ds005479_QCworkflow/MRIQC/sub-05/func/sub-05_task-MID_bold.json
Felix Hoffstaedter 683275115b [DATALAD RUNCMD] Compute MRIQC for sub-05
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "singularity exec -B {pwd} --cleanenv code/repronim_containers/images/bids/bids-mriqc--24.0.2.sing /singularity inputs/ds005479 MRIQC participant --participant-label sub-05 --no-datalad-get --notrack --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "e162781a-4517-445d-ac1b-a1b80f4e35a6",
 "exit": 0,
 "extra_inputs": [
  "code/repronim_containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "inputs/ds005479/sub-05"
 ],
 "outputs": [
  "MRIQC"
 ],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-06-05 00:37:51 +02:00

217 lines
4.8 KiB
JSON

{
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"aqi": 0.018205562166246848,
"bids_meta": {
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"AcquisitionNumber": 1,
"AcquisitionTime": "15:49:48.885000",
"BandwidthPerPixelPhaseEncode": 23.81,
"BaseResolution": 84,
"BodyPartExamined": "BRAIN",
"CoilCombinationMethod": "Sum of Squares",
"CoilString": "Head_32",
"ConversionSoftware": "dcm2niix",
"ConversionSoftwareVersion": "v1.0.20220720",
"DerivedVendorReportedEchoSpacing": 0.00049999,
"DeviceSerialNumber": "167119",
"DwellTime": 2.6e-6,
"EchoTime": 0.03,
"EchoTrainLength": 84,
"EffectiveEchoSpacing": 0.00049999,
"FileSize": 0.15651198476552963,
"FileSizeUnits": "GB",
"FlipAngle": 70,
"ImageOrientationPatientDICOM": [
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],
"ImageType": [
"ORIGINAL",
"PRIMARY",
"FMRI",
"NONE"
],
"ImageTypeText": [
"ORIGINAL",
"PRIMARY",
"M",
"ND"
],
"ImagingFrequency": 123.239,
"InPlanePhaseEncodingDirectionDICOM": "COL",
"InstitutionAddress": "Pasteura 3,Warszawa,District,PL,02093",
"InstitutionName": "Instytut Biologii Doswiadczalnej",
"MRAcquisitionType": "2D",
"MTState": false,
"MagneticFieldStrength": 3,
"Manufacturer": "Siemens",
"ManufacturersModelName": "MAGNETOM Prisma Fit",
"Modality": "MR",
"MultibandAccelerationFactor": 2,
"NonlinearGradientCorrection": false,
"NumberOfVolumes": 397,
"ParallelAcquisitionTechnique": "SMS",
"PartialFourier": 1,
"PatientPosition": "HFS",
"PercentPhaseFOV": 100,
"PercentSampling": 100,
"PhaseEncodingDirection": "j-",
"PhaseResolution": 1,
"PixelBandwidth": 2289,
"ProcedureStepDescription": "Head32$ PS23a",
"ProtocolName": "task-fmri_acq-mb2",
"PulseSequenceDetails": "%SiemensSeq%\\ep2d_bold",
"PulseSequenceName": "*epfid2d1_84",
"ReceiveCoilActiveElements": "HEA;HEP",
"ReceiveCoilName": "Head_32",
"ReconMatrixPE": 84,
"RefLinesPE": 23,
"RepetitionTime": 2,
"ScanOptions": "FS",
"ScanningSequence": "EP",
"SequenceVariant": "SK",
"SeriesDescription": "task-fmri_acq-mb2",
"SeriesNumber": 10,
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"SoftwareVersions": "syngo MR XA30",
"SpacingBetweenSlices": 2.5,
"StationName": "AWP167119",
"TaskName": "MID",
"TotalReadoutTime": 0.0414992,
"TxRefAmp": 264.238,
"dataset": "<unset>",
"datatype": "func",
"extension": ".nii.gz",
"modality": "bold",
"subject": "05",
"suffix": "bold",
"task": "MID"
},
"dummy_trs": 0,
"dvars_nstd": 29.01064150275253,
"dvars_std": 1.0440659063888886,
"dvars_vstd": 0.906755555833333,
"efc": 0.5184,
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"fd_mean": 0.10443711783783817,
"fd_num": 15,
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"fwhm_avg": 3.4378306666666667,
"fwhm_x": 3.22204,
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"gcor": 0.00273819,
"gsr_x": 0.006708856206387281,
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"provenance": {
"md5sum": "0d687b4cee2f5566f124e5f02f4f99a4",
"settings": {
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"testing": false
},
"software": "mriqc",
"version": "24.1.0.dev0+gd5b13cb5.d20240826"
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"size_t": 397,
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}