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ds000002-mriqc/logs/duct/sub-13_2025.09.17T08.54.55-2159557stdout
Felix Hoffstaedter 58f50d18aa [DATALAD RUNCMD] Compute MRIQC for sub-13 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-13 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-13",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:39:06 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137070/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:54:58 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:54:58 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:54:58 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:54:58 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-09-17 06:54:58 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065456_35911a4e-e3f7-4a73-8391-b2507b42b327.toml.
2025-09-17 06:55:03 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:55:04 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:55:04 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:55:05 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:55:09 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:55:14 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:55:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:55:14 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:55:15 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.254664s.
2025-09-17 06:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/pick_echo".
2025-09-17 06:55:16 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:16 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000146s.
2025-09-17 06:55:18 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/provenance/mapflow/_provenance0".
2025-09-17 06:55:18 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:18 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046867s.
2025-09-17 06:55:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/pick_echo".
2025-09-17 06:55:18 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:18 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000104s.
2025-09-17 06:55:20 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/provenance/mapflow/_provenance0".
2025-09-17 06:55:20 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:20 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04884s.
2025-09-17 06:55:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/349f99c25831cf23d3f8278116d68270a5fd9450/pick_echo".
2025-09-17 06:55:20 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:20 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:55:22 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/provenance/mapflow/_provenance0".
2025-09-17 06:55:22 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:22 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.076647s.
2025-09-17 06:55:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/pick_echo".
2025-09-17 06:55:22 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:22 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-09-17 06:55:24 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/provenance/mapflow/_provenance0".
2025-09-17 06:55:24 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:24 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.061569s.
2025-09-17 06:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/ba2a777f69d0174a12d147c95a5855ace921a3fc/pick_echo".
2025-09-17 06:55:24 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:24 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000105s.
2025-09-17 06:55:26 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/provenance/mapflow/_provenance0".
2025-09-17 06:55:26 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:26 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.048227s.
2025-09-17 06:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/pick_echo".
2025-09-17 06:55:26 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:26 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:55:28 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/provenance/mapflow/_provenance0".
2025-09-17 06:55:28 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:28 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.047855s.
2025-09-17 06:55:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:55:28 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:55:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.991736s.
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:55:39 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.59552s.
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:55:45 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.644382s.
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/non_steady_state_detector".
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.181165s.
2025-09-17 06:55:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/non_steady_state_detector".
2025-09-17 06:55:48 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:55:48 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.177936s.
2025-09-17 06:55:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/349f99c25831cf23d3f8278116d68270a5fd9450/non_steady_state_detector".
2025-09-17 06:55:50 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:55:50 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153492s.
2025-09-17 06:55:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/non_steady_state_detector".
2025-09-17 06:55:52 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:55:52 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15502s.
2025-09-17 06:55:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/ba2a777f69d0174a12d147c95a5855ace921a3fc/non_steady_state_detector".
2025-09-17 06:55:54 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:55:54 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.156487s.
2025-09-17 06:55:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/non_steady_state_detector".
2025-09-17 06:55:56 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:55:56 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.155347s.
2025-09-17 06:55:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:55:58 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 61.303264s.
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008837s.
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.233604s.
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.232319s.
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/349f99c25831cf23d3f8278116d68270a5fd9450/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.351551s.
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:08 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.5884779999999998s.
2025-09-17 06:57:08 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/ba2a777f69d0174a12d147c95a5855ace921a3fc/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:08 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:10 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.242885s.
2025-09-17 06:57:10 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:10 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:12 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.2276880000000001s.
2025-09-17 06:57:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:57:12 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.143596s.
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/estimate_hm".
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:00:08 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 127.537727s.
2025-09-17 07:00:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:00:08 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:00:10 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.406241s.
2025-09-17 07:00:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/estimate_hm".
2025-09-17 07:00:10 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:02:12 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.75982s.
2025-09-17 07:02:12 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:02:12 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:02:14 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.265599s.
2025-09-17 07:02:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/349f99c25831cf23d3f8278116d68270a5fd9450/estimate_hm".
2025-09-17 07:02:14 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:04:52 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 158.039098s.
2025-09-17 07:04:55 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:04:55 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:04:56 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.337454s.
2025-09-17 07:04:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/estimate_hm".
2025-09-17 07:04:57 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:07:35 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 158.528046s.
2025-09-17 07:07:37 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:07:37 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:07:38 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.30728s.
2025-09-17 07:07:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ba2a777f69d0174a12d147c95a5855ace921a3fc/estimate_hm".
2025-09-17 07:07:39 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:39 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 120.780619s.
2025-09-17 07:09:41 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:41 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:42 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.25424s.
2025-09-17 07:09:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/estimate_hm".
2025-09-17 07:09:43 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:39 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 116.745327s.
2025-09-17 07:11:41 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:41 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:42 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.293359s.
2025-09-17 07:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:11:43 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:11:58 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 15.483079s.
2025-09-17 07:11:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:11:59 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:12:02 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.839714s.
2025-09-17 07:12:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:12:03 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:12:07 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.981776s.
2025-09-17 07:12:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:12:09 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:12:11 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.59212s.
2025-09-17 07:12:13 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:13 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:21 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.614226s.
2025-09-17 07:12:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ComputeFD".
2025-09-17 07:12:23 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:23 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002481s.
2025-09-17 07:12:25 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:25 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:25 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.43418s.
2025-09-17 07:12:27 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:27 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:35 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.588737s.
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ComputeFD".
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002386s.
2025-09-17 07:12:39 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:39 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:39 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.420571s.
2025-09-17 07:12:41 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/349f99c25831cf23d3f8278116d68270a5fd9450/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:41 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:52 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.107968s.
2025-09-17 07:12:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/349f99c25831cf23d3f8278116d68270a5fd9450/ComputeFD".
2025-09-17 07:12:53 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:53 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002952s.
2025-09-17 07:12:55 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:55 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:55 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.501645s.
2025-09-17 07:12:57 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:57 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:08 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.180483s.
2025-09-17 07:13:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ComputeFD".
2025-09-17 07:13:09 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:09 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00419s.
2025-09-17 07:13:11 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:11 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:11 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.504925s.
2025-09-17 07:13:13 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ba2a777f69d0174a12d147c95a5855ace921a3fc/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:13 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:21 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.561993s.
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ba2a777f69d0174a12d147c95a5855ace921a3fc/ComputeFD".
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002371s.
2025-09-17 07:13:25 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:25 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:25 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.414197s.
2025-09-17 07:13:27 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:27 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.432904s.
2025-09-17 07:13:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ComputeFD".
2025-09-17 07:13:37 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:37 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002419s.
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.407069s.
2025-09-17 07:13:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:13:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:13:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.252526s.
2025-09-17 07:13:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:13:43 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:13:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:14:45 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:14:45 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:14:59 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:15:00 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:15:00 | INFO | niworkflows | Generating visual report
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 94.600919s.
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004713s.
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004415s.
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/mean/mapflow/_mean0".
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:20 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.630274s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5a684179048ccf4bf5b37dbb318250d4fb331b1c/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.505739s.
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/quality/mapflow/_quality0".
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:24 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.297565s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/mean/mapflow/_mean0".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:26 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.604902s.
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.47927s.
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/quality/mapflow/_quality0".
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:30 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.300459s.
2025-09-17 07:15:31 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/349f99c25831cf23d3f8278116d68270a5fd9450/mean/mapflow/_mean0".
2025-09-17 07:15:31 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:32 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.714766s.
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/349f99c25831cf23d3f8278116d68270a5fd9450/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.559451s.
2025-09-17 07:15:35 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/quality/mapflow/_quality0".
2025-09-17 07:15:35 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:37 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.679675s.
2025-09-17 07:15:37 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/mean/mapflow/_mean0".
2025-09-17 07:15:37 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:38 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.71137s.
2025-09-17 07:15:39 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:39 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.585405s.
2025-09-17 07:15:41 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/quality/mapflow/_quality0".
2025-09-17 07:15:41 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.653388s.
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/ba2a777f69d0174a12d147c95a5855ace921a3fc/mean/mapflow/_mean0".
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:44 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.604478s.
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/ba2a777f69d0174a12d147c95a5855ace921a3fc/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.489509s.
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/quality/mapflow/_quality0".
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:48 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.320478s.
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/mean/mapflow/_mean0".
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:50 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.616087s.
2025-09-17 07:15:51 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b5384dd20733cf7aa93d94166c00db0035d8b6b8/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:51 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:51 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.451319s.
2025-09-17 07:15:53 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/quality/mapflow/_quality0".
2025-09-17 07:15:53 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:54 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.267036s.
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004727s.
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/pre_clip".
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.238764s.
2025-09-17 07:15:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/SharpenEPI".
2025-09-17 07:15:57 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5717539999999999s.
2025-09-17 07:15:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:15:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.659255s.
2025-09-17 07:16:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.888714s.
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:04 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.905097s.
2025-09-17 07:16:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/pre_clip".
2025-09-17 07:16:05 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:05 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.241148s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/SharpenEPI".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:09 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.661786s.
2025-09-17 07:16:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.681706s.
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.866262s.
2025-09-17 07:16:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.908873s.
2025-09-17 07:16:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/pre_clip".
2025-09-17 07:16:15 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.247613s.
2025-09-17 07:16:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/SharpenEPI".
2025-09-17 07:16:17 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:19 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6740680000000001s.
2025-09-17 07:16:19 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:19 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.685338s.
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.9556s.
2025-09-17 07:16:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.910749s.
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/pre_clip".
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.261085s.
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/SharpenEPI".
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:29 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.698994s.
2025-09-17 07:16:29 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:29 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.682734s.
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.912915s.
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.940084s.
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/pre_clip".
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.291402s.
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/SharpenEPI".
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.72486s.
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.699192s.
2025-09-17 07:16:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.84399s.
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.871574s.
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/pre_clip".
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.261799s.
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/SharpenEPI".
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.74371s.
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.685848s.
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.937191s.
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.935845s.
2025-09-17 07:16:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/pre_n4".
2025-09-17 07:16:55 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.636293s.
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005247s.
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005112s.
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004857s.
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/pre_n4".
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5477159999999999s.
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005157s.
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004964s.
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004906s.
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/pre_n4".
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5367s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005114s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004836s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00472s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/pre_n4".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.552063s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004838s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00476s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004899s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/pre_n4".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.573896s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004967s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004702s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00459s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/pre_n4".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5610249999999999s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005063s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004771s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004771s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/synthstrip".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.879486s.
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/synthstrip".
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:40 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.730603s.
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/synthstrip".
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 42.234568s.
2025-09-17 07:19:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/synthstrip".
2025-09-17 07:19:25 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.720302s.
2025-09-17 07:20:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/synthstrip".
2025-09-17 07:20:09 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.394874s.
2025-09-17 07:20:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/synthstrip".
2025-09-17 07:20:55 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:40 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.485171s.
2025-09-17 07:21:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/post_n4".
2025-09-17 07:21:41 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:21:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.92755s.
2025-09-17 07:21:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/EPI2MNI".
2025-09-17 07:21:43 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:21:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:22:14 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/EPI2MNI/stderr.nipype-init).
2025-09-17 07:22:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:22:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/SharpenEPI/sub-13_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/SharpenEPI/sub-13_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/SharpenEPI/sub-13_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:23:26 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:23:26 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:23:26 | INFO | niworkflows | Generating visual report
2025-09-17 07:23:43 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 119.99031s.
2025-09-17 07:23:45 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:23:45 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:23:50 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.802347s.
2025-09-17 07:23:51 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/smoothness/mapflow/_smoothness0".
2025-09-17 07:23:51 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:23:52 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.268885s.
2025-09-17 07:23:53 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/outliers/mapflow/_outliers0".
2025-09-17 07:23:53 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:23:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.807531s.
2025-09-17 07:23:55 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/gcor/mapflow/_gcor0".
2025-09-17 07:23:55 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:23:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.234248s.
2025-09-17 07:23:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/dilated_mask".
2025-09-17 07:23:57 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:23:57 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016016s.
2025-09-17 07:23:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:23:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:24:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.694549s.
2025-09-17 07:24:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/PlotBrainmask".
2025-09-17 07:24:01 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:24:03 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.3921649999999999s.
2025-09-17 07:24:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/post_n4".
2025-09-17 07:24:03 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:24:04 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.795821s.
2025-09-17 07:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/EPI2MNI".
2025-09-17 07:24:05 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:24:05 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:24:32 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:24:32 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/SharpenEPI/sub-13_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/SharpenEPI/sub-13_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/SharpenEPI/sub-13_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:25:42 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:25:42 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:25:42 | INFO | niworkflows | Generating visual report
2025-09-17 07:25:58 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 113.169318s.
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:26:04 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.643357s.
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/smoothness/mapflow/_smoothness0".
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:26:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.256684s.
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/outliers/mapflow/_outliers0".
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:26:08 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.808392s.
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/gcor/mapflow/_gcor0".
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:26:10 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.0724339999999999s.
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/dilated_mask".
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019483s.
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:26:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.663561s.
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/PlotBrainmask".
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.35374s.
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/post_n4".
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:26:18 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.792705s.
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/EPI2MNI".
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:26:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:26:47 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:26:47 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/SharpenEPI/sub-13_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/SharpenEPI/sub-13_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/SharpenEPI/sub-13_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:27:59 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:27:59 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:27:59 | INFO | niworkflows | Generating visual report
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 116.951051s.
2025-09-17 07:28:17 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:28:17 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:28:22 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.978786s.
2025-09-17 07:28:23 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/smoothness/mapflow/_smoothness0".
2025-09-17 07:28:23 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:28:24 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.258871s.
2025-09-17 07:28:25 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/outliers/mapflow/_outliers0".
2025-09-17 07:28:25 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:28:26 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.936344s.
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/gcor/mapflow/_gcor0".
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.329464s.
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/dilated_mask".
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018553s.
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:28:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.67141s.
2025-09-17 07:28:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/PlotBrainmask".
2025-09-17 07:28:33 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:35 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.189459s.
2025-09-17 07:28:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/post_n4".
2025-09-17 07:28:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:28:36 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.771079s.
2025-09-17 07:28:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/EPI2MNI".
2025-09-17 07:28:37 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:28:37 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:29:06 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:29:06 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/SharpenEPI/sub-13_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/SharpenEPI/sub-13_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/SharpenEPI/sub-13_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:30:13 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:30:13 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:30:13 | INFO | niworkflows | Generating visual report
2025-09-17 07:30:30 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.573709s.
2025-09-17 07:30:31 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:30:31 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:30:36 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.917339s.
2025-09-17 07:30:37 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/smoothness/mapflow/_smoothness0".
2025-09-17 07:30:37 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:30:38 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.249422s.
2025-09-17 07:30:39 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/outliers/mapflow/_outliers0".
2025-09-17 07:30:39 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:30:40 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.917058s.
2025-09-17 07:30:41 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/gcor/mapflow/_gcor0".
2025-09-17 07:30:41 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:30:43 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.26301s.
2025-09-17 07:30:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/dilated_mask".
2025-09-17 07:30:43 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:30:43 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017793s.
2025-09-17 07:30:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:30:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:30:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.675835s.
2025-09-17 07:30:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/PlotBrainmask".
2025-09-17 07:30:47 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:30:49 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.245631s.
2025-09-17 07:30:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/post_n4".
2025-09-17 07:30:49 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:30:50 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.773424s.
2025-09-17 07:30:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/EPI2MNI".
2025-09-17 07:30:51 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:30:51 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:31:19 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/EPI2MNI/stderr.nipype-init).
2025-09-17 07:31:19 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:31:19 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/SharpenEPI/sub-13_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/SharpenEPI/sub-13_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/SharpenEPI/sub-13_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:32:28 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:32:28 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:32:28 | INFO | niworkflows | Generating visual report
2025-09-17 07:32:44 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.838251s.
2025-09-17 07:32:46 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:32:46 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:32:50 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.694274s.
2025-09-17 07:32:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/smoothness/mapflow/_smoothness0".
2025-09-17 07:32:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:32:52 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.259619s.
2025-09-17 07:32:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/outliers/mapflow/_outliers0".
2025-09-17 07:32:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:32:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.801984s.
2025-09-17 07:32:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/gcor/mapflow/_gcor0".
2025-09-17 07:32:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:32:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.05445s.
2025-09-17 07:32:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/dilated_mask".
2025-09-17 07:32:57 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:32:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018494s.
2025-09-17 07:32:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:32:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:33:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.636362s.
2025-09-17 07:33:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/PlotBrainmask".
2025-09-17 07:33:01 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:33:03 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.227448s.
2025-09-17 07:33:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/post_n4".
2025-09-17 07:33:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:33:04 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.747734s.
2025-09-17 07:33:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/EPI2MNI".
2025-09-17 07:33:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:33:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:33:31 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/EPI2MNI/stderr.nipype-init).
2025-09-17 07:33:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:33:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/SharpenEPI/sub-13_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/SharpenEPI/sub-13_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/SharpenEPI/sub-13_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:34:40 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:34:40 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:34:40 | INFO | niworkflows | Generating visual report
2025-09-17 07:34:57 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.409863s.
2025-09-17 07:34:58 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:34:58 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:35:02 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.64231s.
2025-09-17 07:35:04 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/smoothness/mapflow/_smoothness0".
2025-09-17 07:35:04 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:35:04 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.254426s.
2025-09-17 07:35:06 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/outliers/mapflow/_outliers0".
2025-09-17 07:35:06 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:35:06 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.788028s.
2025-09-17 07:35:08 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/gcor/mapflow/_gcor0".
2025-09-17 07:35:08 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:35:09 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.05172s.
2025-09-17 07:35:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/dilated_mask".
2025-09-17 07:35:10 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:35:10 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017191s.
2025-09-17 07:35:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:35:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:35:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.653364s.
2025-09-17 07:35:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/PlotBrainmask".
2025-09-17 07:35:14 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:35:15 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.236707s.
2025-09-17 07:35:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/final_masked".
2025-09-17 07:35:16 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028396s.
2025-09-17 07:35:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ResampleSegmentation".
2025-09-17 07:35:18 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:19 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.112113s.
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_norm".
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004842s.
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/measures/mapflow/_measures0".
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.402246s.
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022947s.
2025-09-17 07:35:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/subtract_mask".
2025-09-17 07:35:24 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:24 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010258s.
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004712s.
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_bmask".
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004721s.
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/final_masked".
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026041s.
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ResampleSegmentation".
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:29 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.043849s.
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_norm".
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004877s.
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/measures/mapflow/_measures0".
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.417097s.
2025-09-17 07:35:32 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:32 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:32 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.020898s.
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/subtract_mask".
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012092s.
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004764s.
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_bmask".
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004661s.
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/349f99c25831cf23d3f8278116d68270a5fd9450/final_masked".
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027544s.
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/349f99c25831cf23d3f8278116d68270a5fd9450/ResampleSegmentation".
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.055933s.
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_norm".
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00471s.
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/measures/mapflow/_measures0".
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.494765s.
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022641s.
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/subtract_mask".
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013977s.
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004748s.
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_bmask".
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004715s.
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/final_masked".
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026935s.
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ResampleSegmentation".
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.032449s.
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_norm".
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004796s.
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/measures/mapflow/_measures0".
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.45609s.
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016143s.
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/subtract_mask".
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016434s.
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004751s.
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_bmask".
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004686s.
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/final_masked".
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02396s.
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ba2a777f69d0174a12d147c95a5855ace921a3fc/ResampleSegmentation".
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.056518s.
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_norm".
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00464s.
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/measures/mapflow/_measures0".
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.403337s.
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017142s.
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/subtract_mask".
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013413s.
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004844s.
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_bmask".
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004751s.
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/final_masked".
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02749s.
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ResampleSegmentation".
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.052373s.
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_norm".
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004644s.
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/measures/mapflow/_measures0".
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.407546s.
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010937s.
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/subtract_mask".
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013459s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004789s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_bmask".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004745s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/datasink/mapflow/_datasink0".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000478s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004137s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/parcels".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.022739s.
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/datasink/mapflow/_datasink0".
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000407s.
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004037s.
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/parcels".
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021494s.
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/datasink/mapflow/_datasink0".
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000397s.
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/349f99c25831cf23d3f8278116d68270a5fd9450/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003919s.
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/parcels".
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020107s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/datasink/mapflow/_datasink0".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000351s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004108s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/parcels".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019208s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/datasink/mapflow/_datasink0".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000414s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004109s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/parcels".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020443s.
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/datasink/mapflow/_datasink0".
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000361s.
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004312s.
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/parcels".
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01549s.
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.446999s.
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.460107s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.217575s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.983235s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.4180070000000002s.
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.544341s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a684179048ccf4bf5b37dbb318250d4fb331b1c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004698s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1ca94bf73e4fa7c99b86772c4bcf9e93e4167d83/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004678s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/349f99c25831cf23d3f8278116d68270a5fd9450/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004691s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/11d6a39ea7e67ddae5c9b71a007bd20bbd5bfdf2/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004677s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ba2a777f69d0174a12d147c95a5855ace921a3fc/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005199s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5384dd20733cf7aa93d94166c00db0035d8b6b8/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004595s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 5.029519s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 5.079645s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 5.061883s.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.564172s.
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.0313620000000001s.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.556638s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.239203s.
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.123912s.
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:38:19 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 51.236797s.
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:38:21 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.525698s.
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.135501s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.756783s.
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.540198s.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.044537s.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:38:44 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.416098s.
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:48 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.123736s.
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:52 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.174394s.
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004662s.
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:38:56 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=34.5401)
2025-09-17 07:38:56 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=34.5401)
2025-09-17 07:38:56 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=34.5401)
2025-09-17 07:38:59 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.210995s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.00472s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005335s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004363s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004484s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject13.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137070..ds..sourcedata..raw..sub-13..anat..sub-13_T1w.nii.gz_metadata_FileSize0.003240899182856083.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000425s.
2025-09-17 07:39:02 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:39:03 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:39:03 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 18s per subject.
2025-09-17 07:39:03 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 44min 06s).
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