Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0068/figures/sub-0068_ses-01_task-social_acq-mb8_run-02_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0068/ses-01/func/sub-0068_ses-01_task-social_acq-mb8_run-02_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum9a41b797f955e60c2137e5492918189d

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime16:48:44.087500
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999148, 0.0131509, 0.0391276, -0.0160448, 0.997085, 0.074589]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-02_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0911055
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-02_task-social_acq-ap-mb8
SeriesNumber14
ShimSetting[4145, -7782, -7261, 524, -67, -231, 64, 70]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp249.475
WipMemBlocka30d4a6f-5d4e-45d5-ab89-99d16af3b660||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.68064022064209, -0.04304691404104233, 0.10268820077180862, 113.8595962524414], [-0.035282962024211884, 2.675107002258301, 0.2029137909412384, -96.42373657226562], [0.10497656464576721, -0.20011693239212036, 2.6904053688049316, -53.184967041015625], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.0002513808975834293
aqi0.022679436133486768
dummy_trs3
dvarsnstd38.40652983527653
dvarsstd1.1645850252534553
dvarsvstd0.9703671248732711
efc0.4884
fber5139.8237
fdmean0.10360454157699765
fdnum25
fdperc2.8768699654775602
fwhmavg2.477542861405641
fwhmx2.425291578540179
fwhmy2.7505259344223516
fwhmz2.2568110712543934
gcor0.00722559
gsrx-0.02152395434677601
gsry0.03565356880426407
sizet869
sizex82
sizey82
sizez56
snr3.7070858372634543
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk32.7932
summarybgmad48.1547
summarybgmean206.4151
summarybgmedian53.0
summarybgn297163.0
summarybgp0516.0
summarybgp95968.0
summarybgstdv397.1345
summaryfgk2.0888
summaryfgmad604.4275
summaryfgmean3572.4605
summaryfgmedian3785.0
summaryfgn79381.0
summaryfgp051064.0
summaryfgp954760.0
summaryfgstdv1021.0112
tsnr38.98825821094215
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