openneuro-mriqc24.0.2/ds003469
Watch
2
0
Fork
You've already forked ds003469
 0
Code Activity
No description
180 commits 164 branches 0 tags 1.6 GiB
  • HTML 99.8%
  • Shell 0.2%
Find a file
Exact
Repository files (latest commit first)
Filename Latest commit message Latest commit date
Felix Hoffstaedter 1f1f692870 [DATALAD RUNCMD] run MRIQC classifier 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--0.15.1.sing mriqc_clf --load-classifier -X group_T1w.tsv;   mv mclf_run*data-unseen_pred.csv mclf_data-unseen_pred.csv",
 "dsid": "d548b402-ca86-4d71-8bbd-6601207cdc2e",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--0.15.1.sing"
 ],
 "inputs": [
  "group_T1w.tsv"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2026-06-03 13:49:19 +02:00
.datalad
code
duct-logs
sourcedata
sub-013 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-014 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-015 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-018 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-022 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-028 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-029 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-030 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-035 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-036 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-037 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-038 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-043 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-044 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-045 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-046 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-047 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-049 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-050 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-054 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-056 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-059 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-060 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-061 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-111 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-112 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-113 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-114 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-115 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-116 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-117 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-118 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-119 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-120 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-122 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-123 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-124 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-126 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-127 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-129 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-133 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-134 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-152 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-153 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-155 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-159 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-160 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-161 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-162 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-166 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-167 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-169 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-170 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-171 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-172 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-173 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-174 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-175 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-176 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-177 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-178 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-181 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-182 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-183 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-184 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-186 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-192 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-193 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-194 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-196 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-197 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-200 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-201 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-202 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-205 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-207 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-208 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-209 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-211 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-212 move data to dataset root 2026-06-03 13:38:43 +02:00
sub-214 move data to dataset root 2026-06-03 13:38:43 +02:00
.bidsignore move data to dataset root 2026-06-03 13:38:43 +02:00
.gitattributes
.gitignore
.gitmodules
CHANGELOG.md
dataset_description.json move data to dataset root 2026-06-03 13:38:43 +02:00
group_bold.html [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 13:49:00 +02:00
group_bold.tsv [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 13:49:00 +02:00
group_T1w.html [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 13:49:00 +02:00
group_T1w.tsv [DATALAD RUNCMD] Compute MRIQC group stats 2026-06-03 13:49:00 +02:00
mclf_data-unseen_pred.csv [DATALAD RUNCMD] run MRIQC classifier 2026-06-03 13:49:19 +02:00
README.md
sub-013_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-013_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-014_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-014_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-015_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-015_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-018_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-018_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-022_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-022_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-028_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-028_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-029_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-029_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-030_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-030_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-035_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-035_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-036_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-036_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-037_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-037_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-038_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-038_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-043_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-043_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-044_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-044_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-045_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-045_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-046_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-046_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-047_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-047_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-049_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-049_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-050_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-050_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-054_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-054_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-056_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-056_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-059_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-059_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-060_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-060_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-061_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-061_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-111_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-111_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-112_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-112_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-113_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-113_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-114_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-114_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-115_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-115_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-116_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-116_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-117_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-117_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-118_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-118_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-119_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-119_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-120_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-120_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-122_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-122_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-123_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-123_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-124_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-124_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-126_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-126_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-127_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-127_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-129_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-129_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-133_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-133_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-134_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-134_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-152_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-152_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-153_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-153_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-155_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-155_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-159_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-159_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-160_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-160_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-161_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-161_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-162_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-162_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-166_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-166_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-167_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-167_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-169_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-169_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-170_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-170_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-171_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-171_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-172_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-172_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-173_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-173_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-174_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-174_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-175_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-175_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-176_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-176_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-177_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-177_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-178_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-178_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-181_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-181_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-182_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-182_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-183_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-183_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-184_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-184_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-186_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-186_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-192_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-192_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-193_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-193_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-194_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-194_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-196_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-196_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-197_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-197_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-200_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-200_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-201_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-201_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-202_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-202_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-205_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-205_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-207_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-207_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-208_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-208_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-209_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-209_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-211_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-211_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-212_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-212_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-214_T1w.html move data to dataset root 2026-06-03 13:38:43 +02:00
sub-214_task-rest_bold.html move data to dataset root 2026-06-03 13:38:43 +02:00

README.md

ds003469 - MRIQC derivatives

This dataset is a BIDS Derivatives dataset resulting from running MRIQC 24.0.2 on ds003469.

Methods

MRIQC documentation can be found on https://mriqc.readthedocs.io/.

This dataset was created using BOOTSTRAP - a high-throughput container workflow for MRIQC implementing the FAIRly Big Workflow using Datalad and Singularity containers for full reproducibility and provenance capture including resource consumption via con-duct.

Acknowledgements

The authors from the Institute of Neuroscience and Medicine (INM-7) at the Forschungszentrum Jülich, Germany gratefully acknowledge the FENIX Research Infrastructure for funding this project by providing cloud computing time on the FZJ Supercomputer JUSUF at Jülich Supercomputing Centre (JSC).