openneuro-mriqc24.0.2/ds004594
Watch
2
0
Fork
You've already forked ds004594
 0
Code Activity
No description
58 commits 42 branches 0 tags 1.4 GiB
  • HTML 99.7%
  • Shell 0.3%
Find a file
Exact
Repository files (latest commit first)
Filename Latest commit message Latest commit date
Felix Hoffstaedter 58752ca71c [DATALAD RUNCMD] run MRIQC classifier 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--0.15.1.sing mriqc_clf --load-classifier -X group_T1w.tsv;   mv mclf_run*data-unseen_pred.csv mclf_data-unseen_pred.csv",
 "dsid": "6f8fbc0b-aeb9-4c65-912e-6d1a00c20b24",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--0.15.1.sing"
 ],
 "inputs": [
  "group_T1w.tsv"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2026-04-03 01:14:55 +02:00
.datalad
code
duct-logs Merge results 2026-04-03 01:12:45 +02:00
sourcedata
sub-103 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-105 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-107 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-108 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-109 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-110 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-112 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-113 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-114 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-115 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-116 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-117 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-118 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-119 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-120 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-121 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-122 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-123 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-126 move data to dataset root 2026-04-03 01:13:01 +02:00
sub-128 move data to dataset root 2026-04-03 01:13:01 +02:00
.bidsignore move data to dataset root 2026-04-03 01:13:01 +02:00
.gitattributes
.gitignore
.gitmodules
CHANGELOG.md
dataset_description.json move data to dataset root 2026-04-03 01:13:01 +02:00
group_bold.html [DATALAD RUNCMD] Compute MRIQC group stats 2026-04-03 01:14:38 +02:00
group_bold.tsv [DATALAD RUNCMD] Compute MRIQC group stats 2026-04-03 01:14:38 +02:00
group_T1w.html [DATALAD RUNCMD] Compute MRIQC group stats 2026-04-03 01:14:38 +02:00
group_T1w.tsv [DATALAD RUNCMD] Compute MRIQC group stats 2026-04-03 01:14:38 +02:00
mclf_data-unseen_pred.csv [DATALAD RUNCMD] run MRIQC classifier 2026-04-03 01:14:55 +02:00
README.md
sub-103_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-103_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-103_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-103_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-103_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-105_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-105_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-105_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-105_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-105_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-107_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-107_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-107_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-107_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-107_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-108_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-108_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-108_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-108_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-108_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-109_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-109_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-109_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-109_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-109_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-110_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-110_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-110_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-110_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-110_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-112_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-112_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-112_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-112_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-112_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-113_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-113_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-113_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-113_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-113_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-114_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-114_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-114_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-114_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-114_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-115_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-115_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-115_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-115_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-115_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-116_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-116_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-116_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-116_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-116_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-117_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-117_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-117_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-117_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-117_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-118_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-118_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-118_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-118_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-118_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-119_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-119_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-119_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-119_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-119_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-120_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-120_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-120_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-120_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-120_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-121_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-121_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-121_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-121_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-121_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-122_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-122_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-122_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-122_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-122_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-123_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-123_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-123_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-123_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-123_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-126_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-126_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-126_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-126_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-126_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-128_T1w.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-128_task-matchjudgment_run-01_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-128_task-matchjudgment_run-02_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-128_task-matchjudgment_run-03_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00
sub-128_task-matchjudgment_run-04_bold.html move data to dataset root 2026-04-03 01:13:01 +02:00

README.md

ds004594 - MRIQC derivatives

This dataset is a BIDS Derivatives dataset resulting from running MRIQC 24.0.2 on ds004594.

Methods

MRIQC documentation can be found on https://mriqc.readthedocs.io/.

This dataset was created using BOOTSTRAP - a high-throughput container workflow for MRIQC implementing the FAIRly Big Workflow using Datalad and Singularity containers for full reproducibility and provenance capture including resource consumption via con-duct.

Acknowledgements

The authors from the Institute of Neuroscience and Medicine (INM-7) at the Forschungszentrum Jülich, Germany gratefully acknowledge the FENIX Research Infrastructure for funding this project by providing cloud computing time on the FZJ Supercomputer JUSUF at Jülich Supercomputing Centre (JSC).