH_run-1_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/SharpenEPI/sub-02_ses-Y3CMH_run-1_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/SharpenEPI/sub-02_ses-Y3CMH_run-1_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 22:59:10 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 22:59:10 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 22:59:10 | INFO | niworkflows | Generating visual report
2025-11-03 22:59:25 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 96.89128s.
2025-11-03 22:59:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/post_n4".
2025-11-03 22:59:26 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 22:59:29 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.788724s.
2025-11-03 22:59:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/sp_mask".
2025-11-03 22:59:30 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-11-03 22:59:36 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 5.6065249999999995s.
2025-11-03 22:59:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/drift".
2025-11-03 22:59:36 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-11-03 22:59:36 | INFO | nipype.interface | Correcting drift with 6 b=0 volumes, with global signal estimated at 1.0, 1.0, 1.0, 1.0, 1.0, 1.0.
2025-11-03 22:59:40 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 4.30528s.
2025-11-03 22:59:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/EPI2MNI".
2025-11-03 22:59:42 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 22:59:42 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:00:11 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:00:11 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/SharpenEPI/sub-02_ses-Y3MRP_run-1_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/SharpenEPI/sub-02_ses-Y3MRP_run-1_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/SharpenEPI/sub-02_ses-Y3MRP_run-1_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:01:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:01:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:01:08 | INFO | niworkflows | Generating visual report
2025-11-03 23:01:23 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 101.026559s.
2025-11-03 23:01:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/post_n4".
2025-11-03 23:01:24 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:01:27 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 3.331495s.
2025-11-03 23:01:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/sp_mask".
2025-11-03 23:01:28 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-11-03 23:01:34 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 6.372093s.
2025-11-03 23:01:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/drift".
2025-11-03 23:01:36 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-11-03 23:01:36 | INFO | nipype.interface | Correcting drift with 6 b=0 volumes, with global signal estimated at 1.0, 1.0023, 1.0023, 1.0046, 1.0023, 1.0023.
2025-11-03 23:01:40 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 4.49517s.
2025-11-03 23:01:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/EPI2MNI".
2025-11-03 23:01:42 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 23:01:42 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:02:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/EPI2MNI/stderr.nipype-init).
2025-11-03 23:02:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:02:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/SharpenEPI/sub-02_ses-Y3ZHP_run-1_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/SharpenEPI/sub-02_ses-Y3ZHP_run-1_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/SharpenEPI/sub-02_ses-Y3ZHP_run-1_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:03:10 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:03:10 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:03:10 | INFO | niworkflows | Generating visual report
2025-11-03 23:03:24 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 102.485485s.
2025-11-03 23:03:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/post_n4".
2025-11-03 23:03:26 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:03:29 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 3.196485s.
2025-11-03 23:03:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/sp_mask".
2025-11-03 23:03:30 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-11-03 23:03:37 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 6.681928s.
2025-11-03 23:03:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/drift".
2025-11-03 23:03:38 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-11-03 23:03:38 | INFO | nipype.interface | Correcting drift with 6 b=0 volumes, with global signal estimated at 1.0, 1.0, 1.0, 1.0, 1.0, 0.9976.
2025-11-03 23:03:42 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 4.03114s.
2025-11-03 23:03:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/EPI2MNI".
2025-11-03 23:03:44 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 23:03:44 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:04:08 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:04:08 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/SharpenEPI/sub-02_ses-Y4CMP_run-1_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/SharpenEPI/sub-02_ses-Y4CMP_run-1_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/SharpenEPI/sub-02_ses-Y4CMP_run-1_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:05:03 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:05:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:05:03 | INFO | niworkflows | Generating visual report
2025-11-03 23:05:18 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.604145s.
2025-11-03 23:05:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/pre_clip".
2025-11-03 23:05:18 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 23:05:18 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.255637s.
2025-11-03 23:05:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/SharpenEPI".
2025-11-03 23:05:20 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:05:22 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.767774s.
2025-11-03 23:05:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-11-03 23:05:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.972962s.
2025-11-03 23:05:24 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-11-03 23:05:24 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:25 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.029333s.
2025-11-03 23:05:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-11-03 23:05:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.025159s.
2025-11-03 23:05:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/pre_clip".
2025-11-03 23:05:28 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 23:05:28 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.248449s.
2025-11-03 23:05:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/SharpenEPI".
2025-11-03 23:05:30 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:05:32 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.705791s.
2025-11-03 23:05:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-11-03 23:05:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.799253s.
2025-11-03 23:05:34 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-11-03 23:05:34 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.657328s.
2025-11-03 23:05:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-11-03 23:05:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.115432s.
2025-11-03 23:05:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/pre_clip".
2025-11-03 23:05:38 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 23:05:38 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.278732s.
2025-11-03 23:05:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/SharpenEPI".
2025-11-03 23:05:40 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:05:42 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.677837s.
2025-11-03 23:05:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-11-03 23:05:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.843428s.
2025-11-03 23:05:44 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-11-03 23:05:44 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:45 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.683779s.
2025-11-03 23:05:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-11-03 23:05:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:47 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.112496s.
2025-11-03 23:05:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/pre_clip".
2025-11-03 23:05:48 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-11-03 23:05:48 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.252464s.
2025-11-03 23:05:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/SharpenEPI".
2025-11-03 23:05:50 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:05:52 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6718030000000002s.
2025-11-03 23:05:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-11-03 23:05:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.841844s.
2025-11-03 23:05:54 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-11-03 23:05:54 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.66287s.
2025-11-03 23:05:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-11-03 23:05:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:05:57 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.096421s.
2025-11-03 23:05:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/final_masked".
2025-11-03 23:05:58 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:05:58 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.069584s.
2025-11-03 23:06:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/dwidenoise".
2025-11-03 23:06:00 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-11-03 23:06:57 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 56.550496s.
2025-11-03 23:06:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1ebad27f1e7597fb01897040ffb510763dd05b7d/ResampleSegmentation".
2025-11-03 23:06:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:07:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 5.184685s.
2025-11-03 23:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/final_masked".
2025-11-03 23:07:04 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:07:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.067952s.
2025-11-03 23:07:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/dwidenoise".
2025-11-03 23:07:06 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-11-03 23:07:51 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 45.216179s.
2025-11-03 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ResampleSegmentation".
2025-11-03 23:07:52 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:07:56 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.932361s.
2025-11-03 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/final_masked".
2025-11-03 23:07:58 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:07:58 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.074593s.
2025-11-03 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/dwidenoise".
2025-11-03 23:08:00 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-11-03 23:08:56 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 56.243349s.
2025-11-03 23:08:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7f40ffdb111de4d1676884968b65187121f8dbe2/ResampleSegmentation".
2025-11-03 23:08:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:09:04 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 5.716226s.
2025-11-03 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/final_masked".
2025-11-03 23:09:04 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:09:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.074089s.
2025-11-03 23:09:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/dwidenoise".
2025-11-03 23:09:06 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-11-03 23:10:01 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 54.983098s.
2025-11-03 23:10:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ResampleSegmentation".
2025-11-03 23:10:02 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:10:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.849194s.
2025-11-03 23:10:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/pre_n4".
2025-11-03 23:10:08 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.756364s.
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_mean/mapflow/_ds_report_mean0".
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00438s.
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_background/mapflow/_ds_report_background0".
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00419s.
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004193s.
2025-11-03 23:10:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/pre_n4".
2025-11-03 23:10:11 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:10:12 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5964450000000001s.
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_mean/mapflow/_ds_report_mean0".
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004146s.
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_background/mapflow/_ds_report_background0".
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004125s.
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004126s.
2025-11-03 23:10:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/pre_n4".
2025-11-03 23:10:15 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:10:16 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.616673s.
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_mean/mapflow/_ds_report_mean0".
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004241s.
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_background/mapflow/_ds_report_background0".
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004247s.
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004233s.
2025-11-03 23:10:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/pre_n4".
2025-11-03 23:10:19 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:10:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5997059999999999s.
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_mean/mapflow/_ds_report_mean0".
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004304s.
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_background/mapflow/_ds_report_background0".
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004123s.
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:10:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004146s.
2025-11-03 23:10:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/dwimodel".
2025-11-03 23:10:23 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-11-03 23:10:30 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 7.5852450000000005s.
2025-11-03 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1ebad27f1e7597fb01897040ffb510763dd05b7d/estimate_sigma".
2025-11-03 23:10:32 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:10:32 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.054156s.
2025-11-03 23:10:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/get_wm".
2025-11-03 23:10:34 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:10:34 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.045708s.
2025-11-03 23:10:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/dwimodel".
2025-11-03 23:10:36 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-11-03 23:10:42 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 6.138668s.
2025-11-03 23:10:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/estimate_sigma".
2025-11-03 23:10:44 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:10:44 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.052109s.
2025-11-03 23:10:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/get_wm".
2025-11-03 23:10:46 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:10:46 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.046421s.
2025-11-03 23:10:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/dwimodel".
2025-11-03 23:10:48 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-11-03 23:10:56 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 7.406005s.
2025-11-03 23:10:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7f40ffdb111de4d1676884968b65187121f8dbe2/estimate_sigma".
2025-11-03 23:10:56 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:10:56 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.083043s.
2025-11-03 23:10:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/get_wm".
2025-11-03 23:10:58 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:10:58 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.047888s.
2025-11-03 23:11:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/dwimodel".
2025-11-03 23:11:00 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-11-03 23:11:08 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 7.350123s.
2025-11-03 23:11:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/estimate_sigma".
2025-11-03 23:11:08 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:11:08 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.053626s.
2025-11-03 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/get_wm".
2025-11-03 23:11:10 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:11:10 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.045098s.
2025-11-03 23:11:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/synthstrip".
2025-11-03 23:11:12 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 23:11:45 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.10908s.
2025-11-03 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/synthstrip".
2025-11-03 23:11:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 23:12:19 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.052195s.
2025-11-03 23:12:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/synthstrip".
2025-11-03 23:12:20 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 23:12:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.022353s.
2025-11-03 23:12:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/synthstrip".
2025-11-03 23:12:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-11-03 23:13:27 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.122016s.
2025-11-03 23:13:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/cc_mask".
2025-11-03 23:13:28 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-11-03 23:13:29 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.720143s.
2025-11-03 23:13:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_fa".
2025-11-03 23:13:30 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:13:32 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.476569s.
2025-11-03 23:13:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_md".
2025-11-03 23:13:32 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:13:34 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.740197s.
2025-11-03 23:13:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/plot_heatmap".
2025-11-03 23:13:34 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-11-03 23:13:36 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 2.031418s.
2025-11-03 23:13:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/cc_mask".
2025-11-03 23:13:38 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-11-03 23:13:39 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.7252s.
2025-11-03 23:13:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_fa".
2025-11-03 23:13:40 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:13:42 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.749004s.
2025-11-03 23:13:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_md".
2025-11-03 23:13:42 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:13:44 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.742473s.
2025-11-03 23:13:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/plot_heatmap".
2025-11-03 23:13:44 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-11-03 23:13:46 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.988865s.
2025-11-03 23:13:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/cc_mask".
2025-11-03 23:13:48 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-11-03 23:13:49 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.797201s.
2025-11-03 23:13:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_fa".
2025-11-03 23:13:50 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:13:52 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.933462s.
2025-11-03 23:13:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_md".
2025-11-03 23:13:54 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:13:56 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.926276s.
2025-11-03 23:13:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/plot_heatmap".
2025-11-03 23:13:58 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-11-03 23:14:00 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 2.133601s.
2025-11-03 23:14:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/cc_mask".
2025-11-03 23:14:02 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-11-03 23:14:03 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.728808s.
2025-11-03 23:14:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_fa".
2025-11-03 23:14:04 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:14:06 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.811681s.
2025-11-03 23:14:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_md".
2025-11-03 23:14:06 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:14:08 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.786732s.
2025-11-03 23:14:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/plot_heatmap".
2025-11-03 23:14:08 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-11-03 23:14:10 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 2.068216s.
2025-11-03 23:14:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/post_n4".
2025-11-03 23:14:12 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:14:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.984632s.
2025-11-03 23:14:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/EPI2MNI".
2025-11-03 23:14:14 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 23:14:14 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:14:34 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/EPI2MNI/stderr.nipype-init).
2025-11-03 23:14:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:14:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/SharpenEPI/sub-02_ses-Y3CMH_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/SharpenEPI/sub-02_ses-Y3CMH_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/SharpenEPI/sub-02_ses-Y3CMH_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:15:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:15:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:15:30 | INFO | niworkflows | Generating visual report
2025-11-03 23:15:44 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.809037s.
2025-11-03 23:15:44 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-11-03 23:15:44 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-11-03 23:15:51 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.217985s.
2025-11-03 23:15:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/smoothness/mapflow/_smoothness0".
2025-11-03 23:15:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 23:15:53 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.31964s.
2025-11-03 23:15:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/outliers/mapflow/_outliers0".
2025-11-03 23:15:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-11-03 23:15:55 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.102067s.
2025-11-03 23:15:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/gcor/mapflow/_gcor0".
2025-11-03 23:15:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-11-03 23:15:58 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.686556s.
2025-11-03 23:15:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/dilated_mask".
2025-11-03 23:15:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-11-03 23:15:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014992s.
2025-11-03 23:16:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-11-03 23:16:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:16:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.871456s.
2025-11-03 23:16:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/PlotBrainmask".
2025-11-03 23:16:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:16:04 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.2597260000000001s.
2025-11-03 23:16:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/post_n4".
2025-11-03 23:16:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:16:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.801194s.
2025-11-03 23:16:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/EPI2MNI".
2025-11-03 23:16:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 23:16:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:16:29 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/EPI2MNI/stderr.nipype-init).
2025-11-03 23:16:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:16:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/SharpenEPI/sub-02_ses-Y3MRP_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/SharpenEPI/sub-02_ses-Y3MRP_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/SharpenEPI/sub-02_ses-Y3MRP_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:17:23 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:17:23 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:17:23 | INFO | niworkflows | Generating visual report
2025-11-03 23:17:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.458482s.
2025-11-03 23:17:38 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-11-03 23:17:38 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-11-03 23:17:44 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.163076s.
2025-11-03 23:17:44 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/smoothness/mapflow/_smoothness0".
2025-11-03 23:17:44 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 23:17:45 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.29617s.
2025-11-03 23:17:46 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/outliers/mapflow/_outliers0".
2025-11-03 23:17:46 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-11-03 23:17:47 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.98997s.
2025-11-03 23:17:48 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/gcor/mapflow/_gcor0".
2025-11-03 23:17:48 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-11-03 23:17:50 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.284042s.
2025-11-03 23:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/dilated_mask".
2025-11-03 23:17:50 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-11-03 23:17:50 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014839s.
2025-11-03 23:17:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-11-03 23:17:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:17:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.856779s.
2025-11-03 23:17:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/PlotBrainmask".
2025-11-03 23:17:54 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:17:56 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.2764440000000001s.
2025-11-03 23:17:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/post_n4".
2025-11-03 23:17:56 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:17:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.796408s.
2025-11-03 23:17:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/EPI2MNI".
2025-11-03 23:17:58 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 23:17:58 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:18:21 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/EPI2MNI/stderr.nipype-init).
2025-11-03 23:18:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:18:21 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/SharpenEPI/sub-02_ses-Y3ZHP_task-rest_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/SharpenEPI/sub-02_ses-Y3ZHP_task-rest_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/SharpenEPI/sub-02_ses-Y3ZHP_task-rest_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:19:15 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:19:15 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:19:15 | INFO | niworkflows | Generating visual report
2025-11-03 23:19:30 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.159134s.
2025-11-03 23:19:30 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-11-03 23:19:30 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-11-03 23:19:36 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.203093s.
2025-11-03 23:19:36 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/smoothness/mapflow/_smoothness0".
2025-11-03 23:19:36 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 23:19:37 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.29626s.
2025-11-03 23:19:38 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/outliers/mapflow/_outliers0".
2025-11-03 23:19:38 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-11-03 23:19:39 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.0069379999999999s.
2025-11-03 23:19:40 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/gcor/mapflow/_gcor0".
2025-11-03 23:19:40 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-11-03 23:19:42 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.284349s.
2025-11-03 23:19:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/dilated_mask".
2025-11-03 23:19:42 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-11-03 23:19:42 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015688s.
2025-11-03 23:19:44 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-11-03 23:19:44 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:19:45 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.862946s.
2025-11-03 23:19:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/PlotBrainmask".
2025-11-03 23:19:46 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:19:48 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.309428s.
2025-11-03 23:19:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/post_n4".
2025-11-03 23:19:48 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-11-03 23:19:49 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.807334s.
2025-11-03 23:19:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/EPI2MNI".
2025-11-03 23:19:50 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-11-03 23:19:50 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-11-03 23:20:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/EPI2MNI/stderr.nipype-init).
2025-11-03 23:20:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-11-03 23:20:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/SharpenEPI/sub-02_ses-Y4CMP_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/SharpenEPI/sub-02_ses-Y4CMP_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/SharpenEPI/sub-02_ses-Y4CMP_task-rest_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-11-03 23:21:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-11-03 23:21:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-11-03 23:21:08 | INFO | niworkflows | Generating visual report
2025-11-03 23:21:22 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.600747s.
2025-11-03 23:21:22 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-11-03 23:21:22 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-11-03 23:21:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.167257s.
2025-11-03 23:21:29 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/smoothness/mapflow/_smoothness0".
2025-11-03 23:21:29 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-11-03 23:21:29 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.306538s.
2025-11-03 23:21:30 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/outliers/mapflow/_outliers0".
2025-11-03 23:21:30 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-11-03 23:21:31 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.980106s.
2025-11-03 23:21:32 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/gcor/mapflow/_gcor0".
2025-11-03 23:21:32 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-11-03 23:21:34 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.3139020000000001s.
2025-11-03 23:21:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/dilated_mask".
2025-11-03 23:21:34 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-11-03 23:21:35 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.011377s.
2025-11-03 23:21:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-11-03 23:21:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-03 23:21:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.85075s.
2025-11-03 23:21:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/PlotBrainmask".
2025-11-03 23:21:38 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:21:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.253904s.
2025-11-03 23:21:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_fa".
2025-11-03 23:21:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.003996s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_md".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004102s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_hm".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003981s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_fa".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004073s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_md".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003984s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_hm".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004091s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_fa".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.003984s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_md".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003918s.
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_hm".
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:41 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003997s.
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_fa".
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004013s.
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_md".
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003953s.
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_hm".
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004043s.
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/final_masked".
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022794s.
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ResampleSegmentation".
2025-11-03 23:21:42 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:21:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.226632s.
2025-11-03 23:21:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_norm".
2025-11-03 23:21:44 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:44 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004195s.
2025-11-03 23:21:45 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/measures/mapflow/_measures0".
2025-11-03 23:21:45 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-11-03 23:21:45 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.577772s.
2025-11-03 23:21:46 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/timeseries/mapflow/_timeseries0".
2025-11-03 23:21:46 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-11-03 23:21:47 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.020439s.
2025-11-03 23:21:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/subtract_mask".
2025-11-03 23:21:48 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-11-03 23:21:49 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016483s.
2025-11-03 23:21:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-11-03 23:21:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00409s.
2025-11-03 23:21:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_bmask".
2025-11-03 23:21:51 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:51 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004204s.
2025-11-03 23:21:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/final_masked".
2025-11-03 23:21:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:21:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022648s.
2025-11-03 23:21:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ResampleSegmentation".
2025-11-03 23:21:52 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:21:54 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.129719s.
2025-11-03 23:21:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_norm".
2025-11-03 23:21:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:21:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00411s.
2025-11-03 23:21:55 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/measures/mapflow/_measures0".
2025-11-03 23:21:55 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-11-03 23:21:55 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.478086s.
2025-11-03 23:21:57 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/timeseries/mapflow/_timeseries0".
2025-11-03 23:21:57 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-11-03 23:21:57 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016599s.
2025-11-03 23:21:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/subtract_mask".
2025-11-03 23:21:58 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-11-03 23:21:59 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.022833s.
2025-11-03 23:22:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-11-03 23:22:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004261s.
2025-11-03 23:22:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_bmask".
2025-11-03 23:22:01 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:01 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004201s.
2025-11-03 23:22:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/final_masked".
2025-11-03 23:22:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:22:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022623s.
2025-11-03 23:22:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ResampleSegmentation".
2025-11-03 23:22:02 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:22:04 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.144183s.
2025-11-03 23:22:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_norm".
2025-11-03 23:22:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004137s.
2025-11-03 23:22:05 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/measures/mapflow/_measures0".
2025-11-03 23:22:05 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-11-03 23:22:05 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.504547s.
2025-11-03 23:22:06 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/timeseries/mapflow/_timeseries0".
2025-11-03 23:22:06 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-11-03 23:22:07 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.013713s.
2025-11-03 23:22:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/subtract_mask".
2025-11-03 23:22:08 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-11-03 23:22:09 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014947s.
2025-11-03 23:22:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-11-03 23:22:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004186s.
2025-11-03 23:22:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_bmask".
2025-11-03 23:22:11 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:11 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004173s.
2025-11-03 23:22:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/final_masked".
2025-11-03 23:22:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:22:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022362s.
2025-11-03 23:22:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ResampleSegmentation".
2025-11-03 23:22:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-11-03 23:22:14 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.159557s.
2025-11-03 23:22:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_norm".
2025-11-03 23:22:14 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:14 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004122s.
2025-11-03 23:22:15 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/measures/mapflow/_measures0".
2025-11-03 23:22:15 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-11-03 23:22:15 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.505153s.
2025-11-03 23:22:16 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/timeseries/mapflow/_timeseries0".
2025-11-03 23:22:16 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-11-03 23:22:17 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.013254s.
2025-11-03 23:22:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/subtract_mask".
2025-11-03 23:22:18 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-11-03 23:22:19 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013029s.
2025-11-03 23:22:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-11-03 23:22:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004244s.
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_bmask".
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004039s.
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/datasink/mapflow/_datasink0".
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000549s.
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_timeseries/mapflow/_ds_timeseries0".
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00361s.
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/parcels".
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:22:21 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017997s.
2025-11-03 23:22:22 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/datasink/mapflow/_datasink0".
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000699s.
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_timeseries/mapflow/_ds_timeseries0".
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00353s.
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/parcels".
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:22:23 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.011649s.
2025-11-03 23:22:24 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/datasink/mapflow/_datasink0".
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00065s.
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_timeseries/mapflow/_ds_timeseries0".
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003654s.
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/parcels".
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:22:25 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014613s.
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/datasink/mapflow/_datasink0".
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000587s.
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_timeseries/mapflow/_ds_timeseries0".
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003499s.
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/parcels".
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:22:27 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.012915s.
2025-11-03 23:22:29 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/BigPlot/mapflow/_BigPlot0".
2025-11-03 23:22:29 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-11-03 23:22:33 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.67515s.
2025-11-03 23:22:35 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/BigPlot/mapflow/_BigPlot0".
2025-11-03 23:22:35 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-11-03 23:22:36 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.762174s.
2025-11-03 23:22:37 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/BigPlot/mapflow/_BigPlot0".
2025-11-03 23:22:37 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-11-03 23:22:38 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.738765s.
2025-11-03 23:22:39 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/BigPlot/mapflow/_BigPlot0".
2025-11-03 23:22:39 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-11-03 23:22:40 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.895603s.
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6bc191959ffdbdc10d9c1c9f6f981fb9b9f16a73/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004135s.
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c8a110828384b39c265af3aca4c938b0ff7ceeb2/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004234s.
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a395d51a23c9d3c7a03ea174c77b1ae8d93c7575/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004296s.
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5cbd20eee364179dc7b5f5c2abbc0c180bd04665/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004058s.
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:22:43 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:22:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.546679s.
2025-11-03 23:22:57 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:22:57 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:23:08 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.712077s.
2025-11-03 23:23:09 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:23:09 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:23:20 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.617933s.
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1f00141d9e27611cdca52365a9eb4b7646d65608/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-11-03 23:23:21 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-11-03 23:23:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1f00141d9e27611cdca52365a9eb4b7646d65608/Enhance".
2025-11-03 23:23:23 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:23:24 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 1.097629s.
2025-11-03 23:23:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/1f00141d9e27611cdca52365a9eb4b7646d65608/format_tpm_names".
2025-11-03 23:23:25 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:23:27 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.3839259999999998s.
2025-11-03 23:23:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1f00141d9e27611cdca52365a9eb4b7646d65608/Grad".
2025-11-03 23:23:29 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:23:35 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 6.702716s.
2025-11-03 23:23:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1f00141d9e27611cdca52365a9eb4b7646d65608/apply_mask".
2025-11-03 23:23:37 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:23:37 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.399312s.
2025-11-03 23:23:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1f00141d9e27611cdca52365a9eb4b7646d65608/GradientThreshold".
2025-11-03 23:23:39 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:23:51 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 12.482383s.
2025-11-03 23:23:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/1f00141d9e27611cdca52365a9eb4b7646d65608/segmentation".
2025-11-03 23:23:53 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-11-03 23:26:03 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 130.176013s.
2025-11-03 23:26:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/1f00141d9e27611cdca52365a9eb4b7646d65608/ArtifactMask".
2025-11-03 23:26:05 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-11-03 23:26:10 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 5.859401s.
2025-11-03 23:26:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotHeadmask".
2025-11-03 23:26:11 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:26:14 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.2909610000000002s.
2025-11-03 23:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1f00141d9e27611cdca52365a9eb4b7646d65608/harmonize".
2025-11-03 23:26:15 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-11-03 23:26:16 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.376931s.
2025-11-03 23:26:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotSegmentation".
2025-11-03 23:26:17 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:26:20 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.666737s.
2025-11-03 23:26:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1f00141d9e27611cdca52365a9eb4b7646d65608/provenance".
2025-11-03 23:26:21 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 23:26:21 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.07137s.
2025-11-03 23:26:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1f00141d9e27611cdca52365a9eb4b7646d65608/ComputeQI2".
2025-11-03 23:26:21 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-11-03 23:26:32 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 11.363224s.
2025-11-03 23:26:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotAirmask".
2025-11-03 23:26:33 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:26:36 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.261168s.
2025-11-03 23:26:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/PlotArtmask".
2025-11-03 23:26:37 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:26:40 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.176593s.
2025-11-03 23:26:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_headmask".
2025-11-03 23:26:41 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:26:41 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004008s.
2025-11-03 23:26:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1f00141d9e27611cdca52365a9eb4b7646d65608/measures".
2025-11-03 23:26:41 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-11-03 23:26:51 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 9.864947s.
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_segm".
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003852s.
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_noisefit".
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003973s.
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_airmask".
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003793s.
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1f00141d9e27611cdca52365a9eb4b7646d65608/ds_report_artmask".
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003958s.
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1f00141d9e27611cdca52365a9eb4b7646d65608/datasink".
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000453s.
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:26:53 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:27:05 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.498053s.
2025-11-03 23:27:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:27:07 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:27:18 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.656615s.
2025-11-03 23:27:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:27:19 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:27:30 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.582661s.
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0b18a9418b28060373aead1b7951a10f77778d77/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-11-03 23:27:31 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-11-03 23:27:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0b18a9418b28060373aead1b7951a10f77778d77/Enhance".
2025-11-03 23:27:33 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:27:34 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 1.291158s.
2025-11-03 23:27:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/0b18a9418b28060373aead1b7951a10f77778d77/format_tpm_names".
2025-11-03 23:27:35 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:27:37 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.451439s.
2025-11-03 23:27:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0b18a9418b28060373aead1b7951a10f77778d77/Grad".
2025-11-03 23:27:39 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:27:47 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 8.349944s.
2025-11-03 23:27:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0b18a9418b28060373aead1b7951a10f77778d77/apply_mask".
2025-11-03 23:27:49 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:27:49 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.41291s.
2025-11-03 23:27:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0b18a9418b28060373aead1b7951a10f77778d77/GradientThreshold".
2025-11-03 23:27:51 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:28:06 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.414099s.
2025-11-03 23:28:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/0b18a9418b28060373aead1b7951a10f77778d77/segmentation".
2025-11-03 23:28:07 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-11-03 23:30:15 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 128.437379s.
2025-11-03 23:30:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/0b18a9418b28060373aead1b7951a10f77778d77/ArtifactMask".
2025-11-03 23:30:17 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-11-03 23:30:24 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.315009s.
2025-11-03 23:30:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotHeadmask".
2025-11-03 23:30:25 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:30:30 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 4.984835s.
2025-11-03 23:30:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0b18a9418b28060373aead1b7951a10f77778d77/harmonize".
2025-11-03 23:30:31 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-11-03 23:30:33 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.841662s.
2025-11-03 23:30:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotSegmentation".
2025-11-03 23:30:33 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:30:38 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 5.348826s.
2025-11-03 23:30:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0b18a9418b28060373aead1b7951a10f77778d77/provenance".
2025-11-03 23:30:39 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 23:30:39 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.07135s.
2025-11-03 23:30:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0b18a9418b28060373aead1b7951a10f77778d77/ComputeQI2".
2025-11-03 23:30:39 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-11-03 23:30:49 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.335174s.
2025-11-03 23:30:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotAirmask".
2025-11-03 23:30:51 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:30:56 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 4.963866s.
2025-11-03 23:30:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/PlotArtmask".
2025-11-03 23:30:57 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:31:01 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 4.328267s.
2025-11-03 23:31:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_headmask".
2025-11-03 23:31:03 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:31:03 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004003s.
2025-11-03 23:31:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0b18a9418b28060373aead1b7951a10f77778d77/measures".
2025-11-03 23:31:03 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-11-03 23:31:10 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=49.3768)
2025-11-03 23:31:10 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=49.3768)
2025-11-03 23:31:10 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=49.3768)
2025-11-03 23:31:28 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 24.783706s.
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_segm".
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003904s.
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_noisefit".
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004143s.
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_airmask".
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.00394s.
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0b18a9418b28060373aead1b7951a10f77778d77/ds_report_artmask".
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003826s.
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0b18a9418b28060373aead1b7951a10f77778d77/datasink".
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000481s.
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:31:29 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:31:41 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.429146s.
2025-11-03 23:31:43 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:31:43 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:31:54 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.557521s.
2025-11-03 23:31:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:31:55 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:32:06 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.498289s.
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/1b6c98d3f6920d7637695e72ec4e22abbe165696/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-11-03 23:32:07 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-11-03 23:32:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1b6c98d3f6920d7637695e72ec4e22abbe165696/Enhance".
2025-11-03 23:32:09 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:32:10 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 1.2642959999999999s.
2025-11-03 23:32:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/1b6c98d3f6920d7637695e72ec4e22abbe165696/format_tpm_names".
2025-11-03 23:32:11 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:32:13 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.421445s.
2025-11-03 23:32:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1b6c98d3f6920d7637695e72ec4e22abbe165696/Grad".
2025-11-03 23:32:15 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:32:23 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 8.333543s.
2025-11-03 23:32:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1b6c98d3f6920d7637695e72ec4e22abbe165696/apply_mask".
2025-11-03 23:32:25 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:32:25 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.438684s.
2025-11-03 23:32:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/1b6c98d3f6920d7637695e72ec4e22abbe165696/GradientThreshold".
2025-11-03 23:32:27 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:32:42 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.381143s.
2025-11-03 23:32:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/1b6c98d3f6920d7637695e72ec4e22abbe165696/segmentation".
2025-11-03 23:32:43 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-11-03 23:34:52 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 128.970509s.
2025-11-03 23:34:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/1b6c98d3f6920d7637695e72ec4e22abbe165696/ArtifactMask".
2025-11-03 23:34:53 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-11-03 23:35:00 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.313835s.
2025-11-03 23:35:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotHeadmask".
2025-11-03 23:35:01 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:35:06 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 5.009103s.
2025-11-03 23:35:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1b6c98d3f6920d7637695e72ec4e22abbe165696/harmonize".
2025-11-03 23:35:07 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-11-03 23:35:09 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.832991s.
2025-11-03 23:35:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotSegmentation".
2025-11-03 23:35:09 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:35:14 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 5.377117s.
2025-11-03 23:35:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1b6c98d3f6920d7637695e72ec4e22abbe165696/provenance".
2025-11-03 23:35:15 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 23:35:15 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.096334s.
2025-11-03 23:35:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1b6c98d3f6920d7637695e72ec4e22abbe165696/ComputeQI2".
2025-11-03 23:35:15 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-11-03 23:35:25 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.465529s.
2025-11-03 23:35:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotAirmask".
2025-11-03 23:35:27 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:35:32 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 5.001586s.
2025-11-03 23:35:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/PlotArtmask".
2025-11-03 23:35:33 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:35:37 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 4.299016s.
2025-11-03 23:35:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_headmask".
2025-11-03 23:35:39 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:35:39 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003791s.
2025-11-03 23:35:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1b6c98d3f6920d7637695e72ec4e22abbe165696/measures".
2025-11-03 23:35:39 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-11-03 23:35:46 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=52.8697)
2025-11-03 23:35:46 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=52.8697)
2025-11-03 23:35:46 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=52.8697)
2025-11-03 23:36:04 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 24.728766s.
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_segm".
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003818s.
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_noisefit".
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003926s.
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_airmask".
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003775s.
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/1b6c98d3f6920d7637695e72ec4e22abbe165696/ds_report_artmask".
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003786s.
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/1b6c98d3f6920d7637695e72ec4e22abbe165696/datasink".
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000461s.
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:36:05 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:36:17 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.410567s.
2025-11-03 23:36:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:36:19 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:36:30 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.58726s.
2025-11-03 23:36:31 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:36:31 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:36:42 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.553584s.
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-11-03 23:36:43 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-11-03 23:36:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/Enhance".
2025-11-03 23:36:45 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:36:46 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 1.289884s.
2025-11-03 23:36:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/format_tpm_names".
2025-11-03 23:36:47 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:36:49 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.452357s.
2025-11-03 23:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/Grad".
2025-11-03 23:36:51 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:36:59 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 8.305383s.
2025-11-03 23:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/apply_mask".
2025-11-03 23:37:01 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:37:01 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.410169s.
2025-11-03 23:37:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/GradientThreshold".
2025-11-03 23:37:03 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:37:18 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.439417s.
2025-11-03 23:37:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/segmentation".
2025-11-03 23:37:19 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-11-03 23:39:28 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 128.798579s.
2025-11-03 23:39:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ArtifactMask".
2025-11-03 23:39:29 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-11-03 23:39:36 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.2627749999999995s.
2025-11-03 23:39:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotHeadmask".
2025-11-03 23:39:37 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:39:42 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 4.9614519999999995s.
2025-11-03 23:39:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/harmonize".
2025-11-03 23:39:43 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-11-03 23:39:45 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.861288s.
2025-11-03 23:39:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotSegmentation".
2025-11-03 23:39:45 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:39:50 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 5.364112s.
2025-11-03 23:39:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/provenance".
2025-11-03 23:39:51 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 23:39:51 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.072842s.
2025-11-03 23:39:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ComputeQI2".
2025-11-03 23:39:51 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-11-03 23:40:03 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 11.54955s.
2025-11-03 23:40:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotAirmask".
2025-11-03 23:40:03 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:40:08 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 4.935681s.
2025-11-03 23:40:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/PlotArtmask".
2025-11-03 23:40:09 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:40:13 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 4.265013s.
2025-11-03 23:40:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_headmask".
2025-11-03 23:40:15 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:40:15 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003994s.
2025-11-03 23:40:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/measures".
2025-11-03 23:40:15 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-11-03 23:40:22 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=57.8075)
2025-11-03 23:40:22 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=57.8075)
2025-11-03 23:40:22 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=57.8075)
2025-11-03 23:40:40 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 24.772698s.
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_segm".
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003987s.
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_noisefit".
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003822s.
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_airmask".
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003831s.
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/ds_report_artmask".
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.00379s.
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9cb7fe9aa2540cba500db71bcfc98c059a37d81c/datasink".
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:40:41 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000462s.
2025-11-03 23:40:42 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:40:42 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:40:53 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.532639s.
2025-11-03 23:40:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:40:55 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:41:07 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.693687s.
2025-11-03 23:41:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:41:07 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.659305s.
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9034a5eb4256b9feba69d1763cf57a6d4e9904db/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-11-03 23:41:19 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-11-03 23:41:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9034a5eb4256b9feba69d1763cf57a6d4e9904db/Enhance".
2025-11-03 23:41:21 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:41:22 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 1.255453s.
2025-11-03 23:41:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/9034a5eb4256b9feba69d1763cf57a6d4e9904db/format_tpm_names".
2025-11-03 23:41:23 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:41:25 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.437985s.
2025-11-03 23:41:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9034a5eb4256b9feba69d1763cf57a6d4e9904db/Grad".
2025-11-03 23:41:27 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:41:35 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 8.258509s.
2025-11-03 23:41:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9034a5eb4256b9feba69d1763cf57a6d4e9904db/apply_mask".
2025-11-03 23:41:37 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:41:37 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.454411s.
2025-11-03 23:41:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9034a5eb4256b9feba69d1763cf57a6d4e9904db/GradientThreshold".
2025-11-03 23:41:39 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:41:54 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.343031s.
2025-11-03 23:41:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/9034a5eb4256b9feba69d1763cf57a6d4e9904db/segmentation".
2025-11-03 23:41:55 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-11-03 23:44:04 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 129.053566s.
2025-11-03 23:44:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ArtifactMask".
2025-11-03 23:44:05 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-11-03 23:44:12 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.411052s.
2025-11-03 23:44:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotHeadmask".
2025-11-03 23:44:13 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:44:18 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 4.956539s.
2025-11-03 23:44:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9034a5eb4256b9feba69d1763cf57a6d4e9904db/harmonize".
2025-11-03 23:44:19 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-11-03 23:44:21 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.840121s.
2025-11-03 23:44:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotSegmentation".
2025-11-03 23:44:21 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:44:26 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 5.333781s.
2025-11-03 23:44:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9034a5eb4256b9feba69d1763cf57a6d4e9904db/provenance".
2025-11-03 23:44:27 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 23:44:27 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.088646s.
2025-11-03 23:44:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ComputeQI2".
2025-11-03 23:44:27 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-11-03 23:44:38 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.488949999999999s.
2025-11-03 23:44:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotAirmask".
2025-11-03 23:44:39 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:44:44 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 4.955233s.
2025-11-03 23:44:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/PlotArtmask".
2025-11-03 23:44:45 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:44:49 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 4.269529s.
2025-11-03 23:44:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_headmask".
2025-11-03 23:44:51 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:44:51 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003936s.
2025-11-03 23:44:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9034a5eb4256b9feba69d1763cf57a6d4e9904db/measures".
2025-11-03 23:44:51 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-11-03 23:44:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=63.898)
2025-11-03 23:44:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=63.898)
2025-11-03 23:44:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=63.898)
2025-11-03 23:45:16 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 24.951865s.
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_segm".
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003865s.
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_noisefit".
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003937s.
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_airmask".
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.006021s.
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9034a5eb4256b9feba69d1763cf57a6d4e9904db/ds_report_artmask".
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:45:17 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003902s.
2025-11-03 23:45:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9034a5eb4256b9feba69d1763cf57a6d4e9904db/datasink".
2025-11-03 23:45:18 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:45:18 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000475s.
2025-11-03 23:45:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:45:18 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:45:29 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.702965s.
2025-11-03 23:45:31 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:45:31 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:45:43 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.766305s.
2025-11-03 23:45:43 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:45:43 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.732106s.
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/64db8acaa860660c55960618e0a8ccf454836a0b/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-11-03 23:45:55 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-11-03 23:45:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/64db8acaa860660c55960618e0a8ccf454836a0b/Enhance".
2025-11-03 23:45:57 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:45:58 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 1.307896s.
2025-11-03 23:45:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/64db8acaa860660c55960618e0a8ccf454836a0b/format_tpm_names".
2025-11-03 23:45:59 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:46:02 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.506218s.
2025-11-03 23:46:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/64db8acaa860660c55960618e0a8ccf454836a0b/Grad".
2025-11-03 23:46:03 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:46:11 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 8.411283s.
2025-11-03 23:46:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/64db8acaa860660c55960618e0a8ccf454836a0b/apply_mask".
2025-11-03 23:46:13 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-11-03 23:46:13 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.417355s.
2025-11-03 23:46:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/64db8acaa860660c55960618e0a8ccf454836a0b/GradientThreshold".
2025-11-03 23:46:15 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-11-03 23:46:31 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.777257s.
2025-11-03 23:46:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/64db8acaa860660c55960618e0a8ccf454836a0b/segmentation".
2025-11-03 23:46:31 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-11-03 23:48:41 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 129.514792s.
2025-11-03 23:48:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/64db8acaa860660c55960618e0a8ccf454836a0b/ArtifactMask".
2025-11-03 23:48:41 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-11-03 23:48:48 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.180559s.
2025-11-03 23:48:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotHeadmask".
2025-11-03 23:48:49 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:48:54 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 4.978171s.
2025-11-03 23:48:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/64db8acaa860660c55960618e0a8ccf454836a0b/harmonize".
2025-11-03 23:48:55 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-11-03 23:48:57 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.8660679999999998s.
2025-11-03 23:48:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotSegmentation".
2025-11-03 23:48:57 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:49:02 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 5.363524s.
2025-11-03 23:49:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/64db8acaa860660c55960618e0a8ccf454836a0b/provenance".
2025-11-03 23:49:03 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-11-03 23:49:03 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.073663s.
2025-11-03 23:49:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/64db8acaa860660c55960618e0a8ccf454836a0b/ComputeQI2".
2025-11-03 23:49:03 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-11-03 23:49:15 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 11.685392s.
2025-11-03 23:49:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotAirmask".
2025-11-03 23:49:15 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:49:20 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 4.929281s.
2025-11-03 23:49:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/PlotArtmask".
2025-11-03 23:49:21 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-11-03 23:49:25 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 4.315139s.
2025-11-03 23:49:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_headmask".
2025-11-03 23:49:27 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:49:27 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.00388s.
2025-11-03 23:49:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/64db8acaa860660c55960618e0a8ccf454836a0b/measures".
2025-11-03 23:49:27 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-11-03 23:49:35 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=52.9946)
2025-11-03 23:49:35 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=52.9946)
2025-11-03 23:49:35 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=52.9946)
2025-11-03 23:49:52 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 24.812862s.
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_segm".
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003815s.
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_noisefit".
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003812s.
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_airmask".
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003883s.
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/64db8acaa860660c55960618e0a8ccf454836a0b/ds_report_artmask".
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-11-03 23:49:53 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003896s.
2025-11-03 23:49:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/64db8acaa860660c55960618e0a8ccf454836a0b/datasink".
2025-11-03 23:49:54 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-03 23:49:54 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00048s.
2025-11-03 23:49:54 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/averages/mapflow/_averages0".
2025-11-03 23:49:54 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-03 23:49:55 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.898411s.
2025-11-03 23:49:55 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/averages/mapflow/_averages1".
2025-11-03 23:49:55 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-03 23:49:56 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.9065s.
2025-11-03 23:49:57 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/averages/mapflow/_averages0".
2025-11-03 23:49:57 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-11-03 23:49:57 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-11-03 23:49:57 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/averages/mapflow/_averages1".
2025-11-03 23:49:57 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-11-03 23:49:57 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-11-03 23:49:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/1ebad27f1e7597fb01897040ffb510763dd05b7d/motion_correct".
2025-11-03 23:49:59 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-03 23:55:30 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 330.672512s.
2025-11-03 23:55:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/1ebad27f1e7597fb01897040ffb510763dd05b7d/ComputeFD".
2025-11-03 23:55:31 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-03 23:55:31 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001126s.
2025-11-03 23:55:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/1ebad27f1e7597fb01897040ffb510763dd05b7d/bvec_rot".
2025-11-03 23:55:33 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-11-03 23:55:33 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.027631s.
2025-11-03 23:55:35 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/stddev/mapflow/_stddev0".
2025-11-03 23:55:35 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-03 23:55:36 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 1.111382s.
2025-11-03 23:55:37 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/stddev/mapflow/_stddev1".
2025-11-03 23:55:37 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-03 23:55:38 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 1.109145s.
2025-11-03 23:55:39 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/stddev/mapflow/_stddev0".
2025-11-03 23:55:39 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-11-03 23:55:39 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-11-03 23:55:39 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/stddev/mapflow/_stddev1".
2025-11-03 23:55:39 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-11-03 23:55:39 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-11-03 23:55:41 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/averages/mapflow/_averages0".
2025-11-03 23:55:41 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-03 23:55:42 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 1.005315s.
2025-11-03 23:55:43 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/averages/mapflow/_averages1".
2025-11-03 23:55:43 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-03 23:55:44 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.990216s.
2025-11-03 23:55:45 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/averages/mapflow/_averages0".
2025-11-03 23:55:45 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-11-03 23:55:45 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-11-03 23:55:45 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/averages/mapflow/_averages1".
2025-11-03 23:55:45 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-11-03 23:55:45 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-11-03 23:55:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/motion_correct".
2025-11-03 23:55:47 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-04 00:01:10 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 323.004791s.
2025-11-04 00:01:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ComputeFD".
2025-11-04 00:01:11 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-04 00:01:11 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001093s.
2025-11-04 00:01:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/bvec_rot".
2025-11-04 00:01:13 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-11-04 00:01:13 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.025491s.
2025-11-04 00:01:15 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/stddev/mapflow/_stddev0".
2025-11-04 00:01:15 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:01:17 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 1.201883s.
2025-11-04 00:01:17 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/stddev/mapflow/_stddev1".
2025-11-04 00:01:17 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 1.203161s.
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/stddev/mapflow/_stddev0".
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/stddev/mapflow/_stddev1".
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-11-04 00:01:19 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-11-04 00:01:21 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/averages/mapflow/_averages0".
2025-11-04 00:01:21 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:01:22 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 1.024529s.
2025-11-04 00:01:23 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/averages/mapflow/_averages1".
2025-11-04 00:01:23 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:01:24 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 1.01677s.
2025-11-04 00:01:25 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/averages/mapflow/_averages0".
2025-11-04 00:01:25 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-11-04 00:01:25 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-11-04 00:01:25 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/averages/mapflow/_averages1".
2025-11-04 00:01:25 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-11-04 00:01:25 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-11-04 00:01:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/7f40ffdb111de4d1676884968b65187121f8dbe2/motion_correct".
2025-11-04 00:01:27 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-04 00:07:02 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 334.392317s.
2025-11-04 00:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/7f40ffdb111de4d1676884968b65187121f8dbe2/ComputeFD".
2025-11-04 00:07:04 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-04 00:07:04 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001095s.
2025-11-04 00:07:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/7f40ffdb111de4d1676884968b65187121f8dbe2/bvec_rot".
2025-11-04 00:07:06 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-11-04 00:07:06 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.027976s.
2025-11-04 00:07:08 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/stddev/mapflow/_stddev0".
2025-11-04 00:07:08 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:07:09 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 1.261036s.
2025-11-04 00:07:10 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/stddev/mapflow/_stddev1".
2025-11-04 00:07:10 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:07:11 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 1.258143s.
2025-11-04 00:07:12 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/stddev/mapflow/_stddev0".
2025-11-04 00:07:12 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-11-04 00:07:12 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-11-04 00:07:12 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/stddev/mapflow/_stddev1".
2025-11-04 00:07:12 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-11-04 00:07:12 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-11-04 00:07:14 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/averages/mapflow/_averages0".
2025-11-04 00:07:14 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:07:15 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.930426s.
2025-11-04 00:07:16 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/averages/mapflow/_averages1".
2025-11-04 00:07:16 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:07:17 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.924877s.
2025-11-04 00:07:18 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/averages/mapflow/_averages0".
2025-11-04 00:07:18 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-11-04 00:07:18 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-11-04 00:07:18 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/averages/mapflow/_averages1".
2025-11-04 00:07:18 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-11-04 00:07:18 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-11-04 00:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/motion_correct".
2025-11-04 00:07:20 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-11-04 00:12:41 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 321.497112s.
2025-11-04 00:12:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ComputeFD".
2025-11-04 00:12:42 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-11-04 00:12:42 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.0011s.
2025-11-04 00:12:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/bvec_rot".
2025-11-04 00:12:44 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-11-04 00:12:44 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.026608s.
2025-11-04 00:12:46 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/stddev/mapflow/_stddev0".
2025-11-04 00:12:46 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:12:47 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 1.138891s.
2025-11-04 00:12:48 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/stddev/mapflow/_stddev1".
2025-11-04 00:12:48 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-11-04 00:12:49 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 1.13843s.
2025-11-04 00:12:50 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/stddev/mapflow/_stddev0".
2025-11-04 00:12:50 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-11-04 00:12:50 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-11-04 00:12:50 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/stddev/mapflow/_stddev1".
2025-11-04 00:12:50 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-11-04 00:12:50 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-11-04 00:12:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:12:52 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:12:53 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.447168s.
2025-11-04 00:12:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:12:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:12:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.513478s.
2025-11-04 00:12:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:12:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-11-04 00:12:56 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-11-04 00:12:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:12:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-11-04 00:12:56 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-11-04 00:12:58 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:12:58 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:13:00 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.732858s.
2025-11-04 00:13:00 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:13:00 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:13:08 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 8.087581s.
2025-11-04 00:13:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:13:10 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-11-04 00:13:10 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-11-04 00:13:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:13:10 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-11-04 00:13:10 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-11-04 00:13:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1ebad27f1e7597fb01897040ffb510763dd05b7d/measures".
2025-11-04 00:13:12 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-11-04 00:13:52 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 40.503996s.
2025-11-04 00:13:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1ebad27f1e7597fb01897040ffb510763dd05b7d/datasink".
2025-11-04 00:13:54 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-04 00:13:54 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000453s.
2025-11-04 00:13:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:13:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:13:54 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/stddev/mapflow/_stddev0/sub-02_ses-Y3CMH_run-1_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/averages/mapflow/_averages0/sub-02_ses-Y3CMH_run-1_dwi_nodriftfull_mean.nii.gz) images
2025-11-04 00:13:54 | INFO | nipype.interface | Generating visual report
2025-11-04 00:14:10 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.516503s.
2025-11-04 00:14:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:14:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:14:12 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/stddev/mapflow/_stddev1/sub-02_ses-Y3CMH_run-1_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/1ebad27f1e7597fb01897040ffb510763dd05b7d/averages/mapflow/_averages1/sub-02_ses-Y3CMH_run-1_dwi_nodriftfull_mean.nii.gz) images
2025-11-04 00:14:12 | INFO | nipype.interface | Generating visual report
2025-11-04 00:14:28 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 16.389099s.
2025-11-04 00:14:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:14:30 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-11-04 00:14:30 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-11-04 00:14:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:14:30 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-11-04 00:14:30 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-11-04 00:14:32 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:14:32 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:14:33 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.575156s.
2025-11-04 00:14:34 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:14:34 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.772339s.
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-11-04 00:14:36 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-11-04 00:14:38 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:14:38 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:14:40 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 2.023916s.
2025-11-04 00:14:42 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:14:42 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:14:51 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 8.708734s.
2025-11-04 00:14:52 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:14:52 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-11-04 00:14:52 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-11-04 00:14:52 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:14:52 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-11-04 00:14:52 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-11-04 00:14:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/measures".
2025-11-04 00:14:54 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-11-04 00:15:34 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 40.410758s.
2025-11-04 00:15:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/datasink".
2025-11-04 00:15:36 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-04 00:15:36 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00049s.
2025-11-04 00:15:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:15:36 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:15:36 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/stddev/mapflow/_stddev0/sub-02_ses-Y3MRP_run-1_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/averages/mapflow/_averages0/sub-02_ses-Y3MRP_run-1_dwi_valid_nodriftfull_mean.nii.gz) images
2025-11-04 00:15:36 | INFO | nipype.interface | Generating visual report
2025-11-04 00:15:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.169967s.
2025-11-04 00:15:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:15:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:15:54 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/stddev/mapflow/_stddev1/sub-02_ses-Y3MRP_run-1_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/averages/mapflow/_averages1/sub-02_ses-Y3MRP_run-1_dwi_valid_nodriftfull_mean.nii.gz) images
2025-11-04 00:15:54 | INFO | nipype.interface | Generating visual report
2025-11-04 00:16:10 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 15.985728s.
2025-11-04 00:16:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:16:12 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-11-04 00:16:12 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-11-04 00:16:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:16:12 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-11-04 00:16:12 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-11-04 00:16:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:16:14 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:16:16 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.705854s.
2025-11-04 00:16:16 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:16:16 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:16:18 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.958863s.
2025-11-04 00:16:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:16:20 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-11-04 00:16:20 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-11-04 00:16:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:16:20 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-11-04 00:16:20 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-11-04 00:16:22 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:16:22 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:16:24 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 2.289773s.
2025-11-04 00:16:26 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:16:26 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 9.866379s.
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-11-04 00:16:36 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-11-04 00:16:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7f40ffdb111de4d1676884968b65187121f8dbe2/measures".
2025-11-04 00:16:38 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-11-04 00:17:19 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 41.300399s.
2025-11-04 00:17:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7f40ffdb111de4d1676884968b65187121f8dbe2/datasink".
2025-11-04 00:17:20 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-04 00:17:20 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000531s.
2025-11-04 00:17:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:17:20 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:17:20 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/stddev/mapflow/_stddev0/sub-02_ses-Y3ZHP_run-1_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/averages/mapflow/_averages0/sub-02_ses-Y3ZHP_run-1_dwi_nodriftfull_mean.nii.gz) images
2025-11-04 00:17:20 | INFO | nipype.interface | Generating visual report
2025-11-04 00:17:37 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.81042s.
2025-11-04 00:17:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:17:38 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:17:38 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/stddev/mapflow/_stddev1/sub-02_ses-Y3ZHP_run-1_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/7f40ffdb111de4d1676884968b65187121f8dbe2/averages/mapflow/_averages1/sub-02_ses-Y3ZHP_run-1_dwi_nodriftfull_mean.nii.gz) images
2025-11-04 00:17:38 | INFO | nipype.interface | Generating visual report
2025-11-04 00:17:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 16.653428s.
2025-11-04 00:17:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:17:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-11-04 00:17:56 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-11-04 00:17:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:17:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-11-04 00:17:56 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-11-04 00:17:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:17:58 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:17:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.494448s.
2025-11-04 00:18:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:18:00 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.736475s.
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_noise/mapflow/_mosaic_noise0".
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_noise/mapflow/_mosaic_noise1".
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-11-04 00:18:02 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-11-04 00:18:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:18:04 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:18:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.979807s.
2025-11-04 00:18:08 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:18:08 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-11-04 00:18:17 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 8.922936s.
2025-11-04 00:18:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-11-04 00:18:18 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-11-04 00:18:18 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-11-04 00:18:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-11-04 00:18:18 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-11-04 00:18:18 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-11-04 00:18:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/measures".
2025-11-04 00:18:20 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-11-04 00:19:01 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 40.705533s.
2025-11-04 00:19:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/datasink".
2025-11-04 00:19:02 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-11-04 00:19:02 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.0005s.
2025-11-04 00:19:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:19:02 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:19:02 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/stddev/mapflow/_stddev0/sub-02_ses-Y4CMP_run-1_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/averages/mapflow/_averages0/sub-02_ses-Y4CMP_run-1_dwi_valid_nodriftfull_mean.nii.gz) images
2025-11-04 00:19:02 | INFO | nipype.interface | Generating visual report
2025-11-04 00:19:18 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.388068s.
2025-11-04 00:19:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:19:20 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-11-04 00:19:20 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/stddev/mapflow/_stddev1/sub-02_ses-Y4CMP_run-1_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/averages/mapflow/_averages1/sub-02_ses-Y4CMP_run-1_dwi_valid_nodriftfull_mean.nii.gz) images
2025-11-04 00:19:20 | INFO | nipype.interface | Generating visual report
2025-11-04 00:19:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 16.281061s.
2025-11-04 00:19:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_snr/mapflow/_mosaic_snr0".
2025-11-04 00:19:38 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-11-04 00:19:38 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-11-04 00:19:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/mosaic_snr/mapflow/_mosaic_snr1".
2025-11-04 00:19:38 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-11-04 00:19:38 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004049s.
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004079s.
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004079s.
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004052s.
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004099s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004107s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004036s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004062s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004125s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004052s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004176s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004078s.
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004062s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004157s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003822s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003641s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00383s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1ebad27f1e7597fb01897040ffb510763dd05b7d/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003651s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003961s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003549s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00386s.
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/15a6fdd320c4c0ab4bc46f0bd85cb1514944c0f9/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00362s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003938s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003591s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003832s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7f40ffdb111de4d1676884968b65187121f8dbe2/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00356s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_noise/mapflow/_ds_report_noise0".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003837s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_noise/mapflow/_ds_report_noise1".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003508s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004091s.
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00413s.
2025-11-04 00:19:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_snr/mapflow/_ds_report_snr0".
2025-11-04 00:19:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003905s.
2025-11-04 00:19:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8cc99bbadb6e6a3db50a6581d6dadc006372dfe2/ds_report_snr/mapflow/_ds_report_snr1".
2025-11-04 00:19:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-11-04 00:19:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003518s.
2025-11-04 00:19:46 | INFO | nipype.workflow | Generating reports...
2025-11-04 00:19:49 | INFO | nipype.workflow | Report generation finished (14 reports).
2025-11-04 00:19:49 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 09min 58s per subject.
2025-11-04 00:19:49 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 02h 19min 40s).
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