Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0111/figures/sub-0111_ses-01_task-social_acq-mb8_run-02_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0111/ses-01/func/sub-0111_ses-01_task-social_acq-mb8_run-02_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum0d01cc7095790b1b78f7494dae3bc72c

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime15:15:13.915000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.998744, -0.0207963, -0.0455935, 0.0242343, 0.996798, 0.0761982]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-02_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0750248
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-02_task-social_acq-ap-mb8
SeriesNumber14
ShimSetting[4206, -7743, -7258, 264, -92, 140, 121, 104]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp219.974
WipMemBlock33fb1dbe-a506-4401-af80-01cd098ce2e6||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.679556131362915, 0.06501895189285278, -0.11842966824769974, 109.1294174194336], [0.05579505115747452, 2.6743364334106445, 0.20845991373062134, -100.5362548828125], [-0.12232393026351929, -0.20443414151668549, 2.6893343925476074, -59.7269172668457], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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10189.0, 10191.0, 10181.0, 10196.0, 10197.0, 10188.0, 10201.0, 10223.0, 10228.0, 10250.0, 10257.0, 10242.0, 10255.0, 10274.0, 10265.0, 10280.0, 10276.0, 10310.0, 10274.0, 10292.0, 10264.0, 10226.0, 10215.0, 10223.0, 10223.0, 10236.0, 10204.0, 10208.0, 10210.0, 10227.0, 10225.0, 10239.0, 10293.0, 10276.0, 10277.0, 10266.0, 10287.0, 10309.0, 10291.0, 10286.0, 10277.0, 10289.0, 10271.0, 10273.0, 10268.0, 10253.0, 10268.0, 10246.0, 10253.0, 10231.0, 10216.0, 10211.0, 10212.0, 10211.0, 10214.0, 10215.0, 10208.0, 10209.0, 10194.0, 10210.0, 10189.0, 10165.0, 10209.0, 10208.0, 10214.0, 10249.0, 10227.0, 10275.0, 10298.0, 10272.0, 10297.0, 10301.0, 10294.0, 10295.0, 10273.0, 10314.0, 10255.0, 10282.0, 10253.0, 10289.0, 10250.0, 10234.0, 10247.0, 10238.0, 10252.0, 10266.0, 10269.0, 10251.0, 10281.0, 10266.0, 10276.0, 10264.0, 10246.0, 10259.0, 10244.0, 10226.0, 10225.0, 10240.0, 10259.0, 10237.0, 10218.0, 10232.0, 10220.0, 10217.0, 10222.0, 10202.0, 10206.0, 10219.0, 10218.0, 10197.0, 10245.0, 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aor0.0002873938002296211
aqi0.0236192822043628
dummy_trs1
dvarsnstd35.29068258648276
dvarsstd1.1754308331494268
dvarsvstd0.9871177616666647
efc0.4888
fber5788.2241
fdmean0.08403989906751266
fdnum53
fdperc6.0849598163031
fwhmavg2.5791173609605687
fwhmx2.499594758586835
fwhmy2.838668477775415
fwhmz2.3990888465194553
gcor0.0246324
gsrx-0.01502648089081049
gsry0.031960733234882355
sizet871
sizex82
sizey82
sizez56
snr4.003658464682314
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk30.207
summarybgmad47.079
summarybgmean188.6365
summarybgmedian53.0
summarybgn292976.0
summarybgp0516.0
summarybgp95867.0
summarybgstdv362.4688
summaryfgk2.5318
summaryfgmad586.4839
summaryfgmean3834.3048
summaryfgmedian4051.5
summaryfgn83568.0
summaryfgp051348.0
summaryfgp954978.0
summaryfgstdv1011.9434
tsnr41.0276376879774
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