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ds000002-mriqc/logs/duct/sub-02_2025.09.17T08.56.57-2163164stdout
Felix Hoffstaedter 37c27d9e5e [DATALAD RUNCMD] Compute MRIQC for sub-02 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-02 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-02",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:39:08 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137099/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:56:59 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:56:59 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:56:59 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:56:59 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.02 GB [maximum|average].
2025-09-17 06:56:59 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065658_b1022504-fc54-455c-a298-44015410ebb2.toml.
2025-09-17 06:57:04 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:57:05 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:57:06 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:57:06 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:57:11 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:57:15 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:57:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:57:16 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:57:16 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.27512s.
2025-09-17 06:57:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/pick_echo".
2025-09-17 06:57:18 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:18 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000168s.
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/provenance/mapflow/_provenance0".
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.038971s.
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/d122b47d87a82fc320eb7805206889a059d23191/pick_echo".
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/provenance/mapflow/_provenance0".
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.03883s.
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/pick_echo".
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:22 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000106s.
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/provenance/mapflow/_provenance0".
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.050945s.
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c16b00736baea0e19ecf04f0d3e81317103aeb95/pick_echo".
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:24 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000105s.
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/provenance/mapflow/_provenance0".
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.050925s.
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/987f4ce718c1f278e6ca6b22356c7e29d144596b/pick_echo".
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000105s.
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/provenance/mapflow/_provenance0".
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.038424s.
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/pick_echo".
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000107s.
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/provenance/mapflow/_provenance0".
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.038469s.
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:38 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.611485s.
2025-09-17 06:57:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:40 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:40 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.759738s.
2025-09-17 06:57:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:42 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:46 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.701578s.
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/non_steady_state_detector".
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152494s.
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/d122b47d87a82fc320eb7805206889a059d23191/non_steady_state_detector".
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151549s.
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/non_steady_state_detector".
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.150247s.
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c16b00736baea0e19ecf04f0d3e81317103aeb95/non_steady_state_detector".
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:54 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151814s.
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/987f4ce718c1f278e6ca6b22356c7e29d144596b/non_steady_state_detector".
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:56 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.150446s.
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/non_steady_state_detector".
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:58 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151319s.
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:58:00 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:59:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 63.537558s.
2025-09-17 06:59:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:59:06 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:59:06 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008499s.
2025-09-17 06:59:06 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:06 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:07 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.068562s.
2025-09-17 06:59:08 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/d122b47d87a82fc320eb7805206889a059d23191/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:08 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:09 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.081438s.
2025-09-17 06:59:10 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:10 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:11 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.403745s.
2025-09-17 06:59:12 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c16b00736baea0e19ecf04f0d3e81317103aeb95/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:12 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:13 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.438174s.
2025-09-17 06:59:14 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/987f4ce718c1f278e6ca6b22356c7e29d144596b/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:14 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:15 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.930123s.
2025-09-17 06:59:16 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:16 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:17 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.945719s.
2025-09-17 06:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:59:18 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:00:07 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 49.135334s.
2025-09-17 07:00:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/estimate_hm".
2025-09-17 07:00:08 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:02:01 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.251631s.
2025-09-17 07:02:02 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:02:02 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:02:03 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.230794s.
2025-09-17 07:02:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d122b47d87a82fc320eb7805206889a059d23191/estimate_hm".
2025-09-17 07:02:04 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:57 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.680555s.
2025-09-17 07:03:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:58 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:03:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.230547s.
2025-09-17 07:04:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/estimate_hm".
2025-09-17 07:04:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:06:30 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 150.208534s.
2025-09-17 07:06:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:06:32 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:06:33 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.276926s.
2025-09-17 07:06:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c16b00736baea0e19ecf04f0d3e81317103aeb95/estimate_hm".
2025-09-17 07:06:34 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:09:05 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 151.172769s.
2025-09-17 07:09:06 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:09:06 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:09:07 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.277167s.
2025-09-17 07:09:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/987f4ce718c1f278e6ca6b22356c7e29d144596b/estimate_hm".
2025-09-17 07:09:08 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:03 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 114.708673s.
2025-09-17 07:11:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:04 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:05 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.225608s.
2025-09-17 07:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/estimate_hm".
2025-09-17 07:11:06 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:13:01 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 114.57443s.
2025-09-17 07:13:02 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:13:02 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:03 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.265913s.
2025-09-17 07:13:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:13:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:13:17 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 13.287385s.
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:13:20 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.33722s.
2025-09-17 07:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:13:22 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.667923s.
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:13:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.635618s.
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:30 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:37 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.164408s.
2025-09-17 07:13:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ComputeFD".
2025-09-17 07:13:38 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:38 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002603s.
2025-09-17 07:13:40 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:40 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:40 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.338959s.
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d122b47d87a82fc320eb7805206889a059d23191/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:42 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.324578s.
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d122b47d87a82fc320eb7805206889a059d23191/ComputeFD".
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002419s.
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:52 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.327028s.
2025-09-17 07:13:54 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:54 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:03 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.412001s.
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ComputeFD".
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.007145s.
2025-09-17 07:14:06 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:06 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:07 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.415243s.
2025-09-17 07:14:08 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c16b00736baea0e19ecf04f0d3e81317103aeb95/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:08 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:17 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.38574s.
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c16b00736baea0e19ecf04f0d3e81317103aeb95/ComputeFD".
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.007862s.
2025-09-17 07:14:20 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:20 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:21 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.4346s.
2025-09-17 07:14:22 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/987f4ce718c1f278e6ca6b22356c7e29d144596b/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:22 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.295177s.
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/987f4ce718c1f278e6ca6b22356c7e29d144596b/ComputeFD".
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002513s.
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:32 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.339641s.
2025-09-17 07:14:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.389233s.
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ComputeFD".
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002679s.
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.389143s.
2025-09-17 07:14:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:14:46 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:14:46 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.236746s.
2025-09-17 07:14:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:14:48 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:14:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:15:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:15:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:16:04 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:16:05 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:16:05 | INFO | niworkflows | Generating visual report
2025-09-17 07:16:23 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 94.470485s.
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.00489s.
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005013s.
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/mean/mapflow/_mean0".
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.545727s.
2025-09-17 07:16:26 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:26 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.412521s.
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/quality/mapflow/_quality0".
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:29 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.099732s.
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/d122b47d87a82fc320eb7805206889a059d23191/mean/mapflow/_mean0".
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.534046s.
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/d122b47d87a82fc320eb7805206889a059d23191/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:32 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.429308s.
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/quality/mapflow/_quality0".
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.081449s.
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/mean/mapflow/_mean0".
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.644047s.
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:38 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.500863s.
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/quality/mapflow/_quality0".
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.335919s.
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c16b00736baea0e19ecf04f0d3e81317103aeb95/mean/mapflow/_mean0".
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.599494s.
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c16b00736baea0e19ecf04f0d3e81317103aeb95/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:44 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.477152s.
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/quality/mapflow/_quality0".
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.338479s.
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/987f4ce718c1f278e6ca6b22356c7e29d144596b/mean/mapflow/_mean0".
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.503674s.
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/987f4ce718c1f278e6ca6b22356c7e29d144596b/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:50 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.386294s.
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/quality/mapflow/_quality0".
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.072179s.
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/mean/mapflow/_mean0".
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:55 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.502436s.
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:56 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.422682s.
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/quality/mapflow/_quality0".
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.056462s.
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004597s.
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/pre_clip".
2025-09-17 07:17:00 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.229523s.
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/SharpenEPI".
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.353974s.
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.659402s.
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.916484s.
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.890184s.
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/pre_clip".
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.20922s.
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/SharpenEPI".
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.4374069999999999s.
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.656522s.
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.898796s.
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.87194s.
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/pre_clip".
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.215175s.
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/SharpenEPI".
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.439214s.
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:25 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.684578s.
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.897483s.
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.905082s.
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/pre_clip".
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:30 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.217004s.
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/SharpenEPI".
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.406386s.
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.680219s.
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.897415s.
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.922837s.
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/pre_clip".
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:40 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.216275s.
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/SharpenEPI".
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.434911s.
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.71028s.
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.83197s.
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.86802s.
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/pre_clip".
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:50 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.248766s.
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/SharpenEPI".
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.456537s.
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.679554s.
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.927631s.
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.868432s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/pre_n4".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.427822s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005416s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005407s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004833s.
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/pre_n4".
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.398567s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004921s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005011s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005212s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/pre_n4".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.3890959999999999s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005154s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005183s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005024s.
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/pre_n4".
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.397383s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005016s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005301s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005053s.
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/pre_n4".
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.389501s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005211s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005037s.
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004975s.
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/pre_n4".
2025-09-17 07:18:11 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:12 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.3998650000000001s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005151s.
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005519s.
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005076s.
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/synthstrip".
2025-09-17 07:18:15 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:55 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.530244s.
2025-09-17 07:18:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/synthstrip".
2025-09-17 07:18:56 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:39 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 42.85275s.
2025-09-17 07:19:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/synthstrip".
2025-09-17 07:19:40 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.854376s.
2025-09-17 07:20:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/synthstrip".
2025-09-17 07:20:24 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.205847s.
2025-09-17 07:21:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/synthstrip".
2025-09-17 07:21:10 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:54 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.928503s.
2025-09-17 07:21:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/synthstrip".
2025-09-17 07:21:56 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:40 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.486649s.
2025-09-17 07:22:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/post_n4".
2025-09-17 07:22:40 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:22:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.762258s.
2025-09-17 07:22:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/EPI2MNI".
2025-09-17 07:22:42 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:22:42 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:23:12 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:23:12 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/SharpenEPI/sub-02_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/SharpenEPI/sub-02_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/SharpenEPI/sub-02_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:24:21 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:24:21 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:24:21 | INFO | niworkflows | Generating visual report
2025-09-17 07:24:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 115.822227s.
2025-09-17 07:24:38 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:24:39 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:24:42 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.411954s.
2025-09-17 07:24:42 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/smoothness/mapflow/_smoothness0".
2025-09-17 07:24:42 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:24:43 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.255806s.
2025-09-17 07:24:44 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/outliers/mapflow/_outliers0".
2025-09-17 07:24:44 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:24:45 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.671084s.
2025-09-17 07:24:46 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/gcor/mapflow/_gcor0".
2025-09-17 07:24:46 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:24:48 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.042247s.
2025-09-17 07:24:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/dilated_mask".
2025-09-17 07:24:48 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:24:49 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014421s.
2025-09-17 07:24:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:24:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:24:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.665686s.
2025-09-17 07:24:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/PlotBrainmask".
2025-09-17 07:24:52 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.307916s.
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/post_n4".
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:24:55 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.663739s.
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/EPI2MNI".
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:24:57 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:25:22 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:25:22 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/SharpenEPI/sub-02_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/SharpenEPI/sub-02_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/SharpenEPI/sub-02_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:26:31 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:26:31 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:26:31 | INFO | niworkflows | Generating visual report
2025-09-17 07:26:48 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.065623s.
2025-09-17 07:26:49 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:26:49 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:26:52 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.327281s.
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/smoothness/mapflow/_smoothness0".
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.276126s.
2025-09-17 07:26:55 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/outliers/mapflow/_outliers0".
2025-09-17 07:26:55 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:26:55 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.638625s.
2025-09-17 07:26:57 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/gcor/mapflow/_gcor0".
2025-09-17 07:26:57 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:26:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.890173s.
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/dilated_mask".
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013132s.
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.841824s.
2025-09-17 07:27:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/PlotBrainmask".
2025-09-17 07:27:03 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:04 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.323269s.
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/post_n4".
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.679166s.
2025-09-17 07:27:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/EPI2MNI".
2025-09-17 07:27:07 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:27:07 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:27:33 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/EPI2MNI/stderr.nipype-init).
2025-09-17 07:27:33 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:27:33 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/SharpenEPI/sub-02_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/SharpenEPI/sub-02_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/SharpenEPI/sub-02_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:28:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:28:43 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:28:43 | INFO | niworkflows | Generating visual report
2025-09-17 07:29:00 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 113.785475s.
2025-09-17 07:29:01 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:29:01 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:29:04 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.481293s.
2025-09-17 07:29:05 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/smoothness/mapflow/_smoothness0".
2025-09-17 07:29:05 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:29:05 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.278642s.
2025-09-17 07:29:07 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/outliers/mapflow/_outliers0".
2025-09-17 07:29:07 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:29:07 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.778931s.
2025-09-17 07:29:09 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/gcor/mapflow/_gcor0".
2025-09-17 07:29:09 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:29:10 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.118998s.
2025-09-17 07:29:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/dilated_mask".
2025-09-17 07:29:11 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:29:11 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016669s.
2025-09-17 07:29:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:29:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:29:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.81878s.
2025-09-17 07:29:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/PlotBrainmask".
2025-09-17 07:29:15 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:29:16 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.2661s.
2025-09-17 07:29:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/post_n4".
2025-09-17 07:29:17 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:29:17 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.669082s.
2025-09-17 07:29:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/EPI2MNI".
2025-09-17 07:29:19 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:29:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:29:45 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/EPI2MNI/stderr.nipype-init).
2025-09-17 07:29:45 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:29:45 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/SharpenEPI/sub-02_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/SharpenEPI/sub-02_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/SharpenEPI/sub-02_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:30:52 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:30:52 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:30:52 | INFO | niworkflows | Generating visual report
2025-09-17 07:31:09 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 110.288546s.
2025-09-17 07:31:11 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:31:11 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:31:14 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.4885260000000002s.
2025-09-17 07:31:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/smoothness/mapflow/_smoothness0".
2025-09-17 07:31:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:31:15 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.250869s.
2025-09-17 07:31:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/outliers/mapflow/_outliers0".
2025-09-17 07:31:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:31:17 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.739433s.
2025-09-17 07:31:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/gcor/mapflow/_gcor0".
2025-09-17 07:31:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:31:20 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.093233s.
2025-09-17 07:31:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/dilated_mask".
2025-09-17 07:31:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:31:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.020064s.
2025-09-17 07:31:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:31:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:31:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.78217s.
2025-09-17 07:31:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/PlotBrainmask".
2025-09-17 07:31:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:31:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.297389s.
2025-09-17 07:31:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/post_n4".
2025-09-17 07:31:27 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:31:27 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.679144s.
2025-09-17 07:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/EPI2MNI".
2025-09-17 07:31:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:31:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:31:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/EPI2MNI/stderr.nipype-init).
2025-09-17 07:31:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:31:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/SharpenEPI/sub-02_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/SharpenEPI/sub-02_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/SharpenEPI/sub-02_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:32:56 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:32:56 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:32:56 | INFO | niworkflows | Generating visual report
2025-09-17 07:33:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 104.080905s.
2025-09-17 07:33:15 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:33:15 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:33:18 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.3622199999999998s.
2025-09-17 07:33:19 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/smoothness/mapflow/_smoothness0".
2025-09-17 07:33:19 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:33:19 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.259055s.
2025-09-17 07:33:21 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/outliers/mapflow/_outliers0".
2025-09-17 07:33:21 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:33:21 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.663994s.
2025-09-17 07:33:23 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/gcor/mapflow/_gcor0".
2025-09-17 07:33:23 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:33:24 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.918133s.
2025-09-17 07:33:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/dilated_mask".
2025-09-17 07:33:25 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:33:25 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.021413s.
2025-09-17 07:33:27 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:33:27 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:33:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.884889s.
2025-09-17 07:33:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/PlotBrainmask".
2025-09-17 07:33:29 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:33:30 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.280195s.
2025-09-17 07:33:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/post_n4".
2025-09-17 07:33:31 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:33:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.679049s.
2025-09-17 07:33:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/EPI2MNI".
2025-09-17 07:33:33 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:33:33 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:34:00 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/EPI2MNI/stderr.nipype-init).
2025-09-17 07:34:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:34:00 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/SharpenEPI/sub-02_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/SharpenEPI/sub-02_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/SharpenEPI/sub-02_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:35:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:35:06 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:35:06 | INFO | niworkflows | Generating visual report
2025-09-17 07:35:23 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 110.344512s.
2025-09-17 07:35:25 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:35:25 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.26738s.
2025-09-17 07:35:29 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/smoothness/mapflow/_smoothness0".
2025-09-17 07:35:29 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:35:29 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.251607s.
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/outliers/mapflow/_outliers0".
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.62704s.
2025-09-17 07:35:33 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/gcor/mapflow/_gcor0".
2025-09-17 07:35:33 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.899259s.
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/dilated_mask".
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:35:35 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.011738s.
2025-09-17 07:35:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:35:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.858642s.
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/PlotBrainmask".
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.366268s.
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/final_masked".
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027139s.
2025-09-17 07:35:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ResampleSegmentation".
2025-09-17 07:35:43 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.915619s.
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_norm".
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005052s.
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/measures/mapflow/_measures0".
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:45 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.376776s.
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01803s.
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/subtract_mask".
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:49 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016289s.
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005076s.
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_bmask".
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005054s.
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d122b47d87a82fc320eb7805206889a059d23191/final_masked".
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022713s.
2025-09-17 07:35:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d122b47d87a82fc320eb7805206889a059d23191/ResampleSegmentation".
2025-09-17 07:35:53 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.848638s.
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_norm".
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004987s.
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/measures/mapflow/_measures0".
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:55 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.328203s.
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019152s.
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/subtract_mask".
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012361s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00483s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_bmask".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005216s.
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/final_masked".
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026475s.
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ResampleSegmentation".
2025-09-17 07:36:03 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.814633s.
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_norm".
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004827s.
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/measures/mapflow/_measures0".
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:05 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.407849s.
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014493s.
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/subtract_mask".
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012992s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004917s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_bmask".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005247s.
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/final_masked".
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027138s.
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c16b00736baea0e19ecf04f0d3e81317103aeb95/ResampleSegmentation".
2025-09-17 07:36:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.850729s.
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_norm".
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00491s.
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/measures/mapflow/_measures0".
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:15 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.426536s.
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014306s.
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/subtract_mask".
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:19 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015523s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004999s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_bmask".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004944s.
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/final_masked".
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022748s.
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/987f4ce718c1f278e6ca6b22356c7e29d144596b/ResampleSegmentation".
2025-09-17 07:36:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.863223s.
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_norm".
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004925s.
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/measures/mapflow/_measures0".
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:25 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.328031s.
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01709s.
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/subtract_mask".
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011281s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004782s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_bmask".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004804s.
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/final_masked".
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024564s.
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ResampleSegmentation".
2025-09-17 07:36:33 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.863979s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_norm".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004854s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/measures/mapflow/_measures0".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.328188s.
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:37 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016227s.
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/subtract_mask".
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:39 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010961s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005058s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_bmask".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005195s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/datasink/mapflow/_datasink0".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.0005s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004397s.
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/parcels".
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:41 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021451s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/datasink/mapflow/_datasink0".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.0005s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d122b47d87a82fc320eb7805206889a059d23191/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004675s.
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/parcels".
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:43 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021758s.
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/datasink/mapflow/_datasink0".
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000401s.
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004602s.
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/parcels".
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:45 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.02028s.
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/datasink/mapflow/_datasink0".
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000371s.
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004456s.
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/parcels".
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018405s.
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/datasink/mapflow/_datasink0".
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000488s.
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004804s.
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/parcels".
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016991s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/datasink/mapflow/_datasink0".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000371s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004527s.
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/parcels".
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:51 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014915s.
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:53 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.314612s.
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.319321s.
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:57 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.721059s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:00 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.504505s.
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:01 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:02 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.274478s.
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:37:03 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.437322s.
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5513a2165cf00b3f2dd2a7378b5f11ffad3ce9a9/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004859s.
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d122b47d87a82fc320eb7805206889a059d23191/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005089s.
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ed4d410b095e87cead4187b92941b4ee3f0ccb3/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005139s.
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c16b00736baea0e19ecf04f0d3e81317103aeb95/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005153s.
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/987f4ce718c1f278e6ca6b22356c7e29d144596b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004736s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6b2b0973b2c97fd84e2301ede4d41e0ddc002b97/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004554s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:10 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.244332s.
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:15 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.266726s.
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.247581s.
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:25 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.544684s.
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:37:27 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.861358s.
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:37:29 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:30 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.531492s.
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:31 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.233674s.
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:38 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.162106s.
2025-09-17 07:37:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:37:39 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:38:21 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 42.060033s.
2025-09-17 07:38:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:38:23 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:38:24 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.549429s.
2025-09-17 07:38:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:38:25 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:27 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.153515s.
2025-09-17 07:38:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:38:29 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.809201s.
2025-09-17 07:38:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:38:31 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:33 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.5672129999999997s.
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.043827s.
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:38:35 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:38:48 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.244143s.
2025-09-17 07:38:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:38:49 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:51 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.196927s.
2025-09-17 07:38:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:38:53 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:55 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.188319s.
2025-09-17 07:38:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:38:57 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:38:57 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004563s.
2025-09-17 07:38:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:38:57 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:38:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=25.6993)
2025-09-17 07:38:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=25.6993)
2025-09-17 07:38:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=25.6993)
2025-09-17 07:39:02 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.13394s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.00448s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004731s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004633s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004657s.
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject02.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137099..ds..sourcedata..raw..sub-02..anat..sub-02_T1w.nii.gz_metadata_FileSize0.0029194802045822144.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:39:03 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000428s.
2025-09-17 07:39:05 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:39:06 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:39:06 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 01s per subject.
2025-09-17 07:39:06 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 42min 08s).
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