Felix Hoffstaedter
c54fb52bd9
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0004 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "2d58dd48-4166-4dc3-9cd1-64f3d0665a8c",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-0004",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
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2.3 KiB
(Stored with Git Annex)
JSON
1 line
No EOL
2.3 KiB
(Stored with Git Annex)
JSON
{"command": "singularity exec -W /tmp/singtmp.Kl2KZK -B /var/lib/condor/execute/dir_2728623/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.Kl2KZK/tmp:/tmp -B /tmp/singtmp.Kl2KZK/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_2728623/ds -H /var/lib/condor/execute/dir_2728623/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_2728623/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0004 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports", "system": {"cpu_total": 32, "memory_total": 540707663872, "hostname": "cpu23", "uid": 38602, "user": null}, "env": {}, "gpu": null, "duct_version": "0.16.0", "schema_version": "0.2.2", "execution_summary": {"exit_code": 0, "command": "singularity exec -W /tmp/singtmp.Kl2KZK -B /var/lib/condor/execute/dir_2728623/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.Kl2KZK/tmp:/tmp -B /tmp/singtmp.Kl2KZK/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_2728623/ds -H /var/lib/condor/execute/dir_2728623/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_2728623/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-0004 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports", "logs_prefix": "logs/duct/sub-0004_2025.09.17T23.11.10-2805928_", "wall_clock_time": 71563.26409864426, "peak_rss": 12320964608, "average_rss": 2143513183.1494954, "peak_vsz": 17525547008, "average_vsz": 4809620204.569267, "peak_pmem": 2.1, "average_pmem": 0.2423437476786851, "peak_pcpu": 312.8, "average_pcpu": 91.00805960392864, "num_samples": 67311, "num_reports": 1194, "start_time": 1758143470.2186606, "end_time": 1758215033.4827592, "working_directory": "/var/lib/condor/execute/dir_2728623/ds"}, "output_paths": {"stdout": "logs/duct/sub-0004_2025.09.17T23.11.10-2805928_stdout", "stderr": "logs/duct/sub-0004_2025.09.17T23.11.10-2805928_stderr", "usage": "logs/duct/sub-0004_2025.09.17T23.11.10-2805928_usage.json", "info": "logs/duct/sub-0004_2025.09.17T23.11.10-2805928_info.json", "prefix": "logs/duct/sub-0004_2025.09.17T23.11.10-2805928_"}, "working_directory": "/var/lib/condor/execute/dir_2728623/ds", "message": ""} |