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ds000002-mriqc/logs/duct/sub-04_2025.09.17T08.56.57-2163255stdout
Felix Hoffstaedter 912b50dcc3 [DATALAD RUNCMD] Compute MRIQC for sub-04 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-04 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-04",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:41:13 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137083/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:57:00 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:57:00 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:57:00 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:57:00 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-09-17 06:57:00 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065658_d133ac70-b778-47de-b19b-d09943e08a61.toml.
2025-09-17 06:57:05 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:57:06 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:57:06 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:57:07 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:57:12 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:57:16 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.268248s.
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/06a42ce8fd68bafac850b70abc1ff9896dd14578/pick_echo".
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000134s.
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/provenance/mapflow/_provenance0".
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.054575s.
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f5621def0748b5bc4f07f348df29afbd8656af56/pick_echo".
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000107s.
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/provenance/mapflow/_provenance0".
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04733s.
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/90084100152b84208a4be0d82c4ce17b72eb14ad/pick_echo".
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000121s.
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/provenance/mapflow/_provenance0".
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.062183s.
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/pick_echo".
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/provenance/mapflow/_provenance0".
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.060466s.
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/00b1d9608be3893016487136ba831c97b0719f3b/pick_echo".
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000104s.
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/provenance/mapflow/_provenance0".
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.048378s.
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/694b3a0ca5a158edab6da1549f5603f386cc5d21/pick_echo".
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000111s.
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/provenance/mapflow/_provenance0".
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.047642s.
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:40 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.162531s.
2025-09-17 06:57:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:40 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:41 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.632067s.
2025-09-17 06:57:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:42 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:47 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.6588899999999995s.
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/06a42ce8fd68bafac850b70abc1ff9896dd14578/non_steady_state_detector".
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:49 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.178704s.
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f5621def0748b5bc4f07f348df29afbd8656af56/non_steady_state_detector".
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:51 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153508s.
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/90084100152b84208a4be0d82c4ce17b72eb14ad/non_steady_state_detector".
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:53 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153149s.
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/non_steady_state_detector".
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:55 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153189s.
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/00b1d9608be3893016487136ba831c97b0719f3b/non_steady_state_detector".
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:57 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152923s.
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/694b3a0ca5a158edab6da1549f5603f386cc5d21/non_steady_state_detector".
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:59 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152648s.
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:59:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 63.537685s.
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008775s.
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/06a42ce8fd68bafac850b70abc1ff9896dd14578/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:08 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.121283s.
2025-09-17 06:59:09 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f5621def0748b5bc4f07f348df29afbd8656af56/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:09 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:10 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.320854s.
2025-09-17 06:59:11 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/90084100152b84208a4be0d82c4ce17b72eb14ad/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:11 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:12 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.693246s.
2025-09-17 06:59:13 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:13 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:14 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.454298s.
2025-09-17 06:59:15 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/00b1d9608be3893016487136ba831c97b0719f3b/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:15 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:16 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.3473169999999999s.
2025-09-17 06:59:17 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/694b3a0ca5a158edab6da1549f5603f386cc5d21/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:17 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:18 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.366146s.
2025-09-17 06:59:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:59:19 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:00:08 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 49.810364s.
2025-09-17 07:00:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/06a42ce8fd68bafac850b70abc1ff9896dd14578/estimate_hm".
2025-09-17 07:00:09 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:02:11 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.800962s.
2025-09-17 07:02:13 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:02:13 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:02:14 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.28196s.
2025-09-17 07:02:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f5621def0748b5bc4f07f348df29afbd8656af56/estimate_hm".
2025-09-17 07:02:15 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:04:17 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 122.46787s.
2025-09-17 07:04:19 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:04:19 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:04:20 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.254302s.
2025-09-17 07:04:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/90084100152b84208a4be0d82c4ce17b72eb14ad/estimate_hm".
2025-09-17 07:04:21 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:06:58 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 156.925601s.
2025-09-17 07:06:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:06:59 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:07:00 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.308789s.
2025-09-17 07:07:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/estimate_hm".
2025-09-17 07:07:01 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:38 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 156.829337s.
2025-09-17 07:09:39 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:39 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:40 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.349066s.
2025-09-17 07:09:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/00b1d9608be3893016487136ba831c97b0719f3b/estimate_hm".
2025-09-17 07:09:41 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:43 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.986151s.
2025-09-17 07:11:45 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:45 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:46 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.3286609999999999s.
2025-09-17 07:11:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/694b3a0ca5a158edab6da1549f5603f386cc5d21/estimate_hm".
2025-09-17 07:11:47 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:13:48 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 121.184295s.
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.361466s.
2025-09-17 07:13:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:13:51 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:14:06 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.81985s.
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:14:10 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.783341s.
2025-09-17 07:14:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:14:11 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.804755s.
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.642066s.
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/06a42ce8fd68bafac850b70abc1ff9896dd14578/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:28 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.876991s.
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/06a42ce8fd68bafac850b70abc1ff9896dd14578/ComputeFD".
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006555s.
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.419888s.
2025-09-17 07:14:33 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f5621def0748b5bc4f07f348df29afbd8656af56/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:33 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.92477s.
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f5621def0748b5bc4f07f348df29afbd8656af56/ComputeFD".
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002419s.
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.417957s.
2025-09-17 07:14:47 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/90084100152b84208a4be0d82c4ce17b72eb14ad/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:47 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.187799s.
2025-09-17 07:14:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/90084100152b84208a4be0d82c4ce17b72eb14ad/ComputeFD".
2025-09-17 07:14:59 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:59 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006986s.
2025-09-17 07:15:01 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:01 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:02 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.515939s.
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:15:14 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 11.227347s.
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ComputeFD".
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002975s.
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:18 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.494286s.
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/00b1d9608be3893016487136ba831c97b0719f3b/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:15:28 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.778805s.
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/00b1d9608be3893016487136ba831c97b0719f3b/ComputeFD".
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.008006s.
2025-09-17 07:15:31 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:31 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:32 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.418725s.
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/694b3a0ca5a158edab6da1549f5603f386cc5d21/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:15:42 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.012198s.
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/694b3a0ca5a158edab6da1549f5603f386cc5d21/ComputeFD".
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006929s.
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:15:46 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.427464s.
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.249381s.
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:15:50 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:16:54 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/stderr.nipype-init).
2025-09-17 07:16:54 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:16:54 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:17:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:17:09 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:17:09 | INFO | niworkflows | Generating visual report
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 97.099849s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004502s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004424s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/06a42ce8fd68bafac850b70abc1ff9896dd14578/mean/mapflow/_mean0".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.654743s.
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/06a42ce8fd68bafac850b70abc1ff9896dd14578/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.473361s.
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/quality/mapflow/_quality0".
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.2968600000000001s.
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f5621def0748b5bc4f07f348df29afbd8656af56/mean/mapflow/_mean0".
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.558365s.
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f5621def0748b5bc4f07f348df29afbd8656af56/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.454826s.
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/quality/mapflow/_quality0".
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.2465600000000001s.
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/90084100152b84208a4be0d82c4ce17b72eb14ad/mean/mapflow/_mean0".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.669098s.
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/90084100152b84208a4be0d82c4ce17b72eb14ad/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.528564s.
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/quality/mapflow/_quality0".
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.581437s.
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/mean/mapflow/_mean0".
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.710637s.
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/1693c7eeeb1050103b680f1470f1fe4b5117aa46/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.565768s.
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/quality/mapflow/_quality0".
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.5906630000000002s.
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/00b1d9608be3893016487136ba831c97b0719f3b/mean/mapflow/_mean0".
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.591566s.
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/00b1d9608be3893016487136ba831c97b0719f3b/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.465285s.
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/quality/mapflow/_quality0".
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.253372s.
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/694b3a0ca5a158edab6da1549f5603f386cc5d21/mean/mapflow/_mean0".
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.591473s.
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/694b3a0ca5a158edab6da1549f5603f386cc5d21/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.432017s.
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/quality/mapflow/_quality0".
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.255121s.
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004459s.
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/pre_clip".
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.241688s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/SharpenEPI".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5508579999999998s.
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.647698s.
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.789169s.
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.807161s.
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/pre_clip".
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.252876s.
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/SharpenEPI".
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:17 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.709994s.
2025-09-17 07:18:17 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:17 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.702445s.
2025-09-17 07:18:19 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:19 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.852228s.
2025-09-17 07:18:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.868699s.
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/pre_clip".
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:23 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.259639s.
2025-09-17 07:18:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/SharpenEPI".
2025-09-17 07:18:25 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:27 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.766101s.
2025-09-17 07:18:27 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:27 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.726146s.
2025-09-17 07:18:29 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:29 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.877979s.
2025-09-17 07:18:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.908804s.
2025-09-17 07:18:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/pre_clip".
2025-09-17 07:18:33 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:33 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.268814s.
2025-09-17 07:18:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/SharpenEPI".
2025-09-17 07:18:35 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:37 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.738605s.
2025-09-17 07:18:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.697126s.
2025-09-17 07:18:39 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:39 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.919895s.
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.95962s.
2025-09-17 07:18:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/pre_clip".
2025-09-17 07:18:43 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:43 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.29324s.
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/SharpenEPI".
2025-09-17 07:18:45 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.731077s.
2025-09-17 07:18:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.71441s.
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.037277s.
2025-09-17 07:18:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.994939s.
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/pre_clip".
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.266173s.
2025-09-17 07:18:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/SharpenEPI".
2025-09-17 07:18:55 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.7280060000000002s.
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.716297s.
2025-09-17 07:18:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:19:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.953861s.
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:19:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.974488s.
2025-09-17 07:19:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/pre_n4".
2025-09-17 07:19:03 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:19:05 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.83658s.
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005764s.
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005498s.
2025-09-17 07:19:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005357s.
2025-09-17 07:19:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/pre_n4".
2025-09-17 07:19:08 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:19:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.731514s.
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005961s.
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005616s.
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00523s.
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/pre_n4".
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:19:14 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.7845469999999999s.
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005594s.
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005424s.
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005366s.
2025-09-17 07:19:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/pre_n4".
2025-09-17 07:19:16 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:19:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.87451s.
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005654s.
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005541s.
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005614s.
2025-09-17 07:19:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/pre_n4".
2025-09-17 07:19:20 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:19:21 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.7918370000000001s.
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00676s.
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.006235s.
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005408s.
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/pre_n4".
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:19:26 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.7285300000000001s.
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005934s.
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.006356s.
2025-09-17 07:19:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:19:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.006229s.
2025-09-17 07:19:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/synthstrip".
2025-09-17 07:19:28 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:13 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 45.134231s.
2025-09-17 07:20:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/synthstrip".
2025-09-17 07:20:13 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:58 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.947081s.
2025-09-17 07:20:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/synthstrip".
2025-09-17 07:20:59 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:44 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.814522s.
2025-09-17 07:21:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/synthstrip".
2025-09-17 07:21:45 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.42061s.
2025-09-17 07:22:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/synthstrip".
2025-09-17 07:22:31 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:23:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.04085s.
2025-09-17 07:23:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/synthstrip".
2025-09-17 07:23:15 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:23:56 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.581531s.
2025-09-17 07:23:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/post_n4".
2025-09-17 07:23:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:23:58 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.718063s.
2025-09-17 07:23:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/EPI2MNI".
2025-09-17 07:23:59 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:23:59 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:24:27 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:24:27 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/SharpenEPI/sub-04_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/SharpenEPI/sub-04_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/SharpenEPI/sub-04_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:25:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:25:37 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:25:37 | INFO | niworkflows | Generating visual report
2025-09-17 07:25:54 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.911183s.
2025-09-17 07:25:55 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:25:55 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:26:00 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.385724s.
2025-09-17 07:26:01 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/smoothness/mapflow/_smoothness0".
2025-09-17 07:26:01 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:26:02 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.265867s.
2025-09-17 07:26:03 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/outliers/mapflow/_outliers0".
2025-09-17 07:26:03 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:26:04 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.800797s.
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/gcor/mapflow/_gcor0".
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.166121s.
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/dilated_mask".
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015858s.
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:26:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.855449s.
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/PlotBrainmask".
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.301295s.
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/post_n4".
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:26:14 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.728196s.
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/EPI2MNI".
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:26:15 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:26:41 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/EPI2MNI/stderr.nipype-init).
2025-09-17 07:26:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:26:41 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/SharpenEPI/sub-04_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/SharpenEPI/sub-04_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/SharpenEPI/sub-04_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:27:51 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:27:51 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:27:51 | INFO | niworkflows | Generating visual report
2025-09-17 07:28:08 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.417763s.
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:28:14 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.367531s.
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/smoothness/mapflow/_smoothness0".
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.272959s.
2025-09-17 07:28:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/outliers/mapflow/_outliers0".
2025-09-17 07:28:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:28:18 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.766337s.
2025-09-17 07:28:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/gcor/mapflow/_gcor0".
2025-09-17 07:28:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:28:20 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.049907s.
2025-09-17 07:28:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/dilated_mask".
2025-09-17 07:28:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:28:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019881s.
2025-09-17 07:28:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:28:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:28:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.641565s.
2025-09-17 07:28:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/PlotBrainmask".
2025-09-17 07:28:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.302638s.
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/post_n4".
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:28:28 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.759553s.
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/EPI2MNI".
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:28:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:28:57 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:28:57 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/SharpenEPI/sub-04_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/SharpenEPI/sub-04_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/SharpenEPI/sub-04_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:30:03 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:30:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:30:03 | INFO | niworkflows | Generating visual report
2025-09-17 07:30:19 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 110.008309s.
2025-09-17 07:30:21 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:30:21 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:30:26 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.652647s.
2025-09-17 07:30:27 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/smoothness/mapflow/_smoothness0".
2025-09-17 07:30:27 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:30:28 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.278124s.
2025-09-17 07:30:29 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/outliers/mapflow/_outliers0".
2025-09-17 07:30:29 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:30:30 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.89656s.
2025-09-17 07:30:31 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/gcor/mapflow/_gcor0".
2025-09-17 07:30:31 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:30:33 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.266939s.
2025-09-17 07:30:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/dilated_mask".
2025-09-17 07:30:33 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:30:34 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015285s.
2025-09-17 07:30:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:30:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:30:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.640097s.
2025-09-17 07:30:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/PlotBrainmask".
2025-09-17 07:30:37 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:30:39 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.263882s.
2025-09-17 07:30:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/post_n4".
2025-09-17 07:30:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:30:40 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.749303s.
2025-09-17 07:30:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/EPI2MNI".
2025-09-17 07:30:41 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:30:41 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:31:09 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:31:09 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/SharpenEPI/sub-04_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/SharpenEPI/sub-04_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/SharpenEPI/sub-04_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:32:15 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:32:15 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:32:15 | INFO | niworkflows | Generating visual report
2025-09-17 07:32:32 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 110.852381s.
2025-09-17 07:32:34 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:32:34 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:32:38 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.613208s.
2025-09-17 07:32:40 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/smoothness/mapflow/_smoothness0".
2025-09-17 07:32:40 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:32:40 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.279483s.
2025-09-17 07:32:42 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/outliers/mapflow/_outliers0".
2025-09-17 07:32:42 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:32:42 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.913991s.
2025-09-17 07:32:44 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/gcor/mapflow/_gcor0".
2025-09-17 07:32:44 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:32:45 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.26465s.
2025-09-17 07:32:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/dilated_mask".
2025-09-17 07:32:46 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:32:46 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014145s.
2025-09-17 07:32:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:32:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:32:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.6401s.
2025-09-17 07:32:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/PlotBrainmask".
2025-09-17 07:32:50 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:32:51 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.283256s.
2025-09-17 07:32:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/post_n4".
2025-09-17 07:32:52 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:32:52 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.737128s.
2025-09-17 07:32:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/EPI2MNI".
2025-09-17 07:32:54 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:32:54 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:33:23 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/EPI2MNI/stderr.nipype-init).
2025-09-17 07:33:23 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:33:23 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/SharpenEPI/sub-04_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/SharpenEPI/sub-04_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/SharpenEPI/sub-04_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:34:33 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:34:33 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:34:33 | INFO | niworkflows | Generating visual report
2025-09-17 07:34:50 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 116.119187s.
2025-09-17 07:34:52 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:34:52 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:34:56 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.383935s.
2025-09-17 07:34:58 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/smoothness/mapflow/_smoothness0".
2025-09-17 07:34:58 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:34:58 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.278421s.
2025-09-17 07:35:00 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/outliers/mapflow/_outliers0".
2025-09-17 07:35:00 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:35:00 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.745399s.
2025-09-17 07:35:02 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/gcor/mapflow/_gcor0".
2025-09-17 07:35:02 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:35:03 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.050099s.
2025-09-17 07:35:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/dilated_mask".
2025-09-17 07:35:04 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:35:04 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017251s.
2025-09-17 07:35:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:35:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:35:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.635623s.
2025-09-17 07:35:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/PlotBrainmask".
2025-09-17 07:35:08 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:35:09 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.311819s.
2025-09-17 07:35:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/post_n4".
2025-09-17 07:35:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:35:10 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.759937s.
2025-09-17 07:35:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/EPI2MNI".
2025-09-17 07:35:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:35:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:35:42 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/EPI2MNI/stderr.nipype-init).
2025-09-17 07:35:42 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:35:42 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/SharpenEPI/sub-04_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/SharpenEPI/sub-04_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/SharpenEPI/sub-04_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:36:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:36:50 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:36:50 | INFO | niworkflows | Generating visual report
2025-09-17 07:37:07 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 115.850608s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.349057s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/smoothness/mapflow/_smoothness0".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.273117s.
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/outliers/mapflow/_outliers0".
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:37:16 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.755689s.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/gcor/mapflow/_gcor0".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:37:19 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.048043s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/dilated_mask".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.021896s.
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.806295s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/PlotBrainmask".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.374096s.
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/final_masked".
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027866s.
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06a42ce8fd68bafac850b70abc1ff9896dd14578/ResampleSegmentation".
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.060145s.
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_norm".
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004887s.
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/measures/mapflow/_measures0".
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.410805s.
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019434s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/subtract_mask".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016328s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004822s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_bmask".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004662s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f5621def0748b5bc4f07f348df29afbd8656af56/final_masked".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.0349s.
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f5621def0748b5bc4f07f348df29afbd8656af56/ResampleSegmentation".
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:39 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.011032s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_norm".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004893s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/measures/mapflow/_measures0".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.411206s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01578s.
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/subtract_mask".
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:44 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011255s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004837s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_bmask".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004712s.
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/final_masked".
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:46 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023834s.
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/90084100152b84208a4be0d82c4ce17b72eb14ad/ResampleSegmentation".
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:49 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.006942s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_norm".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004918s.
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/measures/mapflow/_measures0".
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:37:50 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.45695s.
2025-09-17 07:37:52 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/timeseries/mapflow/_timeseries0".
2025-09-17 07:37:52 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:37:52 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.02555s.
2025-09-17 07:37:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/subtract_mask".
2025-09-17 07:37:54 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:37:54 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016093s.
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005057s.
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_bmask".
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004909s.
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/final_masked".
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:56 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028518s.
2025-09-17 07:37:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ResampleSegmentation".
2025-09-17 07:37:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:37:59 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.018225s.
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_norm".
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004704s.
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/measures/mapflow/_measures0".
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:38:00 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.473096s.
2025-09-17 07:38:02 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/timeseries/mapflow/_timeseries0".
2025-09-17 07:38:02 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:38:02 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016073s.
2025-09-17 07:38:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/subtract_mask".
2025-09-17 07:38:04 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:38:04 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014612s.
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005096s.
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_bmask".
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004721s.
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/00b1d9608be3893016487136ba831c97b0719f3b/final_masked".
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:38:06 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026838s.
2025-09-17 07:38:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/00b1d9608be3893016487136ba831c97b0719f3b/ResampleSegmentation".
2025-09-17 07:38:08 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:38:09 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.016165s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_norm".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004799s.
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/measures/mapflow/_measures0".
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:38:10 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.40905s.
2025-09-17 07:38:12 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/timeseries/mapflow/_timeseries0".
2025-09-17 07:38:12 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:38:12 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014245s.
2025-09-17 07:38:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/subtract_mask".
2025-09-17 07:38:14 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:38:14 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014252s.
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004762s.
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_bmask".
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004753s.
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/final_masked".
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:38:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02718s.
2025-09-17 07:38:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/694b3a0ca5a158edab6da1549f5603f386cc5d21/ResampleSegmentation".
2025-09-17 07:38:18 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:38:19 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.005844s.
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_norm".
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005159s.
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/measures/mapflow/_measures0".
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:38:20 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.377854s.
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/timeseries/mapflow/_timeseries0".
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:38:22 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.0195s.
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/subtract_mask".
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016814s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004985s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_bmask".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004751s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/datasink/mapflow/_datasink0".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000487s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004181s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/parcels".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019904s.
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/datasink/mapflow/_datasink0".
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000392s.
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f5621def0748b5bc4f07f348df29afbd8656af56/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004127s.
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/parcels".
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.023004s.
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/datasink/mapflow/_datasink0".
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000394s.
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004215s.
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/parcels".
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020346s.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/datasink/mapflow/_datasink0".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000398s.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004473s.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/parcels".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020386s.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/datasink/mapflow/_datasink0".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000446s.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/00b1d9608be3893016487136ba831c97b0719f3b/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00411s.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/parcels".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017416s.
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/datasink/mapflow/_datasink0".
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000393s.
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004213s.
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/parcels".
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:38:36 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015235s.
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.548081s.
2025-09-17 07:38:42 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:42 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:44 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.45534s.
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:49 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.274367s.
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:53 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.082182s.
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:38:56 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.449121s.
2025-09-17 07:38:58 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:38:58 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.6565339999999997s.
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06a42ce8fd68bafac850b70abc1ff9896dd14578/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00594s.
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f5621def0748b5bc4f07f348df29afbd8656af56/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004927s.
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/90084100152b84208a4be0d82c4ce17b72eb14ad/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004899s.
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1693c7eeeb1050103b680f1470f1fe4b5117aa46/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005101s.
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/00b1d9608be3893016487136ba831c97b0719f3b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005108s.
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/694b3a0ca5a158edab6da1549f5603f386cc5d21/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004828s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:39:08 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.992334s.
2025-09-17 07:39:10 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:39:10 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:39:15 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 5.032302s.
2025-09-17 07:39:16 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:39:16 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:39:21 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 5.032583s.
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:39:22 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:39:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:39:24 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:39:24 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.611388s.
2025-09-17 07:39:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:39:26 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:39:27 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.011081s.
2025-09-17 07:39:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:39:28 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:39:29 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.5969060000000002s.
2025-09-17 07:39:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:39:30 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:39:30 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.252936s.
2025-09-17 07:39:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:39:32 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:39:37 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.105868s.
2025-09-17 07:39:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:39:38 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:40:27 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 49.423833s.
2025-09-17 07:40:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:40:28 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:40:29 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.472626s.
2025-09-17 07:40:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:40:30 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:32 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.102747s.
2025-09-17 07:40:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:40:34 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:40:34 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.751283s.
2025-09-17 07:40:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:40:36 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:38 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.39853s.
2025-09-17 07:40:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:40:40 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:40:40 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.040772s.
2025-09-17 07:40:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:40:40 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:40:52 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.31044s.
2025-09-17 07:40:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:40:54 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:40:56 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.0538s.
2025-09-17 07:40:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:40:58 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:41:00 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.085379s.
2025-09-17 07:41:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:41:02 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:41:02 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004412s.
2025-09-17 07:41:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:41:02 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:41:04 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=41.7535)
2025-09-17 07:41:04 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=41.7535)
2025-09-17 07:41:04 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=41.7535)
2025-09-17 07:41:07 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.731384s.
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004387s.
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004247s.
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004271s.
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004216s.
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject04.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137083..ds..sourcedata..raw..sub-04..anat..sub-04_T1w.nii.gz_metadata_FileSize0.0032628951594233513.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:41:08 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000416s.
2025-09-17 07:41:10 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:41:11 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:41:11 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 18s per subject.
2025-09-17 07:41:11 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 44min 12s).
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