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ds000002-mriqc/logs/duct/sub-01_2025.09.17T08.56.35-2161903stdout
Felix Hoffstaedter a2f3e6ccbc [DATALAD RUNCMD] Compute MRIQC for sub-01 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-01 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "87e9de7c-6b6d-4384-b774-0afa62676686",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-01",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:39:12 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2137091/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:56:39 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:56:39 | IMPORTANT | mriqc | File size ('t1w'): 0.00|0.00 GB [maximum|average].
2025-09-17 06:56:39 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-09-17 06:56:39 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.02 GB [maximum|average].
2025-09-17 06:56:39 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065636_3e6acf50-be92-4832-b21a-1810245cf4a1.toml.
2025-09-17 06:56:44 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:56:45 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:56:45 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-09-17 06:56:46 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:56:50 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:56:55 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:56:55 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.259676s.
2025-09-17 06:56:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/pick_echo".
2025-09-17 06:56:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000137s.
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/provenance/mapflow/_provenance0".
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.040068s.
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/pick_echo".
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000111s.
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/provenance/mapflow/_provenance0".
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.039288s.
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/194838e9c2605627b55067b4251b36953ed88be8/pick_echo".
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:01 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/provenance/mapflow/_provenance0".
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.054701s.
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/pick_echo".
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/provenance/mapflow/_provenance0".
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.055397s.
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/af1a817a059a63ab33e052c0e755451c01dccfb4/pick_echo".
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000119s.
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/provenance/mapflow/_provenance0".
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.040315s.
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/86241c7721028037524ffeb621346e1478c9192e/pick_echo".
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-09-17 06:57:09 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/provenance/mapflow/_provenance0".
2025-09-17 06:57:09 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:09 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.039832s.
2025-09-17 06:57:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:09 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:18 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.757211s.
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.604232s.
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.539216s.
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/non_steady_state_detector".
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152118s.
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/non_steady_state_detector".
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.150066s.
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/194838e9c2605627b55067b4251b36953ed88be8/non_steady_state_detector".
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.160082s.
2025-09-17 06:57:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/non_steady_state_detector".
2025-09-17 06:57:33 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:33 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159191s.
2025-09-17 06:57:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/af1a817a059a63ab33e052c0e755451c01dccfb4/non_steady_state_detector".
2025-09-17 06:57:35 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:35 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.150514s.
2025-09-17 06:57:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/86241c7721028037524ffeb621346e1478c9192e/non_steady_state_detector".
2025-09-17 06:57:37 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:37 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151452s.
2025-09-17 06:57:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:57:39 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:58:42 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 62.969081s.
2025-09-17 06:58:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:58:43 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:58:43 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008512s.
2025-09-17 06:58:43 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:43 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:44 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.902625s.
2025-09-17 06:58:45 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:45 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:46 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.892961s.
2025-09-17 06:58:47 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/194838e9c2605627b55067b4251b36953ed88be8/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:47 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:48 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.232397s.
2025-09-17 06:58:49 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:49 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:50 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.255408s.
2025-09-17 06:58:51 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/af1a817a059a63ab33e052c0e755451c01dccfb4/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:51 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:52 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.065767s.
2025-09-17 06:58:53 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/86241c7721028037524ffeb621346e1478c9192e/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:53 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:54 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.044694s.
2025-09-17 06:58:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:58:55 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:59:45 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 50.4887s.
2025-09-17 06:59:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/estimate_hm".
2025-09-17 06:59:47 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:01:45 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 118.385997s.
2025-09-17 07:01:47 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:01:47 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:01:48 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.316373s.
2025-09-17 07:01:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/estimate_hm".
2025-09-17 07:01:49 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:46 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 116.796674s.
2025-09-17 07:03:47 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:47 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:03:48 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.218888s.
2025-09-17 07:03:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/194838e9c2605627b55067b4251b36953ed88be8/estimate_hm".
2025-09-17 07:03:49 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:06:20 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 150.642574s.
2025-09-17 07:06:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:06:21 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:06:22 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.274187s.
2025-09-17 07:06:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/estimate_hm".
2025-09-17 07:06:23 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:08:55 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 151.977461s.
2025-09-17 07:08:57 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:08:57 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:08:58 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.280668s.
2025-09-17 07:08:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/af1a817a059a63ab33e052c0e755451c01dccfb4/estimate_hm".
2025-09-17 07:08:59 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:10:56 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 117.254306s.
2025-09-17 07:10:57 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:10:57 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:10:58 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.215476s.
2025-09-17 07:10:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/86241c7721028037524ffeb621346e1478c9192e/estimate_hm".
2025-09-17 07:10:59 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:12:56 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 116.782267s.
2025-09-17 07:12:57 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:12:57 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.272057s.
2025-09-17 07:12:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:12:59 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 15.450624s.
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:13:15 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.99342s.
2025-09-17 07:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:13:19 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.807603s.
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:13:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.629008s.
2025-09-17 07:13:27 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:27 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.460064s.
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ComputeFD".
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:35 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006431s.
2025-09-17 07:13:37 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:37 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:38 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.34905s.
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:39 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:47 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.625241s.
2025-09-17 07:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ComputeFD".
2025-09-17 07:13:47 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:47 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006471s.
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:49 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:50 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.33382s.
2025-09-17 07:13:51 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/194838e9c2605627b55067b4251b36953ed88be8/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:51 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.848718s.
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/194838e9c2605627b55067b4251b36953ed88be8/ComputeFD".
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:01 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005994s.
2025-09-17 07:14:03 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:03 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:04 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.447673s.
2025-09-17 07:14:05 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:05 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.799523s.
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ComputeFD".
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:15 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00797s.
2025-09-17 07:14:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:17 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.45096s.
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/af1a817a059a63ab33e052c0e755451c01dccfb4/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.507856s.
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/af1a817a059a63ab33e052c0e755451c01dccfb4/ComputeFD".
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.007461s.
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.351774s.
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/86241c7721028037524ffeb621346e1478c9192e/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.524685s.
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/86241c7721028037524ffeb621346e1478c9192e/ComputeFD".
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002503s.
2025-09-17 07:14:41 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:14:41 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:14:42 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.338014s.
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:14:44 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.240752s.
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:14:46 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:15:47 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/stderr.nipype-init).
2025-09-17 07:15:47 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:15:47 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:16:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:16:02 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:16:02 | INFO | niworkflows | Generating visual report
2025-09-17 07:16:20 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 94.384245s.
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:21 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004577s.
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004479s.
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/mean/mapflow/_mean0".
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:22 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.601707s.
2025-09-17 07:16:23 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5a270c01c2ab5d4d2fc8668511f463e0459e528e/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:23 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:24 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.435897s.
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/quality/mapflow/_quality0".
2025-09-17 07:16:25 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.153142s.
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/mean/mapflow/_mean0".
2025-09-17 07:16:27 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:28 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.548237s.
2025-09-17 07:16:29 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b029bba6780c01c110143caadd49a0e9d3d6c9b1/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:29 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.43735s.
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/quality/mapflow/_quality0".
2025-09-17 07:16:31 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.156194s.
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/194838e9c2605627b55067b4251b36953ed88be8/mean/mapflow/_mean0".
2025-09-17 07:16:33 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:34 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.645934s.
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/194838e9c2605627b55067b4251b36953ed88be8/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:35 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:36 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.502365s.
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/quality/mapflow/_quality0".
2025-09-17 07:16:37 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.47664s.
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/mean/mapflow/_mean0".
2025-09-17 07:16:39 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:40 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.624925s.
2025-09-17 07:16:41 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/54e75e2d54f34530121c08a6b88aefed5bcc03f8/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:41 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:42 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.505065s.
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/quality/mapflow/_quality0".
2025-09-17 07:16:43 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.479693s.
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/af1a817a059a63ab33e052c0e755451c01dccfb4/mean/mapflow/_mean0".
2025-09-17 07:16:45 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:46 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.525306s.
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/af1a817a059a63ab33e052c0e755451c01dccfb4/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:47 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:48 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.421322s.
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/quality/mapflow/_quality0".
2025-09-17 07:16:49 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.107243s.
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/86241c7721028037524ffeb621346e1478c9192e/mean/mapflow/_mean0".
2025-09-17 07:16:51 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:16:52 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.532005s.
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/86241c7721028037524ffeb621346e1478c9192e/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:16:53 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:16:54 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.403827s.
2025-09-17 07:16:55 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/quality/mapflow/_quality0".
2025-09-17 07:16:55 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.133674s.
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:57 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004455s.
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/pre_clip".
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:16:58 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.201003s.
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/SharpenEPI".
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.380406s.
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.692818s.
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:04 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.84626s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.796574s.
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/pre_clip".
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.205339s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/SharpenEPI".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.424591s.
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.662807s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.886328s.
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.855871s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/pre_clip".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.209671s.
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/SharpenEPI".
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.469641s.
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.679766s.
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.945358s.
2025-09-17 07:17:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.864515s.
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/pre_clip".
2025-09-17 07:17:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:28 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.2115s.
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/SharpenEPI".
2025-09-17 07:17:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.441886s.
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.701473s.
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.858333s.
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.829803s.
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/pre_clip".
2025-09-17 07:17:37 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:38 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.214593s.
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/SharpenEPI".
2025-09-17 07:17:39 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.448341s.
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.712381s.
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.87605s.
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.853232s.
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/pre_clip".
2025-09-17 07:17:47 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:17:48 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.223435s.
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/SharpenEPI".
2025-09-17 07:17:49 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.416624s.
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:17:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.711639s.
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:17:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.852826s.
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:17:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.90292s.
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/pre_n4".
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.399464s.
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00499s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004931s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005245s.
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/pre_n4".
2025-09-17 07:18:00 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.378167s.
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005052s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00489s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005s.
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/pre_n4".
2025-09-17 07:18:02 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.374074s.
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00532s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00527s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005022s.
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/pre_n4".
2025-09-17 07:18:04 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.359596s.
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004762s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004917s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004765s.
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/pre_n4".
2025-09-17 07:18:06 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.388608s.
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005063s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.013863s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005346s.
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/pre_n4".
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.345631s.
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005817s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005829s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005953s.
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/synthstrip".
2025-09-17 07:18:10 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:51 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.807072s.
2025-09-17 07:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/synthstrip".
2025-09-17 07:18:52 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:19:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.599465s.
2025-09-17 07:19:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/synthstrip".
2025-09-17 07:19:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:20:20 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.686848s.
2025-09-17 07:20:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/synthstrip".
2025-09-17 07:20:22 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.481852s.
2025-09-17 07:21:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/synthstrip".
2025-09-17 07:21:08 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:21:52 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.488024s.
2025-09-17 07:21:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/synthstrip".
2025-09-17 07:21:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:22:38 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.146968s.
2025-09-17 07:22:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/post_n4".
2025-09-17 07:22:40 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:22:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.829508s.
2025-09-17 07:22:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/EPI2MNI".
2025-09-17 07:22:42 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:22:42 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:23:05 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/EPI2MNI/stderr.nipype-init).
2025-09-17 07:23:05 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:23:05 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/SharpenEPI/sub-01_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/SharpenEPI/sub-01_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/SharpenEPI/sub-01_task-deterministicclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:24:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:24:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:24:17 | INFO | niworkflows | Generating visual report
2025-09-17 07:24:34 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.452925s.
2025-09-17 07:24:36 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:24:36 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:24:40 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.080475s.
2025-09-17 07:24:42 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/smoothness/mapflow/_smoothness0".
2025-09-17 07:24:42 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:24:42 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.258779s.
2025-09-17 07:24:44 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/outliers/mapflow/_outliers0".
2025-09-17 07:24:44 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:24:44 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.742641s.
2025-09-17 07:24:46 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/gcor/mapflow/_gcor0".
2025-09-17 07:24:46 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:24:47 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.070585s.
2025-09-17 07:24:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/dilated_mask".
2025-09-17 07:24:48 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:24:48 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016044s.
2025-09-17 07:24:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:24:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:24:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.797054s.
2025-09-17 07:24:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/PlotBrainmask".
2025-09-17 07:24:52 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:24:53 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.3252169999999999s.
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/post_n4".
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:24:54 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.751258s.
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/EPI2MNI".
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:24:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:25:19 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:25:19 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/SharpenEPI/sub-01_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/SharpenEPI/sub-01_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/SharpenEPI/sub-01_task-deterministicclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:26:28 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:26:28 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:26:28 | INFO | niworkflows | Generating visual report
2025-09-17 07:26:45 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 109.270106s.
2025-09-17 07:26:46 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:26:46 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:26:50 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.056192s.
2025-09-17 07:26:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/smoothness/mapflow/_smoothness0".
2025-09-17 07:26:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:26:52 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.252039s.
2025-09-17 07:26:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/outliers/mapflow/_outliers0".
2025-09-17 07:26:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:26:55 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.709284s.
2025-09-17 07:26:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/gcor/mapflow/_gcor0".
2025-09-17 07:26:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:26:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.929994s.
2025-09-17 07:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/dilated_mask".
2025-09-17 07:26:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:26:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017999s.
2025-09-17 07:27:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:27:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:27:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.816016s.
2025-09-17 07:27:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/PlotBrainmask".
2025-09-17 07:27:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:03 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.327037s.
2025-09-17 07:27:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/post_n4".
2025-09-17 07:27:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.728425s.
2025-09-17 07:27:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/EPI2MNI".
2025-09-17 07:27:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:27:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:27:29 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/EPI2MNI/stderr.nipype-init).
2025-09-17 07:27:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:27:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/SharpenEPI/sub-01_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/SharpenEPI/sub-01_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/SharpenEPI/sub-01_task-mixedeventrelatedprobe_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:28:36 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:28:36 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:28:36 | INFO | niworkflows | Generating visual report
2025-09-17 07:28:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 106.311396s.
2025-09-17 07:28:54 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:28:54 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:28:58 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.351215s.
2025-09-17 07:29:00 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/smoothness/mapflow/_smoothness0".
2025-09-17 07:29:00 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:29:00 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.277951s.
2025-09-17 07:29:02 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/outliers/mapflow/_outliers0".
2025-09-17 07:29:02 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:29:03 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.865086s.
2025-09-17 07:29:04 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/gcor/mapflow/_gcor0".
2025-09-17 07:29:04 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:29:05 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.181051s.
2025-09-17 07:29:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/dilated_mask".
2025-09-17 07:29:06 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:29:06 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016225s.
2025-09-17 07:29:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:29:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:29:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.848824s.
2025-09-17 07:29:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/PlotBrainmask".
2025-09-17 07:29:10 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:29:11 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.341872s.
2025-09-17 07:29:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/post_n4".
2025-09-17 07:29:12 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:29:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.722811s.
2025-09-17 07:29:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/EPI2MNI".
2025-09-17 07:29:14 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:29:14 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:29:36 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/EPI2MNI/stderr.nipype-init).
2025-09-17 07:29:36 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:29:36 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/SharpenEPI/sub-01_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/SharpenEPI/sub-01_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/SharpenEPI/sub-01_task-mixedeventrelatedprobe_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:30:42 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:30:42 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:30:42 | INFO | niworkflows | Generating visual report
2025-09-17 07:30:59 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 104.660315s.
2025-09-17 07:31:00 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:31:00 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:31:04 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.341015s.
2025-09-17 07:31:06 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/smoothness/mapflow/_smoothness0".
2025-09-17 07:31:06 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:31:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.27732s.
2025-09-17 07:31:08 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/outliers/mapflow/_outliers0".
2025-09-17 07:31:08 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:31:09 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.892295s.
2025-09-17 07:31:10 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/gcor/mapflow/_gcor0".
2025-09-17 07:31:10 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:31:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.173032s.
2025-09-17 07:31:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/dilated_mask".
2025-09-17 07:31:12 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:31:12 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013083s.
2025-09-17 07:31:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:31:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:31:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.86681s.
2025-09-17 07:31:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/PlotBrainmask".
2025-09-17 07:31:16 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:31:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.381843s.
2025-09-17 07:31:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/post_n4".
2025-09-17 07:31:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:31:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.747926s.
2025-09-17 07:31:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/EPI2MNI".
2025-09-17 07:31:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:31:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:31:44 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:31:44 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/SharpenEPI/sub-01_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/SharpenEPI/sub-01_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/SharpenEPI/sub-01_task-probabilisticclassification_run-01_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:32:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:32:50 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:32:50 | INFO | niworkflows | Generating visual report
2025-09-17 07:33:06 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 106.508929s.
2025-09-17 07:33:08 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:33:08 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:33:12 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.928188s.
2025-09-17 07:33:14 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/smoothness/mapflow/_smoothness0".
2025-09-17 07:33:14 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:33:14 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.253512s.
2025-09-17 07:33:16 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/outliers/mapflow/_outliers0".
2025-09-17 07:33:16 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:33:17 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.719987s.
2025-09-17 07:33:18 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/gcor/mapflow/_gcor0".
2025-09-17 07:33:18 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:33:19 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.9437s.
2025-09-17 07:33:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/dilated_mask".
2025-09-17 07:33:20 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:33:20 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.020382s.
2025-09-17 07:33:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:33:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:33:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.86126s.
2025-09-17 07:33:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/PlotBrainmask".
2025-09-17 07:33:24 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:33:25 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.397078s.
2025-09-17 07:33:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/post_n4".
2025-09-17 07:33:26 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:33:27 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.737976s.
2025-09-17 07:33:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/EPI2MNI".
2025-09-17 07:33:28 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:33:28 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:33:51 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/EPI2MNI/stderr.nipype-init).
2025-09-17 07:33:51 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:33:51 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/SharpenEPI/sub-01_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/SharpenEPI/sub-01_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/SharpenEPI/sub-01_task-probabilisticclassification_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:34:58 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:34:58 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:34:58 | INFO | niworkflows | Generating visual report
2025-09-17 07:35:14 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 106.358274s.
2025-09-17 07:35:16 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:35:16 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:35:20 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.940003s.
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/smoothness/mapflow/_smoothness0".
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:35:22 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.267307s.
2025-09-17 07:35:24 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/outliers/mapflow/_outliers0".
2025-09-17 07:35:24 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:35:25 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.72584s.
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/gcor/mapflow/_gcor0".
2025-09-17 07:35:26 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:35:27 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.933432s.
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/dilated_mask".
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:35:28 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018753s.
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:35:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:35:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.876593s.
2025-09-17 07:35:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/PlotBrainmask".
2025-09-17 07:35:32 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:35:33 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.346075s.
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/final_masked".
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028228s.
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ResampleSegmentation".
2025-09-17 07:35:36 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:37 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.053591s.
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_norm".
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005214s.
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/measures/mapflow/_measures0".
2025-09-17 07:35:38 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:39 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.362755s.
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:40 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.02677s.
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/subtract_mask".
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:42 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014504s.
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005099s.
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_bmask".
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005003s.
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/final_masked".
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:44 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023993s.
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ResampleSegmentation".
2025-09-17 07:35:46 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:47 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.966063s.
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_norm".
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00471s.
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/measures/mapflow/_measures0".
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:48 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.327185s.
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/timeseries/mapflow/_timeseries0".
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:35:50 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015603s.
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/subtract_mask".
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:35:52 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.007123s.
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005016s.
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_bmask".
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004723s.
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/194838e9c2605627b55067b4251b36953ed88be8/final_masked".
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:35:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.019624s.
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/194838e9c2605627b55067b4251b36953ed88be8/ResampleSegmentation".
2025-09-17 07:35:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:35:57 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.932447s.
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_norm".
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004886s.
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/measures/mapflow/_measures0".
2025-09-17 07:35:58 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:35:59 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.446318s.
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:00 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.012623s.
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/subtract_mask".
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:02 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01625s.
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004931s.
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_bmask".
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004753s.
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/final_masked".
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024406s.
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ResampleSegmentation".
2025-09-17 07:36:06 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.987846s.
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_norm".
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005596s.
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/measures/mapflow/_measures0".
2025-09-17 07:36:08 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:09 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.441955s.
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:10 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.020598s.
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/subtract_mask".
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:12 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009481s.
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00502s.
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_bmask".
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004864s.
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/final_masked".
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:14 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022999s.
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/af1a817a059a63ab33e052c0e755451c01dccfb4/ResampleSegmentation".
2025-09-17 07:36:16 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.984818s.
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_norm".
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004719s.
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/measures/mapflow/_measures0".
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:18 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.330676s.
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:20 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015336s.
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/subtract_mask".
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:22 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012801s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004809s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_bmask".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00477s.
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/86241c7721028037524ffeb621346e1478c9192e/final_masked".
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:36:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026687s.
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/86241c7721028037524ffeb621346e1478c9192e/ResampleSegmentation".
2025-09-17 07:36:26 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:36:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.960387s.
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_norm".
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004709s.
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/measures/mapflow/_measures0".
2025-09-17 07:36:28 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:36:29 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.325035s.
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/timeseries/mapflow/_timeseries0".
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:36:30 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015219s.
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/subtract_mask".
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:36:32 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010687s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004955s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_bmask".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004694s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/datasink/mapflow/_datasink0".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00053s.
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:34 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004116s.
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/parcels".
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:35 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017201s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/datasink/mapflow/_datasink0".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00043s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004063s.
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/parcels".
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:36 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017588s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/datasink/mapflow/_datasink0".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000375s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/194838e9c2605627b55067b4251b36953ed88be8/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004042s.
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/parcels".
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:38 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017005s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/datasink/mapflow/_datasink0".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000383s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00412s.
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/parcels".
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:40 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017739s.
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/datasink/mapflow/_datasink0".
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000389s.
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004405s.
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/parcels".
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:42 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017119s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/datasink/mapflow/_datasink0".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000365s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/86241c7721028037524ffeb621346e1478c9192e/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004106s.
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/parcels".
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:36:44 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014186s.
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:46 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:47 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.370492s.
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:48 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:49 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.3277109999999999s.
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:50 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.738102s.
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:52 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.546448s.
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:54 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:55 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.308414s.
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:36:56 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.468382s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5a270c01c2ab5d4d2fc8668511f463e0459e528e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.011072s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b029bba6780c01c110143caadd49a0e9d3d6c9b1/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004648s.
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/194838e9c2605627b55067b4251b36953ed88be8/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00492s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/54e75e2d54f34530121c08a6b88aefed5bcc03f8/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004898s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/af1a817a059a63ab33e052c0e755451c01dccfb4/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004876s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/86241c7721028037524ffeb621346e1478c9192e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004787s.
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:36:59 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:04 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 5.021106s.
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:06 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:11 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 5.1070969999999996s.
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:12 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:37:17 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 5.06092s.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:37:18 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:37:20 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:21 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.569222s.
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:37:22 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:23 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.047054s.
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:37:24 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.563044s.
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:37:26 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.256355s.
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:37:28 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:37:33 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.238015s.
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:37:34 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 51.843506s.
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:38:26 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.492683s.
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:38:28 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:30 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.195236s.
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:38:32 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:38:33 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.72706s.
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:38:34 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:37 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.485423s.
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.040353s.
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:38:38 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:38:50 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.074032s.
2025-09-17 07:38:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:38:52 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:54 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.164303s.
2025-09-17 07:38:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:38:56 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:38:58 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.257034s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004385s.
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:39:00 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:39:02 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=40.6827)
2025-09-17 07:39:02 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=40.6827)
2025-09-17 07:39:02 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=40.6827)
2025-09-17 07:39:05 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.048348s.
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004509s.
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004464s.
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:06 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004702s.
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004648s.
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject01.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2137091..ds..sourcedata..raw..sub-01..anat..sub-01_T1w.nii.gz_metadata_FileSize0.0030671851709485054.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:39:07 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000473s.
2025-09-17 07:39:08 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:39:10 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-09-17 07:39:10 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 04s per subject.
2025-09-17 07:39:10 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 42min 33s).
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