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ds000002-mriqc/logs/duct/sub-09_2025.09.17T08.56.31-2161693stdout
Felix Hoffstaedter 200eda933d [DATALAD RUNCMD] Compute MRIQC for sub-09 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-09 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-09",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:40:25 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137079/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:56:34 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:56:34 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:56:34 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:56:34 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-09-17 06:56:34 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065632_e6b80734-7e32-4605-99e0-9ab78b7783e0.toml.
2025-09-17 06:56:39 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:56:40 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:56:40 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:56:41 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:56:46 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:56:50 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:56:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:56:50 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:56:51 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.262092s.
2025-09-17 06:56:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/d5c317314f62391be452399168f85cc07b9ba455/pick_echo".
2025-09-17 06:56:52 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:52 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00014s.
2025-09-17 06:56:54 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/provenance/mapflow/_provenance0".
2025-09-17 06:56:54 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.048906s.
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/7751f64e5e149ba4e856afdeae33c255caed345b/pick_echo".
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000116s.
2025-09-17 06:56:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/provenance/mapflow/_provenance0".
2025-09-17 06:56:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.048997s.
2025-09-17 06:56:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/0912aafaffd9f5446388aa2e38f50055e037d8ca/pick_echo".
2025-09-17 06:56:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000112s.
2025-09-17 06:56:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/provenance/mapflow/_provenance0".
2025-09-17 06:56:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.063447s.
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/pick_echo".
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/provenance/mapflow/_provenance0".
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.087455s.
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/pick_echo".
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000121s.
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/provenance/mapflow/_provenance0".
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04886s.
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/be2f94ac829d51cc7fb3bd586d079917803e29d7/pick_echo".
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000439s.
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/provenance/mapflow/_provenance0".
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.048049s.
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.516393s.
2025-09-17 06:57:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:14 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.570842s.
2025-09-17 06:57:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:16 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.669872s.
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/d5c317314f62391be452399168f85cc07b9ba455/non_steady_state_detector".
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159478s.
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/7751f64e5e149ba4e856afdeae33c255caed345b/non_steady_state_detector".
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.182234s.
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/0912aafaffd9f5446388aa2e38f50055e037d8ca/non_steady_state_detector".
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.184085s.
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/non_steady_state_detector".
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.164102s.
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/non_steady_state_detector".
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.160005s.
2025-09-17 06:57:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/be2f94ac829d51cc7fb3bd586d079917803e29d7/non_steady_state_detector".
2025-09-17 06:57:32 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:33 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159081s.
2025-09-17 06:57:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:57:34 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 62.993334s.
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008105s.
2025-09-17 06:58:39 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/d5c317314f62391be452399168f85cc07b9ba455/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:39 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.097813s.
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/7751f64e5e149ba4e856afdeae33c255caed345b/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:42 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.097238s.
2025-09-17 06:58:42 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/0912aafaffd9f5446388aa2e38f50055e037d8ca/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:42 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:44 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.378942s.
2025-09-17 06:58:44 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:44 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:46 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.6217869999999999s.
2025-09-17 06:58:46 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:46 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:48 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.084065s.
2025-09-17 06:58:48 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/be2f94ac829d51cc7fb3bd586d079917803e29d7/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:48 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:50 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.084642s.
2025-09-17 06:58:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:58:50 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:59:41 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 50.223748s.
2025-09-17 06:59:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d5c317314f62391be452399168f85cc07b9ba455/estimate_hm".
2025-09-17 06:59:42 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:01:45 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.099397s.
2025-09-17 07:01:47 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:01:47 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:01:48 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.359298s.
2025-09-17 07:01:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/7751f64e5e149ba4e856afdeae33c255caed345b/estimate_hm".
2025-09-17 07:01:49 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:51 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.980391s.
2025-09-17 07:03:53 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:53 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:03:54 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.297314s.
2025-09-17 07:03:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0912aafaffd9f5446388aa2e38f50055e037d8ca/estimate_hm".
2025-09-17 07:03:55 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:06:33 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 158.843522s.
2025-09-17 07:06:35 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:06:35 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:06:36 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.34482s.
2025-09-17 07:06:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/estimate_hm".
2025-09-17 07:06:37 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:12 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 155.783557s.
2025-09-17 07:09:13 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:13 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:14 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.382292s.
2025-09-17 07:09:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/estimate_hm".
2025-09-17 07:09:15 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 120.657224s.
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:18 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.269876s.
2025-09-17 07:11:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/be2f94ac829d51cc7fb3bd586d079917803e29d7/estimate_hm".
2025-09-17 07:11:19 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:13:21 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.405995s.
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:24 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.364719s.
2025-09-17 07:13:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:13:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:13:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 15.836063s.
2025-09-17 07:13:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:13:41 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:13:44 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.177377s.
2025-09-17 07:13:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:13:45 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.961824s.
2025-09-17 07:13:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:13:51 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:13:54 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.627027s.
2025-09-17 07:13:55 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d5c317314f62391be452399168f85cc07b9ba455/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:55 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.698316s.
2025-09-17 07:14:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d5c317314f62391be452399168f85cc07b9ba455/ComputeFD".
2025-09-17 07:14:05 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:05 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004987s.
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.402864s.
2025-09-17 07:14:09 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/7751f64e5e149ba4e856afdeae33c255caed345b/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:09 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.643243s.
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/7751f64e5e149ba4e856afdeae33c255caed345b/ComputeFD".
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006612s.
2025-09-17 07:14:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:21 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:21 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.402577s.
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0912aafaffd9f5446388aa2e38f50055e037d8ca/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:34 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.255173s.
2025-09-17 07:14:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0912aafaffd9f5446388aa2e38f50055e037d8ca/ComputeFD".
2025-09-17 07:14:35 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:35 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00307s.
2025-09-17 07:14:37 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:37 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:37 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.536179s.
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:50 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.09765s.
2025-09-17 07:14:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ComputeFD".
2025-09-17 07:14:51 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:51 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006987s.
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.517198s.
2025-09-17 07:14:55 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:55 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:15:04 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.655939s.
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ComputeFD".
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005764s.
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.429856s.
2025-09-17 07:15:09 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/be2f94ac829d51cc7fb3bd586d079917803e29d7/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:15:09 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:15:18 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.666496s.
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/be2f94ac829d51cc7fb3bd586d079917803e29d7/ComputeFD".
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004838s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.434477s.
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.253406s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:15:26 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:16:28 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:16:28 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:16:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:16:44 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:16:44 | INFO | niworkflows | Generating visual report
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 96.151394s.
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004814s.
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004844s.
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/d5c317314f62391be452399168f85cc07b9ba455/mean/mapflow/_mean0".
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.631249s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/d5c317314f62391be452399168f85cc07b9ba455/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.469326s.
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/quality/mapflow/_quality0".
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.3583560000000001s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/7751f64e5e149ba4e856afdeae33c255caed345b/mean/mapflow/_mean0".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.633794s.
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/7751f64e5e149ba4e856afdeae33c255caed345b/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.478137s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/quality/mapflow/_quality0".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.318452s.
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/0912aafaffd9f5446388aa2e38f50055e037d8ca/mean/mapflow/_mean0".
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.735306s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/0912aafaffd9f5446388aa2e38f50055e037d8ca/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.545606s.
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/quality/mapflow/_quality0".
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.652301s.
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/mean/mapflow/_mean0".
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.702012s.
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6f716cbc2e9bccf29b49b988a60f2708e12192fa/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.551639s.
2025-09-17 07:17:25 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/quality/mapflow/_quality0".
2025-09-17 07:17:25 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.644671s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/mean/mapflow/_mean0".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.592019s.
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.504512s.
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/quality/mapflow/_quality0".
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.339541s.
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/be2f94ac829d51cc7fb3bd586d079917803e29d7/mean/mapflow/_mean0".
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.608492s.
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/be2f94ac829d51cc7fb3bd586d079917803e29d7/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.504676s.
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/quality/mapflow/_quality0".
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.302837s.
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004595s.
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/pre_clip".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.234734s.
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/SharpenEPI".
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.567466s.
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.657979s.
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.820101s.
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.871008s.
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/pre_clip".
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.242823s.
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/SharpenEPI".
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.607074s.
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.66449s.
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.809441s.
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.859652s.
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/pre_clip".
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.275563s.
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/SharpenEPI".
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.624705s.
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.676393s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.842398s.
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.921167s.
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/pre_clip".
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.251933s.
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/SharpenEPI".
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.722831s.
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.664143s.
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.889972s.
2025-09-17 07:18:17 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:17 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.910809s.
2025-09-17 07:18:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/pre_clip".
2025-09-17 07:18:19 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:19 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.260651s.
2025-09-17 07:18:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/SharpenEPI".
2025-09-17 07:18:21 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.70758s.
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.702211s.
2025-09-17 07:18:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.90931s.
2025-09-17 07:18:27 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:27 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.948915s.
2025-09-17 07:18:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/pre_clip".
2025-09-17 07:18:29 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:29 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.267177s.
2025-09-17 07:18:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/SharpenEPI".
2025-09-17 07:18:31 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:33 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.7678449999999999s.
2025-09-17 07:18:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.713562s.
2025-09-17 07:18:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.93703s.
2025-09-17 07:18:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.995836s.
2025-09-17 07:18:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/pre_n4".
2025-09-17 07:18:39 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.692603s.
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005243s.
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005169s.
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005125s.
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/pre_n4".
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:43 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.651383s.
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005442s.
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005266s.
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005316s.
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/pre_n4".
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:47 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.601738s.
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005694s.
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005768s.
2025-09-17 07:18:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005721s.
2025-09-17 07:18:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/pre_n4".
2025-09-17 07:18:50 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.681222s.
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00557s.
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004845s.
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.007602s.
2025-09-17 07:18:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/pre_n4".
2025-09-17 07:18:54 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:55 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.623367s.
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005427s.
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005193s.
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005219s.
2025-09-17 07:18:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/pre_n4".
2025-09-17 07:18:58 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:59 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.684946s.
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005292s.
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005391s.
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005498s.
2025-09-17 07:19:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/synthstrip".
2025-09-17 07:19:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.982621s.
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/synthstrip".
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.947383s.
2025-09-17 07:20:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/synthstrip".
2025-09-17 07:20:33 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:18 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.884956s.
2025-09-17 07:21:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/synthstrip".
2025-09-17 07:21:19 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:04 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.632s.
2025-09-17 07:22:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/synthstrip".
2025-09-17 07:22:05 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:49 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.184848s.
2025-09-17 07:22:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/synthstrip".
2025-09-17 07:22:51 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:23:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 42.351668s.
2025-09-17 07:23:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/post_n4".
2025-09-17 07:23:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:23:36 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.821934s.
2025-09-17 07:23:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/EPI2MNI".
2025-09-17 07:23:37 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:23:37 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:24:01 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/EPI2MNI/stderr.nipype-init).
2025-09-17 07:24:01 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:24:01 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/SharpenEPI/sub-09_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/SharpenEPI/sub-09_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/SharpenEPI/sub-09_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:25:10 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:25:10 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:25:10 | INFO | niworkflows | Generating visual report
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 109.358293s.
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:25:32 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.824108s.
2025-09-17 07:25:33 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/smoothness/mapflow/_smoothness0".
2025-09-17 07:25:33 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:25:34 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.270778s.
2025-09-17 07:25:35 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/outliers/mapflow/_outliers0".
2025-09-17 07:25:35 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:25:36 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.816588s.
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/gcor/mapflow/_gcor0".
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:25:39 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.1941s.
2025-09-17 07:25:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/dilated_mask".
2025-09-17 07:25:39 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:25:39 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018614s.
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:25:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.688716s.
2025-09-17 07:25:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/PlotBrainmask".
2025-09-17 07:25:43 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.323594s.
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/post_n4".
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:25:46 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.791248s.
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/EPI2MNI".
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:25:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:26:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/EPI2MNI/stderr.nipype-init).
2025-09-17 07:26:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:26:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/SharpenEPI/sub-09_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/SharpenEPI/sub-09_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/SharpenEPI/sub-09_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:27:22 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:27:22 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:27:22 | INFO | niworkflows | Generating visual report
2025-09-17 07:27:39 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.731649s.
2025-09-17 07:27:39 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:27:39 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:27:44 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.763992s.
2025-09-17 07:27:45 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/smoothness/mapflow/_smoothness0".
2025-09-17 07:27:45 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:27:46 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.283s.
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/outliers/mapflow/_outliers0".
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:27:48 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.789669s.
2025-09-17 07:27:49 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/gcor/mapflow/_gcor0".
2025-09-17 07:27:49 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:27:51 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.073443s.
2025-09-17 07:27:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/dilated_mask".
2025-09-17 07:27:51 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:27:51 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017263s.
2025-09-17 07:27:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:27:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:27:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.667372s.
2025-09-17 07:27:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/PlotBrainmask".
2025-09-17 07:27:55 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:57 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.296848s.
2025-09-17 07:27:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/post_n4".
2025-09-17 07:27:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:27:58 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.789352s.
2025-09-17 07:27:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/EPI2MNI".
2025-09-17 07:27:59 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:27:59 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:28:25 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/EPI2MNI/stderr.nipype-init).
2025-09-17 07:28:25 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:28:25 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/SharpenEPI/sub-09_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/SharpenEPI/sub-09_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/SharpenEPI/sub-09_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:29:35 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:29:35 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:29:35 | INFO | niworkflows | Generating visual report
2025-09-17 07:29:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.210913s.
2025-09-17 07:29:54 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:29:54 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:29:59 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.013611s.
2025-09-17 07:30:00 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/smoothness/mapflow/_smoothness0".
2025-09-17 07:30:00 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:30:00 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.277797s.
2025-09-17 07:30:02 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/outliers/mapflow/_outliers0".
2025-09-17 07:30:02 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:30:02 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.948199s.
2025-09-17 07:30:04 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/gcor/mapflow/_gcor0".
2025-09-17 07:30:04 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:30:05 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.339958s.
2025-09-17 07:30:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/dilated_mask".
2025-09-17 07:30:06 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:30:06 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019933s.
2025-09-17 07:30:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:30:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:30:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.67472s.
2025-09-17 07:30:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/PlotBrainmask".
2025-09-17 07:30:10 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:30:11 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.325957s.
2025-09-17 07:30:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/post_n4".
2025-09-17 07:30:12 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:30:12 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.802275s.
2025-09-17 07:30:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/EPI2MNI".
2025-09-17 07:30:14 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:30:14 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:30:37 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/EPI2MNI/stderr.nipype-init).
2025-09-17 07:30:37 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:30:37 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/SharpenEPI/sub-09_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/SharpenEPI/sub-09_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/SharpenEPI/sub-09_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:31:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:31:43 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:31:43 | INFO | niworkflows | Generating visual report
2025-09-17 07:31:59 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 105.834538s.
2025-09-17 07:32:00 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:32:00 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:32:05 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.033682s.
2025-09-17 07:32:06 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/smoothness/mapflow/_smoothness0".
2025-09-17 07:32:06 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:32:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.252662s.
2025-09-17 07:32:08 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/outliers/mapflow/_outliers0".
2025-09-17 07:32:08 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:32:09 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.9695s.
2025-09-17 07:32:10 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/gcor/mapflow/_gcor0".
2025-09-17 07:32:10 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:32:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.298382s.
2025-09-17 07:32:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/dilated_mask".
2025-09-17 07:32:12 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:32:12 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018276s.
2025-09-17 07:32:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:32:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:32:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.659884s.
2025-09-17 07:32:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/PlotBrainmask".
2025-09-17 07:32:16 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:32:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.415519s.
2025-09-17 07:32:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/post_n4".
2025-09-17 07:32:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:32:18 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.777213s.
2025-09-17 07:32:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/EPI2MNI".
2025-09-17 07:32:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:32:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:32:43 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:32:43 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/SharpenEPI/sub-09_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/SharpenEPI/sub-09_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/SharpenEPI/sub-09_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:33:51 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:33:51 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:33:51 | INFO | niworkflows | Generating visual report
2025-09-17 07:34:07 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 107.713013s.
2025-09-17 07:34:08 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:34:08 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:34:12 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.684571s.
2025-09-17 07:34:14 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/smoothness/mapflow/_smoothness0".
2025-09-17 07:34:14 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:34:14 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.273972s.
2025-09-17 07:34:16 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/outliers/mapflow/_outliers0".
2025-09-17 07:34:16 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:34:16 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.811684s.
2025-09-17 07:34:18 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/gcor/mapflow/_gcor0".
2025-09-17 07:34:18 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:34:19 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.056626s.
2025-09-17 07:34:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/dilated_mask".
2025-09-17 07:34:20 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:34:20 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016208s.
2025-09-17 07:34:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:34:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:34:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.881605s.
2025-09-17 07:34:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/PlotBrainmask".
2025-09-17 07:34:24 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:34:25 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.320527s.
2025-09-17 07:34:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/post_n4".
2025-09-17 07:34:26 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:34:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.798011s.
2025-09-17 07:34:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/EPI2MNI".
2025-09-17 07:34:28 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:34:28 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:34:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:34:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/SharpenEPI/sub-09_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/SharpenEPI/sub-09_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/SharpenEPI/sub-09_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:35:58 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:35:58 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:35:58 | INFO | niworkflows | Generating visual report
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 107.176567s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.676835s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/smoothness/mapflow/_smoothness0".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.262053s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/outliers/mapflow/_outliers0".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.806855s.
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/gcor/mapflow/_gcor0".
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.074113s.
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/dilated_mask".
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019118s.
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.653109s.
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/PlotBrainmask".
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.427633s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d5c317314f62391be452399168f85cc07b9ba455/final_masked".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026067s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d5c317314f62391be452399168f85cc07b9ba455/ResampleSegmentation".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.107563s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_norm".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004854s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/measures/mapflow/_measures0".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.449265s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022779s.
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/subtract_mask".
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013458s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004676s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_bmask".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004864s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7751f64e5e149ba4e856afdeae33c255caed345b/final_masked".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025612s.
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7751f64e5e149ba4e856afdeae33c255caed345b/ResampleSegmentation".
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.1314980000000001s.
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_norm".
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004834s.
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/measures/mapflow/_measures0".
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.388631s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010778s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/subtract_mask".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01561s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004947s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_bmask".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004953s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/final_masked".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02955s.
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0912aafaffd9f5446388aa2e38f50055e037d8ca/ResampleSegmentation".
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.065316s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_norm".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004685s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/measures/mapflow/_measures0".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.482714s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016829s.
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/subtract_mask".
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.017347s.
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005099s.
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_bmask".
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005028s.
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/final_masked".
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.029555s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ResampleSegmentation".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.120782s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_norm".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004871s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/measures/mapflow/_measures0".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.497819s.
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017562s.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/subtract_mask".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016204s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004947s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_bmask".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004938s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/final_masked".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026618s.
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ResampleSegmentation".
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.031014s.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_norm".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004781s.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/measures/mapflow/_measures0".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.386406s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017068s.
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/subtract_mask".
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016132s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004721s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_bmask".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004787s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/final_masked".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026927s.
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/be2f94ac829d51cc7fb3bd586d079917803e29d7/ResampleSegmentation".
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.03944s.
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_norm".
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004703s.
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/measures/mapflow/_measures0".
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.395361s.
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.021999s.
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/subtract_mask".
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015552s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00477s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_bmask".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004641s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/datasink/mapflow/_datasink0".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000489s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d5c317314f62391be452399168f85cc07b9ba455/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004124s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/parcels".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.023696s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/datasink/mapflow/_datasink0".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000408s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7751f64e5e149ba4e856afdeae33c255caed345b/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004344s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/parcels".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021366s.
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/datasink/mapflow/_datasink0".
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000382s.
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004075s.
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/parcels".
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.024816s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/datasink/mapflow/_datasink0".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000458s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004249s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/parcels".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018767s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/datasink/mapflow/_datasink0".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000377s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004162s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/parcels".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016711s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/datasink/mapflow/_datasink0".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000369s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004053s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/parcels".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014799s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.469239s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:52 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.481275s.
2025-09-17 07:37:54 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:54 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:57 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.202783s.
2025-09-17 07:37:58 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:58 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:01 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.093928s.
2025-09-17 07:38:02 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:02 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:04 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.464919s.
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:08 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.661816s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d5c317314f62391be452399168f85cc07b9ba455/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005037s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7751f64e5e149ba4e856afdeae33c255caed345b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004965s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0912aafaffd9f5446388aa2e38f50055e037d8ca/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004764s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f716cbc2e9bccf29b49b988a60f2708e12192fa/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005475s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ef10a701ae8df8dbb4e65b2d164b6b08f026ed15/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004697s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/be2f94ac829d51cc7fb3bd586d079917803e29d7/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004513s.
2025-09-17 07:38:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:38:11 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 5.2120239999999995s.
2025-09-17 07:38:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:38:18 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:23 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 5.297801s.
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:29 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 5.26887s.
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.625871s.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.061724s.
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:37 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.613508s.
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.246895s.
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:45 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.324133s.
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:39:39 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 53.305931s.
2025-09-17 07:39:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:39:40 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:39:41 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.524842s.
2025-09-17 07:39:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:39:42 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:44 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.127437s.
2025-09-17 07:39:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:39:46 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:39:47 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.794493s.
2025-09-17 07:39:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:39:48 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.479473s.
2025-09-17 07:39:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:39:52 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:39:52 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.042103s.
2025-09-17 07:39:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:39:52 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:40:04 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.053233s.
2025-09-17 07:40:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:40:06 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:08 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.099004s.
2025-09-17 07:40:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:40:10 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:12 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.211643s.
2025-09-17 07:40:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:40:14 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:14 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004663s.
2025-09-17 07:40:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:40:14 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:40:16 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=37.0691)
2025-09-17 07:40:16 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=37.0691)
2025-09-17 07:40:16 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=37.0691)
2025-09-17 07:40:19 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.147141s.
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004283s.
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004503s.
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004314s.
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004302s.
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject09.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137079..ds..sourcedata..raw..sub-09..anat..sub-09_T1w.nii.gz_metadata_FileSize0.0033250506967306137.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:40:20 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000456s.
2025-09-17 07:40:22 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:40:23 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:40:23 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 15s per subject.
2025-09-17 07:40:23 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 43min 51s).
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