[BUG] Logging output is duplicated #8

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opened 2022-04-20 08:04:54 +00:00 by fraimondo · 0 comments

fraimondo commented

2022-04-20 08:04:54 +00:00

(Migrated from github.com)

Example from junifer collect:

2022-04-20 08:21:46,298 [    INFO] ===== Lib Versions ===== (logging.py:79)
INFO:JUNIFER:===== Lib Versions =====
2022-04-20 08:21:46,299 [    INFO] numpy: 1.21.5 (logging.py:73)
INFO:JUNIFER:numpy: 1.21.5
2022-04-20 08:21:46,299 [    INFO] scipy: 1.7.3 (logging.py:73)
INFO:JUNIFER:scipy: 1.7.3
2022-04-20 08:21:46,299 [    INFO] pandas: 1.4.1 (logging.py:73)
INFO:JUNIFER:pandas: 1.4.1
2022-04-20 08:21:46,299 [    INFO] nilearn: 0.9.1 (logging.py:73)
INFO:JUNIFER:nilearn: 0.9.1
2022-04-20 08:21:46,299 [    INFO] nibabel: 3.2.2 (logging.py:73)
INFO:JUNIFER:nibabel: 3.2.2
2022-04-20 08:21:46,299 [    INFO] junifer: 0.0.1.dev100 (logging.py:73)
INFO:JUNIFER:junifer: 0.0.1.dev100
2022-04-20 08:21:46,299 [    INFO] ======================== (logging.py:88)
INFO:JUNIFER:========================
2022-04-20 08:21:46,299 [    INFO] Parsing yaml file: /home/fraimondo/dev/projects/nimrls/src/junifer_jobs/UKB_Functional/config.yaml (parser.py:11)
INFO:JUNIFER:Parsing yaml file: /home/fraimondo/dev/projects/nimrls/src/junifer_jobs/UKB_Functional/config.yaml
2022-04-20 08:21:46,306 [    INFO] Collecting data using SQLiteFeatureStorage (functions.py:86)
INFO:JUNIFER:Collecting data using SQLiteFeatureStorage
2022-04-20 08:21:46,307 [    INFO] Collecting data from /data/project/ukb_rls/data/ukb_functional/*fALFF_GCOR_LCOR.db (sqlite.py:188)
INFO:JUNIFER:Collecting data from /data/project/ukb_rls/data/ukb_functional/*fALFF_GCOR_LCOR.db

Example from junifer collect: ``` 2022-04-20 08:21:46,298 [ INFO] ===== Lib Versions ===== (logging.py:79) INFO:JUNIFER:===== Lib Versions ===== 2022-04-20 08:21:46,299 [ INFO] numpy: 1.21.5 (logging.py:73) INFO:JUNIFER:numpy: 1.21.5 2022-04-20 08:21:46,299 [ INFO] scipy: 1.7.3 (logging.py:73) INFO:JUNIFER:scipy: 1.7.3 2022-04-20 08:21:46,299 [ INFO] pandas: 1.4.1 (logging.py:73) INFO:JUNIFER:pandas: 1.4.1 2022-04-20 08:21:46,299 [ INFO] nilearn: 0.9.1 (logging.py:73) INFO:JUNIFER:nilearn: 0.9.1 2022-04-20 08:21:46,299 [ INFO] nibabel: 3.2.2 (logging.py:73) INFO:JUNIFER:nibabel: 3.2.2 2022-04-20 08:21:46,299 [ INFO] junifer: 0.0.1.dev100 (logging.py:73) INFO:JUNIFER:junifer: 0.0.1.dev100 2022-04-20 08:21:46,299 [ INFO] ======================== (logging.py:88) INFO:JUNIFER:======================== 2022-04-20 08:21:46,299 [ INFO] Parsing yaml file: /home/fraimondo/dev/projects/nimrls/src/junifer_jobs/UKB_Functional/config.yaml (parser.py:11) INFO:JUNIFER:Parsing yaml file: /home/fraimondo/dev/projects/nimrls/src/junifer_jobs/UKB_Functional/config.yaml 2022-04-20 08:21:46,306 [ INFO] Collecting data using SQLiteFeatureStorage (functions.py:86) INFO:JUNIFER:Collecting data using SQLiteFeatureStorage 2022-04-20 08:21:46,307 [ INFO] Collecting data from /data/project/ukb_rls/data/ukb_functional/*fALFF_GCOR_LCOR.db (sqlite.py:188) INFO:JUNIFER:Collecting data from /data/project/ukb_rls/data/ukb_functional/*fALFF_GCOR_LCOR.db ```