Felix Hoffstaedter
90ea8304f4
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0019 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "2d58dd48-4166-4dc3-9cd1-64f3d0665a8c",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-0019",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
70 lines
1.8 KiB
(Stored with Git Annex)
JSON
70 lines
1.8 KiB
(Stored with Git Annex)
JSON
{
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"aor": 0.0001581197877179682,
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"aqi": 0.020809013495072023,
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"bids_meta": {
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"FileSize": 0.6169925658032298,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1322,
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"acquisition": "mb8",
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"dataset": "<unset>",
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"datatype": "func",
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"extension": ".nii.gz",
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"modality": "bold",
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"run": 2,
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"session": "04",
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"subject": "0019",
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"suffix": "bold",
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"task": "fractional"
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},
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"dummy_trs": 3,
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"dvars_nstd": 36.78199687594082,
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"dvars_std": 1.1805259925037932,
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"dvars_vstd": 0.974693335819423,
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"efc": 0.4526,
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"fber": 5497.2778,
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"fd_mean": 0.06386573284313997,
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"fd_num": 3,
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"fd_perc": 0.22744503411675512,
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"fwhm_avg": 2.300382110071276,
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"fwhm_x": 2.258898673416386,
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"fwhm_y": 2.4956662132259533,
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"fwhm_z": 2.146581443571489,
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"gcor": 0.00405301,
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"gsr_x": -0.017870066687464714,
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"gsr_y": 0.017695967108011246,
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"provenance": {
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"md5sum": "3897809a8489bb1bd80b18368571a942",
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"settings": {
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"fd_thres": 0.2,
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826"
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},
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"size_t": 1319,
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"size_x": 82,
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"size_y": 82,
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"size_z": 56,
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"snr": 4.014542606756985,
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"spacing_tr": 0.46000000834465027,
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"spacing_x": 2.682926893234253,
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"spacing_y": 2.682926893234253,
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"spacing_z": 2.700000047683716,
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"summary_bg_k": 39.5558,
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"summary_bg_mad": 44.1431,
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"summary_bg_mean": 172.8377,
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"summary_bg_median": 51.0,
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"summary_bg_n": 308939.0,
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"summary_bg_p05": 15.0,
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"summary_bg_p95": 752.0,
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"summary_bg_stdv": 356.8204,
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"summary_fg_k": 2.6688,
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"summary_fg_mad": 528.4369,
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"summary_fg_mean": 3557.0719,
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"summary_fg_median": 3752.0,
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"summary_fg_n": 67605.0,
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"summary_fg_p05": 1247.0,
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"summary_fg_p95": 4622.0,
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"summary_fg_stdv": 934.5952,
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"tsnr": 43.58275621198118
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}
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