Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0092/figures/sub-0092_ses-04_task-social_acq-mb8_run-02_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0092/ses-04/func/sub-0092_ses-04_task-social_acq-mb8_run-02_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum1af1558e4aa5dd661c7bd46da5364dd9

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime20:04:31.045000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.998841, -0.048119, 0.000890384, 0.0478031, 0.994087, 0.0974989]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-02_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0907191
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-02_task-social_acq-ap-mb8
SeriesNumber14
ShimSetting[4142, -7750, -7206, 686, -45, -94, 83, 72]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp235.217
WipMemBlock3200d1b5-82ac-407a-ba8a-99aa2dd47bab||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.6798179149627686, 0.12825210392475128, 0.015057005919516087, 103.1296157836914], [0.1290997713804245, 2.667062520980835, 0.2628270387649536, -109.15461730957031], [0.00238883588463068, -0.2615824043750763, 2.6871352195739746, -35.36450958251953], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aqi0.02376945894495413
dummy_trs0
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dvarsvstd1.0863979941216984
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fber6465.5493
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fdnum92
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fwhmavg2.450589071973706
fwhmx2.3736502161350415
fwhmy2.697576299321133
fwhmz2.2805407004649427
gcor0.0108949
gsrx-0.020166844129562378
gsry0.025372155010700226
sizet872
sizex82
sizey82
sizez56
snr3.9399728844973754
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk39.3053
summarybgmad39.8177
summarybgmean183.7359
summarybgmedian48.0
summarybgn301115.0
summarybgp0516.0
summarybgp95880.0
summarybgstdv374.135
summaryfgk2.4737
summaryfgmad568.4933
summaryfgmean3629.0283
summaryfgmedian3821.0
summaryfgn75429.0
summaryfgp051245.0
summaryfgp954758.0
summaryfgstdv969.7972
tsnr38.76599889015779
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