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ds000002-mriqc/logs/duct/sub-12_2025.09.17T08.56.22-2161400stdout
Felix Hoffstaedter 8e979cb838 [DATALAD RUNCMD] Compute MRIQC for sub-12 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-12 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-12",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:40:24 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137093/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:56:25 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:56:25 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:56:25 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:56:25 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-09-17 06:56:25 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065623_cbaf1332-02cf-4d4e-9d3c-a6ae3ddd7bb0.toml.
2025-09-17 06:56:30 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:56:31 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:56:31 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:56:32 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:56:36 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:56:41 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:56:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:56:41 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:56:41 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.278018s.
2025-09-17 06:56:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/ac5ada6ae323757744fb69c9c33331814b56ee05/pick_echo".
2025-09-17 06:56:43 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:43 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000134s.
2025-09-17 06:56:45 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/provenance/mapflow/_provenance0".
2025-09-17 06:56:45 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:45 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.048714s.
2025-09-17 06:56:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/087d7dcf6558fdcf8fbb62e650009a195748704c/pick_echo".
2025-09-17 06:56:45 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:45 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000112s.
2025-09-17 06:56:47 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/provenance/mapflow/_provenance0".
2025-09-17 06:56:47 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:47 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.047515s.
2025-09-17 06:56:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/308bfa07a6f1a35b0bed662729c341586e04125b/pick_echo".
2025-09-17 06:56:47 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:47 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000114s.
2025-09-17 06:56:49 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/provenance/mapflow/_provenance0".
2025-09-17 06:56:49 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:49 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.060676s.
2025-09-17 06:56:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5c814784a58d394a159bdf7e0b3075443141aed3/pick_echo".
2025-09-17 06:56:49 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:49 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/provenance/mapflow/_provenance0".
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.059407s.
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/1f3363258a226b44cf30d6feab9f9b6874d05d04/pick_echo".
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000114s.
2025-09-17 06:56:53 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/provenance/mapflow/_provenance0".
2025-09-17 06:56:53 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:53 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045885s.
2025-09-17 06:56:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/e5da67cff0608d547063dd3c25a111be15241d73/pick_echo".
2025-09-17 06:56:53 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:53 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00012s.
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/provenance/mapflow/_provenance0".
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045653s.
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.071853s.
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.57035s.
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:12 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.691257s.
2025-09-17 06:57:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/ac5ada6ae323757744fb69c9c33331814b56ee05/non_steady_state_detector".
2025-09-17 06:57:13 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:13 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.150678s.
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/087d7dcf6558fdcf8fbb62e650009a195748704c/non_steady_state_detector".
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.148962s.
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/308bfa07a6f1a35b0bed662729c341586e04125b/non_steady_state_detector".
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.148591s.
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5c814784a58d394a159bdf7e0b3075443141aed3/non_steady_state_detector".
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.149668s.
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/1f3363258a226b44cf30d6feab9f9b6874d05d04/non_steady_state_detector".
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151825s.
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/e5da67cff0608d547063dd3c25a111be15241d73/non_steady_state_detector".
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.148891s.
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:58:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 62.746269s.
2025-09-17 06:58:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:58:29 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:58:29 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008474s.
2025-09-17 06:58:29 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/ac5ada6ae323757744fb69c9c33331814b56ee05/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:29 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.034651s.
2025-09-17 06:58:31 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/087d7dcf6558fdcf8fbb62e650009a195748704c/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:31 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.207035s.
2025-09-17 06:58:33 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/308bfa07a6f1a35b0bed662729c341586e04125b/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:33 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:35 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.563623s.
2025-09-17 06:58:35 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5c814784a58d394a159bdf7e0b3075443141aed3/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:35 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:37 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.5702500000000001s.
2025-09-17 06:58:37 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/1f3363258a226b44cf30d6feab9f9b6874d05d04/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:37 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.228736s.
2025-09-17 06:58:39 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/e5da67cff0608d547063dd3c25a111be15241d73/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:39 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.239929s.
2025-09-17 06:58:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:58:41 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:59:31 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 49.705338s.
2025-09-17 06:59:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ac5ada6ae323757744fb69c9c33331814b56ee05/estimate_hm".
2025-09-17 06:59:31 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:01:37 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 126.360628s.
2025-09-17 07:01:39 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:01:39 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:01:40 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.264907s.
2025-09-17 07:01:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/087d7dcf6558fdcf8fbb62e650009a195748704c/estimate_hm".
2025-09-17 07:01:41 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:44 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.44827s.
2025-09-17 07:03:45 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:45 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:03:46 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.254075s.
2025-09-17 07:03:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/308bfa07a6f1a35b0bed662729c341586e04125b/estimate_hm".
2025-09-17 07:03:47 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:06:24 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 156.985214s.
2025-09-17 07:06:25 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:06:25 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:06:27 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.301537s.
2025-09-17 07:06:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5c814784a58d394a159bdf7e0b3075443141aed3/estimate_hm".
2025-09-17 07:06:27 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:03 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 156.173752s.
2025-09-17 07:09:05 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:05 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:07 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.348447s.
2025-09-17 07:09:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1f3363258a226b44cf30d6feab9f9b6874d05d04/estimate_hm".
2025-09-17 07:09:07 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:09 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.766376s.
2025-09-17 07:11:09 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:09 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.315325s.
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e5da67cff0608d547063dd3c25a111be15241d73/estimate_hm".
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:13:12 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 120.932292s.
2025-09-17 07:13:13 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:13:13 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.264929s.
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.162918s.
2025-09-17 07:13:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:13:31 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:13:34 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.567562s.
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.842722s.
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.706106s.
2025-09-17 07:13:43 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ac5ada6ae323757744fb69c9c33331814b56ee05/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:43 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.660022s.
2025-09-17 07:13:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ac5ada6ae323757744fb69c9c33331814b56ee05/ComputeFD".
2025-09-17 07:13:53 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:53 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006565s.
2025-09-17 07:13:55 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:55 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:56 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.416983s.
2025-09-17 07:13:57 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/087d7dcf6558fdcf8fbb62e650009a195748704c/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:57 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:06 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.523164s.
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/087d7dcf6558fdcf8fbb62e650009a195748704c/ComputeFD".
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003606s.
2025-09-17 07:14:09 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:09 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:10 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.416867s.
2025-09-17 07:14:11 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/308bfa07a6f1a35b0bed662729c341586e04125b/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:11 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:22 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 10.975233s.
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/308bfa07a6f1a35b0bed662729c341586e04125b/ComputeFD".
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006304s.
2025-09-17 07:14:25 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:25 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:26 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.521613s.
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5c814784a58d394a159bdf7e0b3075443141aed3/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.14245s.
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5c814784a58d394a159bdf7e0b3075443141aed3/ComputeFD".
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:40 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002996s.
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.502699s.
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1f3363258a226b44cf30d6feab9f9b6874d05d04/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:52 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.566972s.
2025-09-17 07:14:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1f3363258a226b44cf30d6feab9f9b6874d05d04/ComputeFD".
2025-09-17 07:14:54 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:54 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005694s.
2025-09-17 07:14:56 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:56 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:56 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.395311s.
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e5da67cff0608d547063dd3c25a111be15241d73/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:15:06 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.508078s.
2025-09-17 07:15:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e5da67cff0608d547063dd3c25a111be15241d73/ComputeFD".
2025-09-17 07:15:08 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:15:08 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006551s.
2025-09-17 07:15:10 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:10 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:10 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.398689s.
2025-09-17 07:15:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:15:12 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:15:12 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.246775s.
2025-09-17 07:15:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:15:14 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:15:14 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:16:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:16:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:16:28 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:16:29 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:16:29 | INFO | niworkflows | Generating visual report
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 92.98339s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004637s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005218s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/ac5ada6ae323757744fb69c9c33331814b56ee05/mean/mapflow/_mean0".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.623507s.
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/ac5ada6ae323757744fb69c9c33331814b56ee05/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.460538s.
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/quality/mapflow/_quality0".
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.272667s.
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/087d7dcf6558fdcf8fbb62e650009a195748704c/mean/mapflow/_mean0".
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.603439s.
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/087d7dcf6558fdcf8fbb62e650009a195748704c/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.442053s.
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/quality/mapflow/_quality0".
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.238987s.
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/308bfa07a6f1a35b0bed662729c341586e04125b/mean/mapflow/_mean0".
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.677229s.
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/308bfa07a6f1a35b0bed662729c341586e04125b/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.542776s.
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/quality/mapflow/_quality0".
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.528034s.
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5c814784a58d394a159bdf7e0b3075443141aed3/mean/mapflow/_mean0".
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.687248s.
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5c814784a58d394a159bdf7e0b3075443141aed3/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.536862s.
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/quality/mapflow/_quality0".
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.5566010000000001s.
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/1f3363258a226b44cf30d6feab9f9b6874d05d04/mean/mapflow/_mean0".
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.590332s.
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/1f3363258a226b44cf30d6feab9f9b6874d05d04/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.479305s.
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/quality/mapflow/_quality0".
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.214447s.
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/e5da67cff0608d547063dd3c25a111be15241d73/mean/mapflow/_mean0".
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.594445s.
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/e5da67cff0608d547063dd3c25a111be15241d73/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.472801s.
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/quality/mapflow/_quality0".
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.229425s.
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00461s.
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/pre_clip".
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.246951s.
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/SharpenEPI".
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5734409999999999s.
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.62583s.
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.835693s.
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.890181s.
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/pre_clip".
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.243216s.
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/SharpenEPI".
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5798860000000001s.
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.646435s.
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.820106s.
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.906219s.
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/pre_clip".
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.276293s.
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/SharpenEPI".
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.622948s.
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.681732s.
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.837543s.
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.870036s.
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/pre_clip".
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.248256s.
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/SharpenEPI".
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6538s.
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.641011s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.881246s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.88065s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/pre_clip".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.258077s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/SharpenEPI".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.722366s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.699919s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.045037s.
2025-09-17 07:18:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.219279s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/pre_clip".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.267573s.
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/SharpenEPI".
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:17 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.766964s.
2025-09-17 07:18:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.788389s.
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.033028s.
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.051345s.
2025-09-17 07:18:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/pre_n4".
2025-09-17 07:18:24 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.7485629999999999s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00562s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005553s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.006126s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/pre_n4".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.6694689999999999s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005817s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00508s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00538s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/pre_n4".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:32 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.6743139999999999s.
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005463s.
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005266s.
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005576s.
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/pre_n4".
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.633051s.
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.0055s.
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00626s.
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.006146s.
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/pre_n4".
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.621368s.
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005441s.
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005435s.
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005524s.
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/pre_n4".
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.639637s.
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005087s.
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00511s.
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005196s.
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/synthstrip".
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:29 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.208189s.
2025-09-17 07:19:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/synthstrip".
2025-09-17 07:19:30 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.684941s.
2025-09-17 07:20:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/synthstrip".
2025-09-17 07:20:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:00 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.664022s.
2025-09-17 07:21:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/synthstrip".
2025-09-17 07:21:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:46 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.562357s.
2025-09-17 07:21:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/synthstrip".
2025-09-17 07:21:48 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.312599s.
2025-09-17 07:22:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/synthstrip".
2025-09-17 07:22:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:23:16 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 42.430425s.
2025-09-17 07:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/post_n4".
2025-09-17 07:23:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:23:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.77237s.
2025-09-17 07:23:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/EPI2MNI".
2025-09-17 07:23:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:23:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:23:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:23:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/SharpenEPI/sub-12_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/SharpenEPI/sub-12_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/SharpenEPI/sub-12_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:24:57 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:24:57 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:24:57 | INFO | niworkflows | Generating visual report
2025-09-17 07:25:14 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 113.630591s.
2025-09-17 07:25:14 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:25:14 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:25:18 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.036709s.
2025-09-17 07:25:20 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/smoothness/mapflow/_smoothness0".
2025-09-17 07:25:20 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:25:20 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.278928s.
2025-09-17 07:25:22 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/outliers/mapflow/_outliers0".
2025-09-17 07:25:22 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:25:23 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.775487s.
2025-09-17 07:25:24 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/gcor/mapflow/_gcor0".
2025-09-17 07:25:24 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:25:25 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.17044s.
2025-09-17 07:25:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/dilated_mask".
2025-09-17 07:25:26 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:25:26 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017872s.
2025-09-17 07:25:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:25:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:25:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.843459s.
2025-09-17 07:25:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/PlotBrainmask".
2025-09-17 07:25:30 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:25:31 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.310416s.
2025-09-17 07:25:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/post_n4".
2025-09-17 07:25:32 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:25:33 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.72797s.
2025-09-17 07:25:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/EPI2MNI".
2025-09-17 07:25:34 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:25:34 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:26:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:26:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/SharpenEPI/sub-12_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/SharpenEPI/sub-12_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/SharpenEPI/sub-12_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:27:07 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:27:07 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:27:07 | INFO | niworkflows | Generating visual report
2025-09-17 07:27:24 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 109.716278s.
2025-09-17 07:27:24 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:27:24 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:27:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.997442s.
2025-09-17 07:27:30 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/smoothness/mapflow/_smoothness0".
2025-09-17 07:27:30 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:27:30 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.275265s.
2025-09-17 07:27:32 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/outliers/mapflow/_outliers0".
2025-09-17 07:27:32 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:27:33 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.737954s.
2025-09-17 07:27:34 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/gcor/mapflow/_gcor0".
2025-09-17 07:27:34 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:27:35 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.049964s.
2025-09-17 07:27:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/dilated_mask".
2025-09-17 07:27:36 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:27:36 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018486s.
2025-09-17 07:27:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:27:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:27:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.863573s.
2025-09-17 07:27:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/PlotBrainmask".
2025-09-17 07:27:40 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:41 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.333498s.
2025-09-17 07:27:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/post_n4".
2025-09-17 07:27:42 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:27:43 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.736736s.
2025-09-17 07:27:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/EPI2MNI".
2025-09-17 07:27:44 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:27:44 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:28:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/EPI2MNI/stderr.nipype-init).
2025-09-17 07:28:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:28:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/SharpenEPI/sub-12_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/SharpenEPI/sub-12_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/SharpenEPI/sub-12_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:29:20 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:29:20 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:29:20 | INFO | niworkflows | Generating visual report
2025-09-17 07:29:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 113.237205s.
2025-09-17 07:29:38 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:29:38 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:29:42 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.260065s.
2025-09-17 07:29:44 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/smoothness/mapflow/_smoothness0".
2025-09-17 07:29:44 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:29:44 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.253273s.
2025-09-17 07:29:46 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/outliers/mapflow/_outliers0".
2025-09-17 07:29:46 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:29:47 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.859431s.
2025-09-17 07:29:48 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/gcor/mapflow/_gcor0".
2025-09-17 07:29:48 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:29:49 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.275123s.
2025-09-17 07:29:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/dilated_mask".
2025-09-17 07:29:50 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:29:50 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017983s.
2025-09-17 07:29:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:29:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:29:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.848229s.
2025-09-17 07:29:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/PlotBrainmask".
2025-09-17 07:29:54 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:29:55 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.329376s.
2025-09-17 07:29:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/post_n4".
2025-09-17 07:29:56 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:29:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.730648s.
2025-09-17 07:29:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/EPI2MNI".
2025-09-17 07:29:58 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:29:58 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:30:27 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:30:27 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/SharpenEPI/sub-12_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/SharpenEPI/sub-12_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/SharpenEPI/sub-12_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:31:35 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:31:35 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:31:35 | INFO | niworkflows | Generating visual report
2025-09-17 07:31:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 113.622278s.
2025-09-17 07:31:52 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:31:52 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:31:56 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.209942s.
2025-09-17 07:31:58 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/smoothness/mapflow/_smoothness0".
2025-09-17 07:31:58 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:31:58 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.264595s.
2025-09-17 07:32:00 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/outliers/mapflow/_outliers0".
2025-09-17 07:32:00 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:32:01 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.867285s.
2025-09-17 07:32:02 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/gcor/mapflow/_gcor0".
2025-09-17 07:32:02 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:32:03 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.285849s.
2025-09-17 07:32:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/dilated_mask".
2025-09-17 07:32:04 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:32:04 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.020959s.
2025-09-17 07:32:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:32:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:32:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.837393s.
2025-09-17 07:32:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/PlotBrainmask".
2025-09-17 07:32:08 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:32:09 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.328734s.
2025-09-17 07:32:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/post_n4".
2025-09-17 07:32:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:32:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.744642s.
2025-09-17 07:32:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/EPI2MNI".
2025-09-17 07:32:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:32:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:32:40 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/EPI2MNI/stderr.nipype-init).
2025-09-17 07:32:40 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:32:40 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/SharpenEPI/sub-12_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/SharpenEPI/sub-12_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/SharpenEPI/sub-12_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:33:46 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:33:46 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:33:46 | INFO | niworkflows | Generating visual report
2025-09-17 07:34:03 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 110.831304s.
2025-09-17 07:34:04 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:34:04 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:34:08 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.975033s.
2025-09-17 07:34:10 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/smoothness/mapflow/_smoothness0".
2025-09-17 07:34:10 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:34:10 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.239445s.
2025-09-17 07:34:12 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/outliers/mapflow/_outliers0".
2025-09-17 07:34:12 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:34:13 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.726761s.
2025-09-17 07:34:14 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/gcor/mapflow/_gcor0".
2025-09-17 07:34:14 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:34:15 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.029732s.
2025-09-17 07:34:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/dilated_mask".
2025-09-17 07:34:16 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:34:16 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.020379s.
2025-09-17 07:34:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:34:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:34:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.839981s.
2025-09-17 07:34:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/PlotBrainmask".
2025-09-17 07:34:20 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:34:21 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.293024s.
2025-09-17 07:34:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/post_n4".
2025-09-17 07:34:22 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:34:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.740777s.
2025-09-17 07:34:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/EPI2MNI".
2025-09-17 07:34:24 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:34:24 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:34:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/EPI2MNI/stderr.nipype-init).
2025-09-17 07:34:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:34:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/SharpenEPI/sub-12_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/SharpenEPI/sub-12_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/SharpenEPI/sub-12_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:36:04 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:36:04 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:36:04 | INFO | niworkflows | Generating visual report
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 116.723889s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.932589s.
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/smoothness/mapflow/_smoothness0".
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.277939s.
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/outliers/mapflow/_outliers0".
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.709172s.
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/gcor/mapflow/_gcor0".
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.049615s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/dilated_mask".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.021992s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.851359s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/PlotBrainmask".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.347345s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/final_masked".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023181s.
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ac5ada6ae323757744fb69c9c33331814b56ee05/ResampleSegmentation".
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.069467s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_norm".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004855s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/measures/mapflow/_measures0".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.427665s.
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.027043s.
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/subtract_mask".
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015306s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004736s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_bmask".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004674s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/final_masked".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028618s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/087d7dcf6558fdcf8fbb62e650009a195748704c/ResampleSegmentation".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.053395s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_norm".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00479s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/measures/mapflow/_measures0".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.391998s.
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022947s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/subtract_mask".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011119s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004732s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_bmask".
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004787s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/308bfa07a6f1a35b0bed662729c341586e04125b/final_masked".
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027675s.
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/308bfa07a6f1a35b0bed662729c341586e04125b/ResampleSegmentation".
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.005706s.
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_norm".
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004984s.
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/measures/mapflow/_measures0".
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.461454s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.024246s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/subtract_mask".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.018349s.
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005011s.
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_bmask".
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004614s.
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c814784a58d394a159bdf7e0b3075443141aed3/final_masked".
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028542s.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c814784a58d394a159bdf7e0b3075443141aed3/ResampleSegmentation".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.994793s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_norm".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00471s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/measures/mapflow/_measures0".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.478907s.
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016289s.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/subtract_mask".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015337s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004898s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_bmask".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004946s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/final_masked".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027543s.
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1f3363258a226b44cf30d6feab9f9b6874d05d04/ResampleSegmentation".
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.038905s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_norm".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004788s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/measures/mapflow/_measures0".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.381737s.
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018944s.
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/subtract_mask".
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01379s.
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004955s.
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_bmask".
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004769s.
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e5da67cff0608d547063dd3c25a111be15241d73/final_masked".
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024075s.
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e5da67cff0608d547063dd3c25a111be15241d73/ResampleSegmentation".
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.983347s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_norm".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005381s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/measures/mapflow/_measures0".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:35 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.387792s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017216s.
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/subtract_mask".
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015482s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004934s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_bmask".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004754s.
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/datasink/mapflow/_datasink0".
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000561s.
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004472s.
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/parcels".
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.022941s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/datasink/mapflow/_datasink0".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000394s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00415s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/parcels".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:43 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020819s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/datasink/mapflow/_datasink0".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00036s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/308bfa07a6f1a35b0bed662729c341586e04125b/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004032s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/parcels".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.031684s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/datasink/mapflow/_datasink0".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000586s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c814784a58d394a159bdf7e0b3075443141aed3/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004139s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/parcels".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:47 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018865s.
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/datasink/mapflow/_datasink0".
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000381s.
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003958s.
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/parcels".
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017342s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/datasink/mapflow/_datasink0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000367s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e5da67cff0608d547063dd3c25a111be15241d73/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004001s.
2025-09-17 07:37:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/parcels".
2025-09-17 07:37:51 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:51 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015034s.
2025-09-17 07:37:52 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:52 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:55 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.445204s.
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:59 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.358669s.
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:03 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.174114s.
2025-09-17 07:38:04 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:04 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.8907s.
2025-09-17 07:38:08 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:08 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:11 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.392106s.
2025-09-17 07:38:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:15 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.6232990000000003s.
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ac5ada6ae323757744fb69c9c33331814b56ee05/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00482s.
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/087d7dcf6558fdcf8fbb62e650009a195748704c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004673s.
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/308bfa07a6f1a35b0bed662729c341586e04125b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00471s.
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c814784a58d394a159bdf7e0b3075443141aed3/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.013115s.
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1f3363258a226b44cf30d6feab9f9b6874d05d04/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004709s.
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e5da67cff0608d547063dd3c25a111be15241d73/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004752s.
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.508752s.
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:27 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.544659s.
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:33 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.505157s.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:37 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.619822s.
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:39 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.957692s.
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:42 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.617038s.
2025-09-17 07:38:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:38:42 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:38:42 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.245264s.
2025-09-17 07:38:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:38:44 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:49 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.049535s.
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:39:36 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 46.259867s.
2025-09-17 07:39:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:39:38 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:39:40 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.484899s.
2025-09-17 07:39:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:39:40 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:43 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.386515s.
2025-09-17 07:39:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:39:44 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:39:45 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.776671s.
2025-09-17 07:39:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:39:46 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.676822s.
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.042723s.
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:40:03 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.387458s.
2025-09-17 07:40:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:40:04 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:06 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.07526s.
2025-09-17 07:40:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:40:08 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:10 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.149929s.
2025-09-17 07:40:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:40:12 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:12 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004471s.
2025-09-17 07:40:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:40:12 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:40:14 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=24.945)
2025-09-17 07:40:14 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=24.945)
2025-09-17 07:40:14 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=24.945)
2025-09-17 07:40:17 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.919799s.
2025-09-17 07:40:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:40:18 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:18 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004321s.
2025-09-17 07:40:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:40:18 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:18 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004244s.
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004367s.
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.00421s.
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject12.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137093..ds..sourcedata..raw..sub-12..anat..sub-12_T1w.nii.gz_metadata_FileSize0.0032565733417868614.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000411s.
2025-09-17 07:40:20 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:40:22 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:40:22 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 16s per subject.
2025-09-17 07:40:22 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 43min 58s).
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