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ds000002-mriqc/logs/duct/sub-03_2025.09.17T08.56.52-2162948stdout
Felix Hoffstaedter 43d9e8773f [DATALAD RUNCMD] Compute MRIQC for sub-03 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-03 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-03",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:39:24 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137081/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:56:55 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:56:55 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:56:55 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:56:55 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.02 GB [maximum|average].
2025-09-17 06:56:55 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065653_4b30bfa1-a8e1-4353-a52c-9212f51c16ae.toml.
2025-09-17 06:57:00 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:57:01 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:57:01 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:57:02 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:57:06 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:57:11 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:57:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:57:11 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:57:11 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.25881s.
2025-09-17 06:57:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/pick_echo".
2025-09-17 06:57:13 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:13 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000135s.
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/provenance/mapflow/_provenance0".
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.039776s.
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/pick_echo".
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:15 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/provenance/mapflow/_provenance0".
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.03978s.
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f7a2188bff1678874350c48508095397882c09c7/pick_echo".
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:17 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/provenance/mapflow/_provenance0".
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.052204s.
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/pick_echo".
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000115s.
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/provenance/mapflow/_provenance0".
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.052649s.
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/efc796348a318b7703de60afc9cd40b37c627ffd/pick_echo".
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00011s.
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/provenance/mapflow/_provenance0".
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.039337s.
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/pick_echo".
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/provenance/mapflow/_provenance0".
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.041221s.
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.251037s.
2025-09-17 06:57:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:35 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:36 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.618053s.
2025-09-17 06:57:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:37 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:42 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.654562s.
2025-09-17 06:57:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/non_steady_state_detector".
2025-09-17 06:57:43 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:43 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.156195s.
2025-09-17 06:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/non_steady_state_detector".
2025-09-17 06:57:45 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:45 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.156629s.
2025-09-17 06:57:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f7a2188bff1678874350c48508095397882c09c7/non_steady_state_detector".
2025-09-17 06:57:47 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:47 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.155967s.
2025-09-17 06:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/non_steady_state_detector".
2025-09-17 06:57:49 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:49 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.155759s.
2025-09-17 06:57:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/efc796348a318b7703de60afc9cd40b37c627ffd/non_steady_state_detector".
2025-09-17 06:57:51 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:51 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.155726s.
2025-09-17 06:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/non_steady_state_detector".
2025-09-17 06:57:53 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:53 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.179069s.
2025-09-17 06:57:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:57:55 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:58:59 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 63.527775s.
2025-09-17 06:59:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:59:01 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:59:01 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008582s.
2025-09-17 06:59:01 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:01 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:02 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.961761s.
2025-09-17 06:59:03 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:03 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:04 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.167467s.
2025-09-17 06:59:05 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f7a2188bff1678874350c48508095397882c09c7/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:05 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.496026s.
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:09 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.463703s.
2025-09-17 06:59:09 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/efc796348a318b7703de60afc9cd40b37c627ffd/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:09 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:10 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.12742s.
2025-09-17 06:59:11 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:11 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:12 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.132609s.
2025-09-17 06:59:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:59:13 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:00:03 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 50.124439s.
2025-09-17 07:00:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/estimate_hm".
2025-09-17 07:00:05 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:02:00 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 114.700752s.
2025-09-17 07:02:01 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:02:01 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:02:03 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.256777s.
2025-09-17 07:02:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/estimate_hm".
2025-09-17 07:02:03 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:59 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 115.380177s.
2025-09-17 07:03:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:59 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:04:01 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.247213s.
2025-09-17 07:04:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f7a2188bff1678874350c48508095397882c09c7/estimate_hm".
2025-09-17 07:04:01 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:06:35 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 154.113543s.
2025-09-17 07:06:37 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:06:37 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:06:39 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.273655s.
2025-09-17 07:06:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/estimate_hm".
2025-09-17 07:06:39 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:12 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 152.31849s.
2025-09-17 07:09:13 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:13 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:15 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.31515s.
2025-09-17 07:09:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/efc796348a318b7703de60afc9cd40b37c627ffd/estimate_hm".
2025-09-17 07:09:15 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:09 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 114.034413s.
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.217929s.
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/estimate_hm".
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:13:09 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 115.200491s.
2025-09-17 07:13:10 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:13:10 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:11 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.257726s.
2025-09-17 07:13:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:13:12 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.573833s.
2025-09-17 07:13:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:13:28 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.747897s.
2025-09-17 07:13:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:13:32 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.923898s.
2025-09-17 07:13:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:13:38 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:13:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.66412s.
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.432245s.
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ComputeFD".
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002512s.
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.347111s.
2025-09-17 07:13:54 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:54 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.211942s.
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ComputeFD".
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:02 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005736s.
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.335866s.
2025-09-17 07:14:06 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f7a2188bff1678874350c48508095397882c09c7/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:06 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.417928s.
2025-09-17 07:14:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f7a2188bff1678874350c48508095397882c09c7/ComputeFD".
2025-09-17 07:14:16 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:16 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005072s.
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.427079s.
2025-09-17 07:14:20 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:20 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.573549s.
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ComputeFD".
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006146s.
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.43985s.
2025-09-17 07:14:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/efc796348a318b7703de60afc9cd40b37c627ffd/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:41 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.375941s.
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/efc796348a318b7703de60afc9cd40b37c627ffd/ComputeFD".
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00544s.
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.339591s.
2025-09-17 07:14:46 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:46 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.235531s.
2025-09-17 07:14:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ComputeFD".
2025-09-17 07:14:54 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:54 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002373s.
2025-09-17 07:14:56 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:56 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:56 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.3428s.
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.243517s.
2025-09-17 07:15:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:15:00 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:15:00 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:16:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:16:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:16:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:16:18 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:16:18 | INFO | niworkflows | Generating visual report
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 95.685633s.
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.00496s.
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00461s.
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/mean/mapflow/_mean0".
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.572724s.
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.425282s.
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/quality/mapflow/_quality0".
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:41 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.14953s.
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/mean/mapflow/_mean0".
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.535844s.
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/8d5df705f450f04867bbd9bb6a36f0339f00c37d/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.42994s.
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/quality/mapflow/_quality0".
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.102748s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f7a2188bff1678874350c48508095397882c09c7/mean/mapflow/_mean0".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.649483s.
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f7a2188bff1678874350c48508095397882c09c7/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.476228s.
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/quality/mapflow/_quality0".
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.420795s.
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/mean/mapflow/_mean0".
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.631541s.
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/47a322bf6a63982f5299feaf9c2d58bf52df4bee/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.488611s.
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/quality/mapflow/_quality0".
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.4108260000000001s.
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/efc796348a318b7703de60afc9cd40b37c627ffd/mean/mapflow/_mean0".
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.51271s.
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/efc796348a318b7703de60afc9cd40b37c627ffd/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.421422s.
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/quality/mapflow/_quality0".
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.083925s.
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/mean/mapflow/_mean0".
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.530395s.
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.42548s.
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/quality/mapflow/_quality0".
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.125239s.
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004677s.
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/pre_clip".
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.200354s.
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/SharpenEPI".
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.380713s.
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.66698s.
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.857589s.
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.884249s.
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/pre_clip".
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.205815s.
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/SharpenEPI".
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:25 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.4296389999999999s.
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.634695s.
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.834431s.
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.79534s.
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/pre_clip".
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.239941s.
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/SharpenEPI".
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.461196s.
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.650044s.
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.828694s.
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.811436s.
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/pre_clip".
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.214517s.
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/SharpenEPI".
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.4746299999999999s.
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.660131s.
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.820128s.
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.841302s.
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/pre_clip".
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.216265s.
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/SharpenEPI".
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.461436s.
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.639171s.
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.793353s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.822019s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/pre_clip".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.244525s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/SharpenEPI".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.510923s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.661644s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.830531s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.881867s.
2025-09-17 07:18:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/pre_n4".
2025-09-17 07:18:12 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:13 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.513588s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005059s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004884s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004881s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/pre_n4".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.428892s.
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005118s.
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005253s.
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004919s.
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/pre_n4".
2025-09-17 07:18:16 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.438864s.
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004998s.
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00501s.
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004904s.
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/pre_n4".
2025-09-17 07:18:20 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.406119s.
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004991s.
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005007s.
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005542s.
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/pre_n4".
2025-09-17 07:18:22 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:24 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4553479999999999s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005122s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.015218s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005068s.
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/pre_n4".
2025-09-17 07:18:26 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.427359s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005264s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005122s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00715s.
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/synthstrip".
2025-09-17 07:18:30 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 41.140002s.
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/synthstrip".
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:57 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 45.098799s.
2025-09-17 07:19:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/synthstrip".
2025-09-17 07:19:58 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:42 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.159804s.
2025-09-17 07:20:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/synthstrip".
2025-09-17 07:20:44 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:28 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.3268s.
2025-09-17 07:21:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/synthstrip".
2025-09-17 07:21:30 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.067258s.
2025-09-17 07:22:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/synthstrip".
2025-09-17 07:22:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:59 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.259597s.
2025-09-17 07:23:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/post_n4".
2025-09-17 07:23:00 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:23:01 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.786612s.
2025-09-17 07:23:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/EPI2MNI".
2025-09-17 07:23:02 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:23:02 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:23:28 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/EPI2MNI/stderr.nipype-init).
2025-09-17 07:23:28 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:23:28 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/SharpenEPI/sub-03_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/SharpenEPI/sub-03_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/SharpenEPI/sub-03_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:24:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:24:37 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:24:37 | INFO | niworkflows | Generating visual report
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.953141s.
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:25:00 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.851294s.
2025-09-17 07:25:00 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/smoothness/mapflow/_smoothness0".
2025-09-17 07:25:00 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:25:00 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.260772s.
2025-09-17 07:25:02 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/outliers/mapflow/_outliers0".
2025-09-17 07:25:02 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:25:03 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.734741s.
2025-09-17 07:25:04 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/gcor/mapflow/_gcor0".
2025-09-17 07:25:04 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:25:05 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.040741s.
2025-09-17 07:25:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/dilated_mask".
2025-09-17 07:25:06 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:25:06 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017276s.
2025-09-17 07:25:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:25:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:25:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.818571s.
2025-09-17 07:25:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/PlotBrainmask".
2025-09-17 07:25:10 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:25:11 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.413537s.
2025-09-17 07:25:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/post_n4".
2025-09-17 07:25:12 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:25:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.724621s.
2025-09-17 07:25:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/EPI2MNI".
2025-09-17 07:25:14 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:25:14 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:25:36 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/EPI2MNI/stderr.nipype-init).
2025-09-17 07:25:36 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:25:36 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/SharpenEPI/sub-03_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/SharpenEPI/sub-03_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/SharpenEPI/sub-03_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:26:44 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:26:44 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:26:44 | INFO | niworkflows | Generating visual report
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 106.799628s.
2025-09-17 07:27:02 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:27:02 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:27:06 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.802165s.
2025-09-17 07:27:06 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/smoothness/mapflow/_smoothness0".
2025-09-17 07:27:06 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:27:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.257001s.
2025-09-17 07:27:08 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/outliers/mapflow/_outliers0".
2025-09-17 07:27:08 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:27:09 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.705785s.
2025-09-17 07:27:10 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/gcor/mapflow/_gcor0".
2025-09-17 07:27:10 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:27:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.918428s.
2025-09-17 07:27:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/dilated_mask".
2025-09-17 07:27:12 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:27:12 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017543s.
2025-09-17 07:27:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:27:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:27:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.786652s.
2025-09-17 07:27:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/PlotBrainmask".
2025-09-17 07:27:16 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.269341s.
2025-09-17 07:27:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/post_n4".
2025-09-17 07:27:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:27:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.694995s.
2025-09-17 07:27:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/EPI2MNI".
2025-09-17 07:27:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:27:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:27:44 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/EPI2MNI/stderr.nipype-init).
2025-09-17 07:27:44 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:27:44 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/SharpenEPI/sub-03_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/SharpenEPI/sub-03_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/SharpenEPI/sub-03_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:28:53 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:28:53 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:28:53 | INFO | niworkflows | Generating visual report
2025-09-17 07:29:10 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 109.65625s.
2025-09-17 07:29:10 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:29:10 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:29:14 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.90861s.
2025-09-17 07:29:16 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/smoothness/mapflow/_smoothness0".
2025-09-17 07:29:16 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:29:16 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.246548s.
2025-09-17 07:29:18 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/outliers/mapflow/_outliers0".
2025-09-17 07:29:18 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:29:19 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.813244s.
2025-09-17 07:29:20 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/gcor/mapflow/_gcor0".
2025-09-17 07:29:20 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:29:21 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.122095s.
2025-09-17 07:29:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/dilated_mask".
2025-09-17 07:29:22 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:29:22 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018283s.
2025-09-17 07:29:24 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:29:24 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:29:25 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.647808s.
2025-09-17 07:29:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/PlotBrainmask".
2025-09-17 07:29:26 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:29:27 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.293842s.
2025-09-17 07:29:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/post_n4".
2025-09-17 07:29:28 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:29:29 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.698013s.
2025-09-17 07:29:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/EPI2MNI".
2025-09-17 07:29:30 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:29:30 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:29:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/EPI2MNI/stderr.nipype-init).
2025-09-17 07:29:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:29:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/SharpenEPI/sub-03_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/SharpenEPI/sub-03_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/SharpenEPI/sub-03_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:31:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:31:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:31:01 | INFO | niworkflows | Generating visual report
2025-09-17 07:31:18 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 107.726301s.
2025-09-17 07:31:18 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:31:18 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:31:22 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.8633189999999997s.
2025-09-17 07:31:24 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/smoothness/mapflow/_smoothness0".
2025-09-17 07:31:24 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:31:24 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.252504s.
2025-09-17 07:31:26 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/outliers/mapflow/_outliers0".
2025-09-17 07:31:26 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:31:27 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.820151s.
2025-09-17 07:31:28 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/gcor/mapflow/_gcor0".
2025-09-17 07:31:28 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:31:29 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.106598s.
2025-09-17 07:31:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/dilated_mask".
2025-09-17 07:31:30 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:31:30 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01615s.
2025-09-17 07:31:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:31:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:31:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.82483s.
2025-09-17 07:31:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/PlotBrainmask".
2025-09-17 07:31:34 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:31:35 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.274718s.
2025-09-17 07:31:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/post_n4".
2025-09-17 07:31:36 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:31:37 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.728272s.
2025-09-17 07:31:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/EPI2MNI".
2025-09-17 07:31:38 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:31:38 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:32:01 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/EPI2MNI/stderr.nipype-init).
2025-09-17 07:32:01 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:32:01 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/SharpenEPI/sub-03_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/SharpenEPI/sub-03_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/SharpenEPI/sub-03_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:33:10 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:33:10 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:33:10 | INFO | niworkflows | Generating visual report
2025-09-17 07:33:27 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 108.732752s.
2025-09-17 07:33:28 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:33:28 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:33:32 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.8325709999999997s.
2025-09-17 07:33:32 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/smoothness/mapflow/_smoothness0".
2025-09-17 07:33:32 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:33:33 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.255763s.
2025-09-17 07:33:34 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/outliers/mapflow/_outliers0".
2025-09-17 07:33:34 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:33:35 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.681157s.
2025-09-17 07:33:36 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/gcor/mapflow/_gcor0".
2025-09-17 07:33:36 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:33:37 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.912486s.
2025-09-17 07:33:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/dilated_mask".
2025-09-17 07:33:38 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:33:38 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014305s.
2025-09-17 07:33:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:33:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:33:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.807043s.
2025-09-17 07:33:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/PlotBrainmask".
2025-09-17 07:33:42 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:33:44 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.23368s.
2025-09-17 07:33:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/post_n4".
2025-09-17 07:33:44 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:33:45 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.725606s.
2025-09-17 07:33:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/EPI2MNI".
2025-09-17 07:33:46 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:33:46 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:34:10 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/EPI2MNI/stderr.nipype-init).
2025-09-17 07:34:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:34:10 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/SharpenEPI/sub-03_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/SharpenEPI/sub-03_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/SharpenEPI/sub-03_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:35:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:35:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:35:17 | INFO | niworkflows | Generating visual report
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 107.573493s.
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.837732s.
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/smoothness/mapflow/_smoothness0".
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.304887s.
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/outliers/mapflow/_outliers0".
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.712987s.
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/gcor/mapflow/_gcor0".
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:35:43 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.935625s.
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/dilated_mask".
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017165s.
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.813468s.
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/PlotBrainmask".
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.237394s.
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/final_masked".
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021809s.
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ResampleSegmentation".
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.966006s.
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_norm".
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004957s.
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/measures/mapflow/_measures0".
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.353361s.
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.024451s.
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/subtract_mask".
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.020019s.
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004947s.
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_bmask".
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00484s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/final_masked".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027617s.
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ResampleSegmentation".
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.943658s.
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_norm".
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004895s.
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/measures/mapflow/_measures0".
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.345073s.
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.023103s.
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/subtract_mask".
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016202s.
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00482s.
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_bmask".
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004725s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f7a2188bff1678874350c48508095397882c09c7/final_masked".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.035028s.
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f7a2188bff1678874350c48508095397882c09c7/ResampleSegmentation".
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.947862s.
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_norm".
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004748s.
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/measures/mapflow/_measures0".
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.437145s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.023007s.
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/subtract_mask".
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013314s.
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005532s.
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_bmask".
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004812s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/final_masked".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026841s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ResampleSegmentation".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.897475s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_norm".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004797s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/measures/mapflow/_measures0".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.40406s.
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016358s.
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/subtract_mask".
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.017018s.
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00489s.
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_bmask".
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004762s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/efc796348a318b7703de60afc9cd40b37c627ffd/final_masked".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02293s.
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/efc796348a318b7703de60afc9cd40b37c627ffd/ResampleSegmentation".
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.931108s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_norm".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004757s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/measures/mapflow/_measures0".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.332866s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019469s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/subtract_mask".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01128s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004802s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_bmask".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00486s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/final_masked".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023045s.
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ResampleSegmentation".
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.940044s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_norm".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004765s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/measures/mapflow/_measures0".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.361285s.
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017521s.
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/subtract_mask".
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011063s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004678s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_bmask".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004699s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/datasink/mapflow/_datasink0".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000509s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004307s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/parcels".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.023039s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/datasink/mapflow/_datasink0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000385s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004076s.
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/parcels".
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.022302s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/datasink/mapflow/_datasink0".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000398s.
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f7a2188bff1678874350c48508095397882c09c7/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004079s.
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/parcels".
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021703s.
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/datasink/mapflow/_datasink0".
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000371s.
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00415s.
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/parcels".
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019174s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/datasink/mapflow/_datasink0".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000357s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/efc796348a318b7703de60afc9cd40b37c627ffd/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004072s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/parcels".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015995s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/datasink/mapflow/_datasink0".
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000375s.
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004442s.
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/parcels".
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014131s.
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.390396s.
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.3259319999999999s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.691421s.
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:08 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.606242s.
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.356685s.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.5243449999999998s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/daf8c5ba29fc8686ab72999fe0a03fff01a8b2ef/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004672s.
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8d5df705f450f04867bbd9bb6a36f0339f00c37d/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004699s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f7a2188bff1678874350c48508095397882c09c7/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004711s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/47a322bf6a63982f5299feaf9c2d58bf52df4bee/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004636s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/efc796348a318b7703de60afc9cd40b37c627ffd/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004734s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/806b94f2acc94bd28c6fb59abd2e43cfc53f09b2/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004473s.
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.770174s.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.8476420000000005s.
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.7914639999999995s.
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:37:32 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:35 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.610321s.
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:37:36 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:37 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.977735s.
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.6194009999999999s.
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:37:40 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:41 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.234735s.
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:37:42 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:47 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.119538s.
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:37:48 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:38:37 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 48.287067s.
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.5263529999999998s.
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:38:40 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:43 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.176407s.
2025-09-17 07:38:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:38:44 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:38:45 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.740116s.
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:38:46 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:49 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.55721s.
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.04358s.
2025-09-17 07:38:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:38:51 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.780241s.
2025-09-17 07:39:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:39:04 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.204603s.
2025-09-17 07:39:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:39:08 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:39:11 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.288835s.
2025-09-17 07:39:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:39:12 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:12 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004378s.
2025-09-17 07:39:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:39:13 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:39:15 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=41.4323)
2025-09-17 07:39:15 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=41.4323)
2025-09-17 07:39:15 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=41.4323)
2025-09-17 07:39:18 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.294162s.
2025-09-17 07:39:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:39:18 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:18 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004306s.
2025-09-17 07:39:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:39:18 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004393s.
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004268s.
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004326s.
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject03.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137081..ds..sourcedata..raw..sub-03..anat..sub-03_T1w.nii.gz_metadata_FileSize0.003318645991384983.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:39:19 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000411s.
2025-09-17 07:39:20 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:39:22 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:39:22 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 04s per subject.
2025-09-17 07:39:22 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 42min 29s).
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