Felix Hoffstaedter
73782ef499
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0109 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "2d58dd48-4166-4dc3-9cd1-64f3d0665a8c",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-0109",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
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2.3 KiB
(Stored with Git Annex)
JSON
1 line
No EOL
2.3 KiB
(Stored with Git Annex)
JSON
{"command": "singularity exec -W /tmp/singtmp.cYZCKn -B /var/lib/condor/execute/dir_2728625/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.cYZCKn/tmp:/tmp -B /tmp/singtmp.cYZCKn/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_2728625/ds -H /var/lib/condor/execute/dir_2728625/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_2728625/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0109 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports", "system": {"cpu_total": 32, "memory_total": 540707663872, "hostname": "cpu23", "uid": 38602, "user": null}, "env": {}, "gpu": null, "duct_version": "0.16.0", "schema_version": "0.2.2", "execution_summary": {"exit_code": 0, "command": "singularity exec -W /tmp/singtmp.cYZCKn -B /var/lib/condor/execute/dir_2728625/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.cYZCKn/tmp:/tmp -B /tmp/singtmp.cYZCKn/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_2728625/ds -H /var/lib/condor/execute/dir_2728625/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_2728625/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0109 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports", "logs_prefix": "logs/duct/sub-0109_2025.09.17T23.31.25-2839373_", "wall_clock_time": 92794.24827980995, "peak_rss": 13670584320, "average_rss": 2123423901.1745949, "peak_vsz": 19246587904, "average_vsz": 4794360848.649449, "peak_pmem": 2.4, "average_pmem": 0.23922111184797185, "peak_pcpu": 311.8, "average_pcpu": 91.30902032975851, "num_samples": 87458, "num_reports": 1548, "start_time": 1758144685.3151042, "end_time": 1758237479.563384, "working_directory": "/var/lib/condor/execute/dir_2728625/ds"}, "output_paths": {"stdout": "logs/duct/sub-0109_2025.09.17T23.31.25-2839373_stdout", "stderr": "logs/duct/sub-0109_2025.09.17T23.31.25-2839373_stderr", "usage": "logs/duct/sub-0109_2025.09.17T23.31.25-2839373_usage.json", "info": "logs/duct/sub-0109_2025.09.17T23.31.25-2839373_info.json", "prefix": "logs/duct/sub-0109_2025.09.17T23.31.25-2839373_"}, "working_directory": "/var/lib/condor/execute/dir_2728625/ds", "message": ""} |