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ds000002-mriqc/logs/duct/sub-05_2025.09.17T08.55.43-2160509stdout
Felix Hoffstaedter 94c478f684 [DATALAD RUNCMD] Compute MRIQC for sub-05 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-05 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-05",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:39:54 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137097/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:55:46 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:55:46 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:55:46 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:55:46 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-09-17 06:55:46 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065544_cbf16dab-5c0e-4a9d-984f-2773d5dc01a0.toml.
2025-09-17 06:55:50 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:55:52 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:55:52 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:55:53 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:55:57 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:56:01 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:56:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:56:02 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:56:02 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.251215s.
2025-09-17 06:56:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/pick_echo".
2025-09-17 06:56:04 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:04 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000133s.
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/provenance/mapflow/_provenance0".
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044904s.
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/68d1cb8d2606268134ac630585faee822af640e4/pick_echo".
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:06 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000111s.
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/provenance/mapflow/_provenance0".
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045325s.
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/768d7204d49a459fcdc659f36fb7753e7615a51f/pick_echo".
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:08 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000108s.
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/provenance/mapflow/_provenance0".
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.058829s.
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/81f5525e1d971493ff5c92aecb882673540f9ff7/pick_echo".
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:10 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000105s.
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/provenance/mapflow/_provenance0".
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.059268s.
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/pick_echo".
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:12 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000108s.
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/provenance/mapflow/_provenance0".
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045367s.
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/a88a955c328c80290dbd226ca378b0868923019f/pick_echo".
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:14 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 9.8e-05s.
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/provenance/mapflow/_provenance0".
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045502s.
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:56:16 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:56:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.732356s.
2025-09-17 06:56:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:56:26 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:56:26 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.702801s.
2025-09-17 06:56:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:56:28 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:56:33 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.789668s.
2025-09-17 06:56:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/non_steady_state_detector".
2025-09-17 06:56:34 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:34 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.154483s.
2025-09-17 06:56:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/68d1cb8d2606268134ac630585faee822af640e4/non_steady_state_detector".
2025-09-17 06:56:36 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:36 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151472s.
2025-09-17 06:56:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/768d7204d49a459fcdc659f36fb7753e7615a51f/non_steady_state_detector".
2025-09-17 06:56:38 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:38 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.155049s.
2025-09-17 06:56:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/81f5525e1d971493ff5c92aecb882673540f9ff7/non_steady_state_detector".
2025-09-17 06:56:40 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:40 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.155274s.
2025-09-17 06:56:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/non_steady_state_detector".
2025-09-17 06:56:42 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:42 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.154642s.
2025-09-17 06:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/a88a955c328c80290dbd226ca378b0868923019f/non_steady_state_detector".
2025-09-17 06:56:44 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:44 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.156031s.
2025-09-17 06:56:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:56:46 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:57:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 62.344268s.
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008275s.
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:51 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.180659s.
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/68d1cb8d2606268134ac630585faee822af640e4/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:53 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.175519s.
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/768d7204d49a459fcdc659f36fb7753e7615a51f/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:55 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.492885s.
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/81f5525e1d971493ff5c92aecb882673540f9ff7/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:57 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.496802s.
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:59 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.199486s.
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/a88a955c328c80290dbd226ca378b0868923019f/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:01 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.207585s.
2025-09-17 06:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:58:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:58:48 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.398407s.
2025-09-17 06:58:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/estimate_hm".
2025-09-17 06:58:50 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:00:56 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 126.405057s.
2025-09-17 07:00:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:00:58 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:00:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.264211s.
2025-09-17 07:01:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/68d1cb8d2606268134ac630585faee822af640e4/estimate_hm".
2025-09-17 07:01:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:03 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.616458s.
2025-09-17 07:03:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:04 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:03:05 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.241005s.
2025-09-17 07:03:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/768d7204d49a459fcdc659f36fb7753e7615a51f/estimate_hm".
2025-09-17 07:03:06 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:05:43 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 157.352696s.
2025-09-17 07:05:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:05:44 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:05:45 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.315718s.
2025-09-17 07:05:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/81f5525e1d971493ff5c92aecb882673540f9ff7/estimate_hm".
2025-09-17 07:05:46 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:08:23 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 157.113996s.
2025-09-17 07:08:24 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:08:24 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:08:25 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.299583s.
2025-09-17 07:08:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/estimate_hm".
2025-09-17 07:08:26 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:10:27 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 120.810915s.
2025-09-17 07:10:28 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:10:28 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:10:29 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.268513s.
2025-09-17 07:10:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a88a955c328c80290dbd226ca378b0868923019f/estimate_hm".
2025-09-17 07:10:30 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:12:33 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.503199s.
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:36 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.265631s.
2025-09-17 07:12:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:12:36 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:12:50 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 13.637643s.
2025-09-17 07:12:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:12:50 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:12:53 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.528398s.
2025-09-17 07:12:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:12:54 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.646652s.
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:13:01 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.631995s.
2025-09-17 07:13:02 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:02 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:11 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.861295s.
2025-09-17 07:13:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ComputeFD".
2025-09-17 07:13:12 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:12 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002501s.
2025-09-17 07:13:14 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:14 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.400373s.
2025-09-17 07:13:16 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/68d1cb8d2606268134ac630585faee822af640e4/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:16 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:25 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.705401s.
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/68d1cb8d2606268134ac630585faee822af640e4/ComputeFD".
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002612s.
2025-09-17 07:13:28 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:28 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:29 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.403557s.
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/768d7204d49a459fcdc659f36fb7753e7615a51f/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.356283s.
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/768d7204d49a459fcdc659f36fb7753e7615a51f/ComputeFD".
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.007176s.
2025-09-17 07:13:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:44 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:45 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.485206s.
2025-09-17 07:13:46 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/81f5525e1d971493ff5c92aecb882673540f9ff7/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:46 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.279164s.
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/81f5525e1d971493ff5c92aecb882673540f9ff7/ComputeFD".
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:58 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002947s.
2025-09-17 07:14:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:00 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.49169s.
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:11 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.607293s.
2025-09-17 07:14:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ComputeFD".
2025-09-17 07:14:12 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:12 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003488s.
2025-09-17 07:14:14 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:14 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.412803s.
2025-09-17 07:14:16 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a88a955c328c80290dbd226ca378b0868923019f/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:16 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:25 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.848481s.
2025-09-17 07:14:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a88a955c328c80290dbd226ca378b0868923019f/ComputeFD".
2025-09-17 07:14:26 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:26 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005326s.
2025-09-17 07:14:28 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:28 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.397513s.
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.239464s.
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:14:33 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:15:32 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/stderr.nipype-init).
2025-09-17 07:15:32 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:15:32 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:15:46 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:15:47 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:15:47 | INFO | niworkflows | Generating visual report
2025-09-17 07:16:05 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 92.369435s.
2025-09-17 07:16:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:16:06 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:06 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005019s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004828s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/mean/mapflow/_mean0".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.662893s.
2025-09-17 07:16:08 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c60ff69f24f6c2a2d40aec47924fe6654083eba4/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:08 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:09 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.437989s.
2025-09-17 07:16:10 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/quality/mapflow/_quality0".
2025-09-17 07:16:10 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:12 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.252407s.
2025-09-17 07:16:12 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/68d1cb8d2606268134ac630585faee822af640e4/mean/mapflow/_mean0".
2025-09-17 07:16:12 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:13 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.575572s.
2025-09-17 07:16:14 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/68d1cb8d2606268134ac630585faee822af640e4/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:14 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:15 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.446259s.
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/quality/mapflow/_quality0".
2025-09-17 07:16:16 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:18 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.232685s.
2025-09-17 07:16:18 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/768d7204d49a459fcdc659f36fb7753e7615a51f/mean/mapflow/_mean0".
2025-09-17 07:16:18 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:19 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.676987s.
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/768d7204d49a459fcdc659f36fb7753e7615a51f/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.566337s.
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/quality/mapflow/_quality0".
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.5661969999999998s.
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/81f5525e1d971493ff5c92aecb882673540f9ff7/mean/mapflow/_mean0".
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.698696s.
2025-09-17 07:16:26 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/81f5525e1d971493ff5c92aecb882673540f9ff7/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:26 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.562997s.
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/quality/mapflow/_quality0".
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.574066s.
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/mean/mapflow/_mean0".
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.618531s.
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.451372s.
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/quality/mapflow/_quality0".
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.237272s.
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/a88a955c328c80290dbd226ca378b0868923019f/mean/mapflow/_mean0".
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.5534s.
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/a88a955c328c80290dbd226ca378b0868923019f/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.45287s.
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/quality/mapflow/_quality0".
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.221038s.
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004711s.
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/pre_clip".
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.237089s.
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/SharpenEPI".
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.570964s.
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.663785s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.896995s.
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.879197s.
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/pre_clip".
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.269837s.
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/SharpenEPI".
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.69295s.
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.704001s.
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.89697s.
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.913162s.
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/pre_clip".
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.245561s.
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/SharpenEPI".
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.582217s.
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.676886s.
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.894729s.
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.925655s.
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/pre_clip".
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.248292s.
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/SharpenEPI".
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6587429999999999s.
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.714765s.
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.923424s.
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.882121s.
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/pre_clip".
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.256126s.
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/SharpenEPI".
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6041729999999998s.
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.721056s.
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.925202s.
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.886202s.
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/pre_clip".
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.251982s.
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/SharpenEPI".
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.610152s.
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.671171s.
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.894496s.
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.882791s.
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/pre_n4".
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.592373s.
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005113s.
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005823s.
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005088s.
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/pre_n4".
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.540187s.
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005071s.
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004912s.
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005342s.
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/pre_n4".
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.51431s.
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005152s.
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004777s.
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005019s.
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/pre_n4".
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.558284s.
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004854s.
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004884s.
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005161s.
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/pre_n4".
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.544189s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004897s.
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004811s.
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005019s.
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/pre_n4".
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.546345s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005059s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005153s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004934s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/synthstrip".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:46 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.592907s.
2025-09-17 07:18:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/synthstrip".
2025-09-17 07:18:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:29 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 42.590976s.
2025-09-17 07:19:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/synthstrip".
2025-09-17 07:19:31 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:15 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.044353s.
2025-09-17 07:20:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/synthstrip".
2025-09-17 07:20:17 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.406742s.
2025-09-17 07:21:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/synthstrip".
2025-09-17 07:21:03 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:47 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.013057s.
2025-09-17 07:21:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/synthstrip".
2025-09-17 07:21:49 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.555259s.
2025-09-17 07:22:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/post_n4".
2025-09-17 07:22:33 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:22:33 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.805907s.
2025-09-17 07:22:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/EPI2MNI".
2025-09-17 07:22:35 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:22:35 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:23:08 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/EPI2MNI/stderr.nipype-init).
2025-09-17 07:23:08 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:23:08 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/SharpenEPI/sub-05_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/SharpenEPI/sub-05_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/SharpenEPI/sub-05_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:24:20 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:24:20 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:24:20 | INFO | niworkflows | Generating visual report
2025-09-17 07:24:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 122.760383s.
2025-09-17 07:24:39 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:24:39 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:24:43 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.915464s.
2025-09-17 07:24:45 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/smoothness/mapflow/_smoothness0".
2025-09-17 07:24:45 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:24:45 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.246094s.
2025-09-17 07:24:47 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/outliers/mapflow/_outliers0".
2025-09-17 07:24:47 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:24:47 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.748242s.
2025-09-17 07:24:49 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/gcor/mapflow/_gcor0".
2025-09-17 07:24:49 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:24:50 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.163136s.
2025-09-17 07:24:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/dilated_mask".
2025-09-17 07:24:51 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:24:51 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018306s.
2025-09-17 07:24:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:24:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.876204s.
2025-09-17 07:24:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/PlotBrainmask".
2025-09-17 07:24:55 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.269519s.
2025-09-17 07:24:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/post_n4".
2025-09-17 07:24:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:24:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.692311s.
2025-09-17 07:24:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/EPI2MNI".
2025-09-17 07:24:59 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:24:59 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:25:29 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/EPI2MNI/stderr.nipype-init).
2025-09-17 07:25:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:25:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/SharpenEPI/sub-05_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/SharpenEPI/sub-05_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/SharpenEPI/sub-05_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:26:35 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:26:35 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:26:35 | INFO | niworkflows | Generating visual report
2025-09-17 07:26:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 113.070513s.
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:26:57 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.885598s.
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/smoothness/mapflow/_smoothness0".
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.243306s.
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/outliers/mapflow/_outliers0".
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.688578s.
2025-09-17 07:27:03 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/gcor/mapflow/_gcor0".
2025-09-17 07:27:03 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:27:04 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.040748s.
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/dilated_mask".
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018737s.
2025-09-17 07:27:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:27:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:27:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.818459s.
2025-09-17 07:27:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/PlotBrainmask".
2025-09-17 07:27:09 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:10 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.284649s.
2025-09-17 07:27:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/post_n4".
2025-09-17 07:27:11 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:27:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.719356s.
2025-09-17 07:27:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/EPI2MNI".
2025-09-17 07:27:13 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:27:13 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:27:43 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/EPI2MNI/stderr.nipype-init).
2025-09-17 07:27:43 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:27:43 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/SharpenEPI/sub-05_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/SharpenEPI/sub-05_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/SharpenEPI/sub-05_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:28:51 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:28:51 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:28:51 | INFO | niworkflows | Generating visual report
2025-09-17 07:29:08 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.877916s.
2025-09-17 07:29:09 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:29:09 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:29:13 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.095758s.
2025-09-17 07:29:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/smoothness/mapflow/_smoothness0".
2025-09-17 07:29:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:29:15 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.252218s.
2025-09-17 07:29:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/outliers/mapflow/_outliers0".
2025-09-17 07:29:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:29:18 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.802131s.
2025-09-17 07:29:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/gcor/mapflow/_gcor0".
2025-09-17 07:29:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:29:20 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.252805s.
2025-09-17 07:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/dilated_mask".
2025-09-17 07:29:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:29:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.020095s.
2025-09-17 07:29:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:29:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:29:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.849973s.
2025-09-17 07:29:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/PlotBrainmask".
2025-09-17 07:29:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:29:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.29825s.
2025-09-17 07:29:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/post_n4".
2025-09-17 07:29:27 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:29:28 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.727716s.
2025-09-17 07:29:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/EPI2MNI".
2025-09-17 07:29:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:29:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:29:58 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/EPI2MNI/stderr.nipype-init).
2025-09-17 07:29:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:29:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/SharpenEPI/sub-05_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/SharpenEPI/sub-05_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/SharpenEPI/sub-05_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:31:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:31:06 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:31:06 | INFO | niworkflows | Generating visual report
2025-09-17 07:31:23 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.026493s.
2025-09-17 07:31:25 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:31:25 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:31:29 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.118121s.
2025-09-17 07:31:31 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/smoothness/mapflow/_smoothness0".
2025-09-17 07:31:31 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:31:31 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.243886s.
2025-09-17 07:31:33 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/outliers/mapflow/_outliers0".
2025-09-17 07:31:33 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:31:34 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.813612s.
2025-09-17 07:31:35 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/gcor/mapflow/_gcor0".
2025-09-17 07:31:35 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:31:36 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.263091s.
2025-09-17 07:31:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/dilated_mask".
2025-09-17 07:31:37 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:31:37 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016954s.
2025-09-17 07:31:39 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:31:39 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:31:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.833169s.
2025-09-17 07:31:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/PlotBrainmask".
2025-09-17 07:31:41 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:31:42 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.300974s.
2025-09-17 07:31:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/post_n4".
2025-09-17 07:31:43 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:31:44 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.727109s.
2025-09-17 07:31:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/EPI2MNI".
2025-09-17 07:31:45 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:31:45 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:32:14 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/EPI2MNI/stderr.nipype-init).
2025-09-17 07:32:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:32:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/SharpenEPI/sub-05_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/SharpenEPI/sub-05_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/SharpenEPI/sub-05_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:33:24 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:33:24 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:33:24 | INFO | niworkflows | Generating visual report
2025-09-17 07:33:40 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 115.426681s.
2025-09-17 07:33:41 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:33:41 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:33:45 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.875466s.
2025-09-17 07:33:47 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/smoothness/mapflow/_smoothness0".
2025-09-17 07:33:47 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:33:47 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.257766s.
2025-09-17 07:33:49 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/outliers/mapflow/_outliers0".
2025-09-17 07:33:49 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:33:50 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.691243s.
2025-09-17 07:33:51 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/gcor/mapflow/_gcor0".
2025-09-17 07:33:51 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:33:52 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.038863s.
2025-09-17 07:33:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/dilated_mask".
2025-09-17 07:33:53 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:33:53 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.021577s.
2025-09-17 07:33:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:33:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:33:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.812939s.
2025-09-17 07:33:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/PlotBrainmask".
2025-09-17 07:33:57 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:33:58 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.259384s.
2025-09-17 07:33:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/post_n4".
2025-09-17 07:33:59 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:34:00 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.716494s.
2025-09-17 07:34:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/EPI2MNI".
2025-09-17 07:34:01 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:34:01 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:34:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:34:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/SharpenEPI/sub-05_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/SharpenEPI/sub-05_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/SharpenEPI/sub-05_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:35:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:35:39 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:35:39 | INFO | niworkflows | Generating visual report
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.543073s.
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.844237s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/smoothness/mapflow/_smoothness0".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.258215s.
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/outliers/mapflow/_outliers0".
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.718646s.
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/gcor/mapflow/_gcor0".
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.052611s.
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/dilated_mask".
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016372s.
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.792205s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/PlotBrainmask".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.259314s.
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/final_masked".
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025152s.
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ResampleSegmentation".
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.042427s.
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_norm".
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004914s.
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/measures/mapflow/_measures0".
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.40528s.
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.021001s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/subtract_mask".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016734s.
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004817s.
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_bmask".
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004708s.
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68d1cb8d2606268134ac630585faee822af640e4/final_masked".
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02518s.
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68d1cb8d2606268134ac630585faee822af640e4/ResampleSegmentation".
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.957633s.
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_norm".
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004683s.
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/measures/mapflow/_measures0".
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.400378s.
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011427s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/subtract_mask".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01655s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004789s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_bmask".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004784s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/final_masked".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026817s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/768d7204d49a459fcdc659f36fb7753e7615a51f/ResampleSegmentation".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.958348s.
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_norm".
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004885s.
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/measures/mapflow/_measures0".
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.44883s.
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015362s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/subtract_mask".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01678s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005304s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_bmask".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004968s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/final_masked".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028853s.
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/81f5525e1d971493ff5c92aecb882673540f9ff7/ResampleSegmentation".
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.017814s.
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_norm".
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.011732s.
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/measures/mapflow/_measures0".
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.453867s.
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022058s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/subtract_mask".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014785s.
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004985s.
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_bmask".
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.007421s.
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/final_masked".
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028825s.
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ResampleSegmentation".
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.995331s.
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_norm".
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004979s.
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/measures/mapflow/_measures0".
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.408972s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011419s.
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/subtract_mask".
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013015s.
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005048s.
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_bmask".
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004836s.
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a88a955c328c80290dbd226ca378b0868923019f/final_masked".
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027698s.
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a88a955c328c80290dbd226ca378b0868923019f/ResampleSegmentation".
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.007322s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_norm".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00467s.
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/measures/mapflow/_measures0".
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.376951s.
2025-09-17 07:37:09 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:09 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:09 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018199s.
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/subtract_mask".
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014138s.
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004692s.
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_bmask".
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004749s.
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/datasink/mapflow/_datasink0".
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000502s.
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:13 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004255s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/parcels".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.023347s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/datasink/mapflow/_datasink0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000399s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68d1cb8d2606268134ac630585faee822af640e4/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004035s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/parcels".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.022833s.
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/datasink/mapflow/_datasink0".
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000407s.
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00414s.
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/parcels".
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021318s.
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/datasink/mapflow/_datasink0".
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000361s.
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003935s.
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/parcels".
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018733s.
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/datasink/mapflow/_datasink0".
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000372s.
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004019s.
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/parcels".
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017037s.
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/datasink/mapflow/_datasink0".
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000363s.
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a88a955c328c80290dbd226ca378b0868923019f/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00489s.
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/parcels".
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015455s.
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.443084s.
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.4394s.
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.163499s.
2025-09-17 07:37:37 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:37 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.98779s.
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:43 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.39201s.
2025-09-17 07:37:45 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:45 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.567616s.
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c60ff69f24f6c2a2d40aec47924fe6654083eba4/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004711s.
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68d1cb8d2606268134ac630585faee822af640e4/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.0048s.
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/768d7204d49a459fcdc659f36fb7753e7615a51f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004809s.
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/81f5525e1d971493ff5c92aecb882673540f9ff7/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004937s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bbc6096b9b5ac91af23fceaa25eedf8df86024aa/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004761s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a88a955c328c80290dbd226ca378b0868923019f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00463s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:54 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.372858s.
2025-09-17 07:37:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:55 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:59 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.395785s.
2025-09-17 07:38:01 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:38:01 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:38:05 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.338621s.
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:38:07 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:38:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:38:09 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.533688s.
2025-09-17 07:38:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:38:11 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:12 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.912822s.
2025-09-17 07:38:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:38:13 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:15 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.534255s.
2025-09-17 07:38:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:38:15 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:38:15 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.230751s.
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:38:17 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.204319s.
2025-09-17 07:38:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:38:23 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 44.280485s.
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:39:09 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:39:11 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.538291s.
2025-09-17 07:39:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:39:11 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:13 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.086839s.
2025-09-17 07:39:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:39:15 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:39:16 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.74744s.
2025-09-17 07:39:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:39:17 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:20 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.440513s.
2025-09-17 07:39:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:39:21 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:39:21 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.041381s.
2025-09-17 07:39:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:39:21 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:39:34 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.629399s.
2025-09-17 07:39:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:39:35 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:37 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.127083s.
2025-09-17 07:39:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:39:39 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:41 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.204092s.
2025-09-17 07:39:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:39:43 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:43 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004355s.
2025-09-17 07:39:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:39:43 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:39:45 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=17.9987)
2025-09-17 07:39:45 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=17.9987)
2025-09-17 07:39:45 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=17.9987)
2025-09-17 07:39:48 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.042381s.
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004302s.
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004514s.
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004415s.
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:49 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004219s.
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject05.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137097..ds..sourcedata..raw..sub-05..anat..sub-05_T1w.nii.gz_metadata_FileSize0.002995705232024193.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:39:50 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000403s.
2025-09-17 07:39:51 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:39:52 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:39:52 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 18s per subject.
2025-09-17 07:39:52 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 44min 08s).
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