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ds000002-mriqc/logs/duct/sub-07_2025.09.17T08.55.13-2159936stdout
Felix Hoffstaedter f0cffd2127 [DATALAD RUNCMD] Compute MRIQC for sub-07 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-07",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:39:15 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137073/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:55:16 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:55:16 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:55:16 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:55:16 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-09-17 06:55:16 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065514_143fd95b-7e7d-49fb-8f1a-96326af0f9c1.toml.
2025-09-17 06:55:21 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:55:22 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:55:22 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:55:23 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:55:27 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:55:31 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:55:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:55:32 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:55:32 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.277843s.
2025-09-17 06:55:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/pick_echo".
2025-09-17 06:55:34 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:34 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000137s.
2025-09-17 06:55:36 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/provenance/mapflow/_provenance0".
2025-09-17 06:55:36 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:36 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046657s.
2025-09-17 06:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/15746c40bd818c7a2111e7152b40bcffe35eada8/pick_echo".
2025-09-17 06:55:36 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:36 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000102s.
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/provenance/mapflow/_provenance0".
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046696s.
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/8b07bc80872a3cb6f714f052a390de36c08f17f9/pick_echo".
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:38 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000112s.
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/provenance/mapflow/_provenance0".
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.059974s.
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/pick_echo".
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:40 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-09-17 06:55:42 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/provenance/mapflow/_provenance0".
2025-09-17 06:55:42 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:42 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.06075s.
2025-09-17 06:55:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/db121947f9e3a46230594506afbbea6dc7ba0472/pick_echo".
2025-09-17 06:55:42 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:42 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000105s.
2025-09-17 06:55:44 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/provenance/mapflow/_provenance0".
2025-09-17 06:55:44 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:44 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.047247s.
2025-09-17 06:55:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/pick_echo".
2025-09-17 06:55:44 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:55:44 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00011s.
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/provenance/mapflow/_provenance0".
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046336s.
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:55:46 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:55:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.798775s.
2025-09-17 06:55:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:55:56 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:55:56 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.672181s.
2025-09-17 06:55:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:55:58 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:56:02 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.72119s.
2025-09-17 06:56:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/non_steady_state_detector".
2025-09-17 06:56:04 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:04 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151044s.
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/15746c40bd818c7a2111e7152b40bcffe35eada8/non_steady_state_detector".
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.149455s.
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/8b07bc80872a3cb6f714f052a390de36c08f17f9/non_steady_state_detector".
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151893s.
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/non_steady_state_detector".
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152479s.
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/db121947f9e3a46230594506afbbea6dc7ba0472/non_steady_state_detector".
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152127s.
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/non_steady_state_detector".
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15164s.
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 62.364261s.
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008584s.
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.054279s.
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/15746c40bd818c7a2111e7152b40bcffe35eada8/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.213087s.
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/8b07bc80872a3cb6f714f052a390de36c08f17f9/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.5517560000000001s.
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.5416560000000001s.
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/db121947f9e3a46230594506afbbea6dc7ba0472/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.046258s.
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.036195s.
2025-09-17 06:57:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:57:32 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:58:18 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.502851s.
2025-09-17 06:58:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/estimate_hm".
2025-09-17 06:58:20 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:00:29 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 128.898978s.
2025-09-17 07:00:30 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:00:30 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:00:31 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.272686s.
2025-09-17 07:00:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/15746c40bd818c7a2111e7152b40bcffe35eada8/estimate_hm".
2025-09-17 07:00:32 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:02:34 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.983164s.
2025-09-17 07:02:36 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:02:36 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:02:37 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.258376s.
2025-09-17 07:02:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8b07bc80872a3cb6f714f052a390de36c08f17f9/estimate_hm".
2025-09-17 07:02:38 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:05:14 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 156.430933s.
2025-09-17 07:05:16 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:05:16 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:05:17 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.34202s.
2025-09-17 07:05:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/estimate_hm".
2025-09-17 07:05:18 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:07:54 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 155.817477s.
2025-09-17 07:07:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:07:54 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:07:55 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.39083s.
2025-09-17 07:07:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/db121947f9e3a46230594506afbbea6dc7ba0472/estimate_hm".
2025-09-17 07:07:56 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:57 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.473208s.
2025-09-17 07:09:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:58 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.331575s.
2025-09-17 07:10:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/estimate_hm".
2025-09-17 07:10:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:12:02 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.236766s.
2025-09-17 07:12:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:12:04 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:05 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.336252s.
2025-09-17 07:12:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:12:06 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:12:20 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.364767s.
2025-09-17 07:12:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:12:22 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:12:25 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.671397s.
2025-09-17 07:12:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:12:26 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:12:30 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.8375s.
2025-09-17 07:12:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:12:30 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:12:33 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.571198s.
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:43 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.672668999999999s.
2025-09-17 07:12:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ComputeFD".
2025-09-17 07:12:44 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:44 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002524s.
2025-09-17 07:12:46 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:46 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:47 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.395277s.
2025-09-17 07:12:48 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/15746c40bd818c7a2111e7152b40bcffe35eada8/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:48 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:57 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.629111s.
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/15746c40bd818c7a2111e7152b40bcffe35eada8/ComputeFD".
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006106s.
2025-09-17 07:13:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:00 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:01 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.420685s.
2025-09-17 07:13:02 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8b07bc80872a3cb6f714f052a390de36c08f17f9/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:02 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:13 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.263106s.
2025-09-17 07:13:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8b07bc80872a3cb6f714f052a390de36c08f17f9/ComputeFD".
2025-09-17 07:13:14 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:14 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00519s.
2025-09-17 07:13:16 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:16 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:17 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.523639s.
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:29 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.095499s.
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ComputeFD".
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.008245s.
2025-09-17 07:13:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:32 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:33 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.527416s.
2025-09-17 07:13:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/db121947f9e3a46230594506afbbea6dc7ba0472/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:43 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.897725s.
2025-09-17 07:13:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/db121947f9e3a46230594506afbbea6dc7ba0472/ComputeFD".
2025-09-17 07:13:44 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:44 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006498s.
2025-09-17 07:13:46 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:46 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:47 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.41814s.
2025-09-17 07:13:48 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:48 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:57 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.779498s.
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ComputeFD".
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.007715s.
2025-09-17 07:14:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:00 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.408669s.
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:14:03 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.247668s.
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:14:05 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:15:06 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/stderr.nipype-init).
2025-09-17 07:15:06 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:15:06 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:15:21 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:15:22 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:15:22 | INFO | niworkflows | Generating visual report
2025-09-17 07:15:39 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 94.915627s.
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004841s.
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004452s.
2025-09-17 07:15:41 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/mean/mapflow/_mean0".
2025-09-17 07:15:41 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:41 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.63627s.
2025-09-17 07:15:42 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:42 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.488123s.
2025-09-17 07:15:44 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/quality/mapflow/_quality0".
2025-09-17 07:15:44 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:46 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.341646s.
2025-09-17 07:15:46 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/15746c40bd818c7a2111e7152b40bcffe35eada8/mean/mapflow/_mean0".
2025-09-17 07:15:46 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.602124s.
2025-09-17 07:15:48 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/15746c40bd818c7a2111e7152b40bcffe35eada8/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:48 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.479828s.
2025-09-17 07:15:50 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/quality/mapflow/_quality0".
2025-09-17 07:15:50 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:52 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.26821s.
2025-09-17 07:15:52 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/8b07bc80872a3cb6f714f052a390de36c08f17f9/mean/mapflow/_mean0".
2025-09-17 07:15:52 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:53 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.715414s.
2025-09-17 07:15:54 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/8b07bc80872a3cb6f714f052a390de36c08f17f9/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:54 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.573913s.
2025-09-17 07:15:56 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/quality/mapflow/_quality0".
2025-09-17 07:15:56 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:58 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.583356s.
2025-09-17 07:15:58 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/mean/mapflow/_mean0".
2025-09-17 07:15:58 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:59 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.69481s.
2025-09-17 07:16:00 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:00 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:01 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.539833s.
2025-09-17 07:16:02 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/quality/mapflow/_quality0".
2025-09-17 07:16:02 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:04 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.580066s.
2025-09-17 07:16:04 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/db121947f9e3a46230594506afbbea6dc7ba0472/mean/mapflow/_mean0".
2025-09-17 07:16:04 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:05 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.590634s.
2025-09-17 07:16:06 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/db121947f9e3a46230594506afbbea6dc7ba0472/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:06 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.480402s.
2025-09-17 07:16:08 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/quality/mapflow/_quality0".
2025-09-17 07:16:08 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:10 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.2888359999999999s.
2025-09-17 07:16:10 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/mean/mapflow/_mean0".
2025-09-17 07:16:10 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.612571s.
2025-09-17 07:16:12 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:12 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:13 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.500382s.
2025-09-17 07:16:14 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/quality/mapflow/_quality0".
2025-09-17 07:16:14 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.264286s.
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004671s.
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/pre_clip".
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:17 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.242392s.
2025-09-17 07:16:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/SharpenEPI".
2025-09-17 07:16:18 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.561649s.
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.690789s.
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.887632s.
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.949862s.
2025-09-17 07:16:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/pre_clip".
2025-09-17 07:16:26 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.251612s.
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/SharpenEPI".
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.665679s.
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.676439s.
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.931585s.
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.953294s.
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/pre_clip".
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.273976s.
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/SharpenEPI".
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.655665s.
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.687822s.
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.841205s.
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.892059s.
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/pre_clip".
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.253251s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/SharpenEPI".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6893099999999999s.
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.660007s.
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.897203s.
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.942436s.
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/pre_clip".
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.259669s.
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/SharpenEPI".
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.671157s.
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.720221s.
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.899988s.
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.84436s.
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/pre_clip".
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.256496s.
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/SharpenEPI".
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.654989s.
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.6892s.
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.825896s.
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.854645s.
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/pre_n4".
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.6077219999999999s.
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005235s.
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004818s.
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004954s.
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/pre_n4".
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.6015549999999998s.
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005737s.
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004847s.
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004805s.
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/pre_n4".
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5885470000000002s.
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004935s.
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005672s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005567s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/pre_n4".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.585737s.
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004905s.
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004791s.
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.008934s.
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/pre_n4".
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5482930000000001s.
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004737s.
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004876s.
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004814s.
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/pre_n4".
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.617671s.
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004951s.
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004872s.
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004848s.
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/synthstrip".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:19 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.860326s.
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/synthstrip".
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.996595s.
2025-09-17 07:19:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/synthstrip".
2025-09-17 07:19:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:46 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.35982s.
2025-09-17 07:19:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/synthstrip".
2025-09-17 07:19:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.044733s.
2025-09-17 07:20:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/synthstrip".
2025-09-17 07:20:32 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.198139s.
2025-09-17 07:21:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/synthstrip".
2025-09-17 07:21:18 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.654932s.
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/post_n4".
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:22:03 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.800419s.
2025-09-17 07:22:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/EPI2MNI".
2025-09-17 07:22:04 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:22:04 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:22:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:22:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/SharpenEPI/sub-07_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/SharpenEPI/sub-07_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/SharpenEPI/sub-07_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:23:47 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:23:47 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:23:47 | INFO | niworkflows | Generating visual report
2025-09-17 07:24:04 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 119.490837s.
2025-09-17 07:24:05 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:24:05 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:24:09 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.22977s.
2025-09-17 07:24:11 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/smoothness/mapflow/_smoothness0".
2025-09-17 07:24:11 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:24:11 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.240093s.
2025-09-17 07:24:13 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/outliers/mapflow/_outliers0".
2025-09-17 07:24:13 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:24:13 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.783073s.
2025-09-17 07:24:15 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/gcor/mapflow/_gcor0".
2025-09-17 07:24:15 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:24:16 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.175742s.
2025-09-17 07:24:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/dilated_mask".
2025-09-17 07:24:17 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:24:17 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018258s.
2025-09-17 07:24:19 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:24:19 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:24:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.822025s.
2025-09-17 07:24:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/PlotBrainmask".
2025-09-17 07:24:21 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:24:22 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.2675779999999999s.
2025-09-17 07:24:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/post_n4".
2025-09-17 07:24:23 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:24:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.754986s.
2025-09-17 07:24:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/EPI2MNI".
2025-09-17 07:24:25 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:24:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:24:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:24:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/SharpenEPI/sub-07_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/SharpenEPI/sub-07_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/SharpenEPI/sub-07_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:26:03 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:26:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:26:03 | INFO | niworkflows | Generating visual report
2025-09-17 07:26:20 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 115.136591s.
2025-09-17 07:26:21 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:26:21 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.20277s.
2025-09-17 07:26:27 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/smoothness/mapflow/_smoothness0".
2025-09-17 07:26:27 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:26:27 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.245068s.
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/outliers/mapflow/_outliers0".
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.747451s.
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/gcor/mapflow/_gcor0".
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:26:32 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.03278s.
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/dilated_mask".
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018437s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.861061s.
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/PlotBrainmask".
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:26:38 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.304829s.
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/post_n4".
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.750576s.
2025-09-17 07:26:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/EPI2MNI".
2025-09-17 07:26:41 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:26:41 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:27:07 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/EPI2MNI/stderr.nipype-init).
2025-09-17 07:27:07 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:27:07 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/SharpenEPI/sub-07_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/SharpenEPI/sub-07_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/SharpenEPI/sub-07_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:28:13 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:28:13 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:28:13 | INFO | niworkflows | Generating visual report
2025-09-17 07:28:30 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 109.75372s.
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:28:35 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.424914s.
2025-09-17 07:28:37 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/smoothness/mapflow/_smoothness0".
2025-09-17 07:28:37 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:28:37 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.24515s.
2025-09-17 07:28:39 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/outliers/mapflow/_outliers0".
2025-09-17 07:28:39 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:28:40 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.849915s.
2025-09-17 07:28:41 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/gcor/mapflow/_gcor0".
2025-09-17 07:28:41 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:28:42 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.260035s.
2025-09-17 07:28:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/dilated_mask".
2025-09-17 07:28:43 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:28:43 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019338s.
2025-09-17 07:28:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:28:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:28:45 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.845331s.
2025-09-17 07:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/PlotBrainmask".
2025-09-17 07:28:47 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:48 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.3014000000000001s.
2025-09-17 07:28:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/post_n4".
2025-09-17 07:28:49 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:28:49 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.753706s.
2025-09-17 07:28:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/EPI2MNI".
2025-09-17 07:28:51 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:28:51 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:29:17 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/EPI2MNI/stderr.nipype-init).
2025-09-17 07:29:17 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:29:17 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/SharpenEPI/sub-07_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/SharpenEPI/sub-07_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/SharpenEPI/sub-07_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:30:27 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:30:27 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:30:27 | INFO | niworkflows | Generating visual report
2025-09-17 07:30:43 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.437971s.
2025-09-17 07:30:45 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:30:45 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:30:49 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.444852s.
2025-09-17 07:30:51 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/smoothness/mapflow/_smoothness0".
2025-09-17 07:30:51 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:30:51 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.241827s.
2025-09-17 07:30:53 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/outliers/mapflow/_outliers0".
2025-09-17 07:30:53 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:30:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.851077s.
2025-09-17 07:30:55 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/gcor/mapflow/_gcor0".
2025-09-17 07:30:55 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:30:56 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.253814s.
2025-09-17 07:30:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/dilated_mask".
2025-09-17 07:30:57 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:30:57 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.028192s.
2025-09-17 07:30:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:30:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:31:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.825841s.
2025-09-17 07:31:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/PlotBrainmask".
2025-09-17 07:31:01 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:31:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.263319s.
2025-09-17 07:31:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/post_n4".
2025-09-17 07:31:03 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:31:03 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.739743s.
2025-09-17 07:31:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/EPI2MNI".
2025-09-17 07:31:05 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:31:05 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:31:32 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:31:32 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/SharpenEPI/sub-07_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/SharpenEPI/sub-07_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/SharpenEPI/sub-07_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:32:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:32:39 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:32:39 | INFO | niworkflows | Generating visual report
2025-09-17 07:32:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.404706s.
2025-09-17 07:32:57 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:32:57 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:33:01 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.175171s.
2025-09-17 07:33:03 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/smoothness/mapflow/_smoothness0".
2025-09-17 07:33:03 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:33:03 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.244691s.
2025-09-17 07:33:05 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/outliers/mapflow/_outliers0".
2025-09-17 07:33:05 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:33:06 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.76339s.
2025-09-17 07:33:07 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/gcor/mapflow/_gcor0".
2025-09-17 07:33:07 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:33:08 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.037428s.
2025-09-17 07:33:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/dilated_mask".
2025-09-17 07:33:09 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:33:09 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015806s.
2025-09-17 07:33:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:33:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:33:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.791061s.
2025-09-17 07:33:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/PlotBrainmask".
2025-09-17 07:33:13 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:33:14 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.245341s.
2025-09-17 07:33:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/post_n4".
2025-09-17 07:33:15 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:33:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.73936s.
2025-09-17 07:33:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/EPI2MNI".
2025-09-17 07:33:17 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:33:17 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:33:45 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:33:45 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/SharpenEPI/sub-07_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/SharpenEPI/sub-07_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/SharpenEPI/sub-07_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:34:56 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:34:56 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:34:56 | INFO | niworkflows | Generating visual report
2025-09-17 07:35:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 115.911499s.
2025-09-17 07:35:13 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:35:13 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:35:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.19288s.
2025-09-17 07:35:19 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/smoothness/mapflow/_smoothness0".
2025-09-17 07:35:19 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:35:19 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.246838s.
2025-09-17 07:35:21 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/outliers/mapflow/_outliers0".
2025-09-17 07:35:21 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.750415s.
2025-09-17 07:35:23 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/gcor/mapflow/_gcor0".
2025-09-17 07:35:23 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:35:24 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.04452s.
2025-09-17 07:35:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/dilated_mask".
2025-09-17 07:35:25 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:35:25 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.020984s.
2025-09-17 07:35:27 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:35:27 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.777938s.
2025-09-17 07:35:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/PlotBrainmask".
2025-09-17 07:35:29 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.27366s.
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/final_masked".
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027631s.
2025-09-17 07:35:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ResampleSegmentation".
2025-09-17 07:35:33 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.094543s.
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_norm".
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004839s.
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/measures/mapflow/_measures0".
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.423495s.
2025-09-17 07:35:37 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:37 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:37 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.026112s.
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/subtract_mask".
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015577s.
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004935s.
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_bmask".
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004707s.
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/final_masked".
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027761s.
2025-09-17 07:35:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/15746c40bd818c7a2111e7152b40bcffe35eada8/ResampleSegmentation".
2025-09-17 07:35:43 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.012186s.
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_norm".
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004732s.
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/measures/mapflow/_measures0".
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.406493s.
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.012286s.
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/subtract_mask".
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008206s.
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004785s.
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_bmask".
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004712s.
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/final_masked".
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026703s.
2025-09-17 07:35:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8b07bc80872a3cb6f714f052a390de36c08f17f9/ResampleSegmentation".
2025-09-17 07:35:53 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.039518s.
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_norm".
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004663s.
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/measures/mapflow/_measures0".
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.459853s.
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015828s.
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/subtract_mask".
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012318s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004685s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_bmask".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004653s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/final_masked".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027022s.
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ResampleSegmentation".
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.010651s.
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_norm".
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004644s.
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/measures/mapflow/_measures0".
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.458231s.
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010224s.
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/subtract_mask".
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008178s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004772s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_bmask".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004877s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/db121947f9e3a46230594506afbbea6dc7ba0472/final_masked".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038595s.
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/db121947f9e3a46230594506afbbea6dc7ba0472/ResampleSegmentation".
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.015753s.
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_norm".
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004763s.
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/measures/mapflow/_measures0".
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.405251s.
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.013747s.
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/subtract_mask".
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.018206s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004662s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_bmask".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00464s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/final_masked".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02647s.
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ResampleSegmentation".
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.067122s.
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_norm".
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004839s.
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/measures/mapflow/_measures0".
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.383933s.
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022232s.
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/subtract_mask".
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014487s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00486s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_bmask".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004786s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/datasink/mapflow/_datasink0".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00051s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004453s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/parcels".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019449s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/datasink/mapflow/_datasink0".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00046s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004202s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/parcels".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.023113s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/datasink/mapflow/_datasink0".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000388s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004118s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/parcels".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020719s.
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/datasink/mapflow/_datasink0".
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000371s.
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00405s.
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/parcels".
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01567s.
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/datasink/mapflow/_datasink0".
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000368s.
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/db121947f9e3a46230594506afbbea6dc7ba0472/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.006112s.
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/parcels".
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016696s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/datasink/mapflow/_datasink0".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000385s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004895s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/parcels".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.011867s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.47137s.
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.397659s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.153613s.
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.028904s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.387652s.
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.567951s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbf6b4ba5773140e3cc8d965c7f770dc018e13c7/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004709s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/15746c40bd818c7a2111e7152b40bcffe35eada8/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00476s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8b07bc80872a3cb6f714f052a390de36c08f17f9/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004591s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/608ada0cdd10bc9e864c7ca782428a24fc89f6c1/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004718s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/db121947f9e3a46230594506afbbea6dc7ba0472/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004608s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0ded7ab6b8823c8aa56164d7a82c36fc74303d86/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004592s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.718614s.
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.769869s.
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.706621s.
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.536429s.
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.927981s.
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.55435s.
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.254717s.
2025-09-17 07:37:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:37:35 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.127112s.
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 47.562909s.
2025-09-17 07:38:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:38:29 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.5781990000000001s.
2025-09-17 07:38:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:38:31 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:33 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.219043s.
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.744405s.
2025-09-17 07:38:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:38:37 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:39 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.428746s.
2025-09-17 07:38:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:38:41 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:38:41 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.042652s.
2025-09-17 07:38:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:38:41 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.072193s.
2025-09-17 07:38:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:38:55 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:57 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.278819s.
2025-09-17 07:38:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:38:59 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:01 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.207772s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004482s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:39:05 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=26.5151)
2025-09-17 07:39:05 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=26.5151)
2025-09-17 07:39:05 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=26.5151)
2025-09-17 07:39:08 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.378705s.
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004323s.
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004381s.
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004431s.
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004375s.
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject07.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137073..ds..sourcedata..raw..sub-07..anat..sub-07_T1w.nii.gz_metadata_FileSize0.0031315097585320473.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000459s.
2025-09-17 07:39:11 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:39:12 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:39:12 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 16s per subject.
2025-09-17 07:39:12 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 43min 58s).
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