Felix Hoffstaedter
11f38daf8d
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . group --no-datalad-get --notrack --verbose --work-dir /tmp",
"dsid": "da0c85a0-2b92-4a82-8e80-1dcfc88fc18a",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"."
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
52 lines
3.8 KiB
(Stored with Git Annex)
Text
52 lines
3.8 KiB
(Stored with Git Annex)
Text
------------------------------------------------------------------
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Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
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----------------------------------------------------------------
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NOTICE
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Copyright © The NiPreps Developers.
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This product includes software developed by
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the NiPreps Community (https://nipreps.org/).
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Portions of this software were developed at the Department of
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Psychology at Stanford University, Stanford, CA, US.
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This software contains code ultimately derived from the
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PCP Quality Assessment Protocol (QAP;
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http://preprocessed-connectomes-project.org/quality-assessment-protocol)
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by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
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This software is also distributed as a Docker container image.
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The bootstrapping file for the image ("Dockerfile") is licensed
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under the MIT License.
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----------------------------------------------------------------
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* BIDS dataset path: /var/lib/condor/execute/dir_3129851/ds/sourcedata/raw.
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* Output folder: ..
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* Analysis levels: ['group'].
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------------------------------------------------------------------
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2025-11-04 04:07:10 |[33;20m IMPORTANT [0m|[33;20m mriqc [0m|[33;20m Extracting metadata and entities for 48 input runs of modality 't1w'...[0m
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2025-11-04 04:07:11 |[33;20m IMPORTANT [0m|[33;20m mriqc [0m|[33;20m File size ('t1w'): 0.02|0.01 GB [maximum|average].[0m
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2025-11-04 04:07:11 |[33;20m IMPORTANT [0m|[33;20m mriqc [0m|[33;20m Extracting metadata and entities for 30 input runs of modality 'bold'...[0m
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2025-11-04 04:07:12 |[33;20m IMPORTANT [0m|[33;20m mriqc [0m|[33;20m File size ('bold'): 0.04|0.04 GB [maximum|average].[0m
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2025-11-04 04:07:12 |[33;20m IMPORTANT [0m|[33;20m mriqc [0m|[33;20m Extracting metadata and entities for 30 input runs of modality 'dwi'...[0m
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2025-11-04 04:07:13 |[33;20m IMPORTANT [0m|[33;20m mriqc [0m|[33;20m File size ('dwi'): 0.08|0.07 GB [maximum|average].[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m MRIQC config file: /tmp/config-20251104-040708_734263b7-ba3c-4cf7-9504-5ef5a312dd4e.toml.[0m
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------------------------------------------------------------------
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Generating group reports
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------------------------------------------------------------------
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Generated summary TSV table for T1w data: /var/lib/condor/execute/dir_3129851/ds/group_T1w.tsv[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Group-T1w report generated: /var/lib/condor/execute/dir_3129851/ds/group_T1w.html[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Generated summary TSV table for bold data: /var/lib/condor/execute/dir_3129851/ds/group_bold.tsv[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Group-bold report generated: /var/lib/condor/execute/dir_3129851/ds/group_bold.html[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Generated summary TSV table for dwi data: /var/lib/condor/execute/dir_3129851/ds/group_dwi.tsv[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Group-dwi report generated: /var/lib/condor/execute/dir_3129851/ds/group_dwi.html[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Group level finished successfully.[0m
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2025-11-04 04:07:13 |[34;20m INFO [0m|[34;20m mriqc [0m|[34;20m Generating BIDS derivatives metadata.[0m
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----------------------------------------------------------------
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MRIQC completed (elapsed time 00h 00min 05s).
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----------------------------------------------------------------
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