Felix Hoffstaedter
b4bcf2976c
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0123 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "2d58dd48-4166-4dc3-9cd1-64f3d0665a8c",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-0123",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
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2.3 KiB
(Stored with Git Annex)
JSON
1 line
No EOL
2.3 KiB
(Stored with Git Annex)
JSON
{"command": "singularity exec -W /tmp/singtmp.gE0Vxc -B /var/lib/condor/execute/dir_3279197/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.gE0Vxc/tmp:/tmp -B /tmp/singtmp.gE0Vxc/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_3279197/ds -H /var/lib/condor/execute/dir_3279197/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_3279197/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0123 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports", "system": {"cpu_total": 32, "memory_total": 540707704832, "hostname": "cpu28", "uid": 38602, "user": null}, "env": {}, "gpu": null, "duct_version": "0.16.0", "schema_version": "0.2.2", "execution_summary": {"exit_code": 0, "command": "singularity exec -W /tmp/singtmp.gE0Vxc -B /var/lib/condor/execute/dir_3279197/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.gE0Vxc/tmp:/tmp -B /tmp/singtmp.gE0Vxc/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_3279197/ds -H /var/lib/condor/execute/dir_3279197/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_3279197/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0123 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports", "logs_prefix": "logs/duct/sub-0123_2025.09.17T22.57.56-3338661_", "wall_clock_time": 51117.79901099205, "peak_rss": 11255144448, "average_rss": 2014176178.839028, "peak_vsz": 16187691008, "average_vsz": 4722668465.1253, "peak_pmem": 2.0, "average_pmem": 0.2381155600184097, "peak_pcpu": 312.6, "average_pcpu": 90.12113509895057, "num_samples": 47802, "num_reports": 853, "start_time": 1758142676.4141085, "end_time": 1758193794.2131195, "working_directory": "/var/lib/condor/execute/dir_3279197/ds"}, "output_paths": {"stdout": "logs/duct/sub-0123_2025.09.17T22.57.56-3338661_stdout", "stderr": "logs/duct/sub-0123_2025.09.17T22.57.56-3338661_stderr", "usage": "logs/duct/sub-0123_2025.09.17T22.57.56-3338661_usage.json", "info": "logs/duct/sub-0123_2025.09.17T22.57.56-3338661_info.json", "prefix": "logs/duct/sub-0123_2025.09.17T22.57.56-3338661_"}, "working_directory": "/var/lib/condor/execute/dir_3279197/ds", "message": ""} |