Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0064/figures/sub-0064_ses-01_task-social_acq-mb8_run-02_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0064/ses-01/func/sub-0064_ses-01_task-social_acq-mb8_run-02_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum15235799fd904f814c0736d26850400c

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime09:18:14.062500
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999979, 0.00277927, -0.00588939, -0.00226886, 0.996381, 0.0849663]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-02_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0895572
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-02_task-social_acq-ap-mb8
SeriesNumber14
ShimSetting[4131, -7733, -7215, 631, -88, -92, -16, 128]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp220.272
WipMemBlock48c3364b-fe30-42d0-8587-e22fe93947a0||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.6828699111938477, -0.0060871965251863, -0.016481388360261917, 110.96304321289062], [-0.007456585299223661, 2.673218011856079, 0.2293679565191269, -95.1138916015625], [-0.01580079272389412, -0.22795826196670532, 2.6901893615722656, -44.75593185424805], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.0017300114678899085
aqi0.03544568600917431
dummy_trs0
dvarsnstd38.86028719205515
dvarsstd1.257892536647533
dvarsvstd0.9953131822502871
efc0.4433
fber8906.9082
fdmean0.1440307907771711
fdnum158
fdperc18.119266055045873
fwhmavg2.404998056166782
fwhmx2.338129307891017
fwhmy2.624901937417461
fwhmz2.2519629231918668
gcor0.0164117
gsrx-0.009197328239679337
gsry0.025836540386080742
sizet872
sizex82
sizey82
sizez56
snr3.9206900859703704
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk34.2082
summarybgmad33.4232
summarybgmean149.8546
summarybgmedian41.0
summarybgn307014.0
summarybgp0514.0
summarybgp95707.0
summarybgstdv328.2718
summaryfgk2.4808
summaryfgmad572.2617
summaryfgmean3630.596
summaryfgmedian3826.0
summaryfgn69530.0
summaryfgp051257.0
summaryfgp954772.0
summaryfgstdv975.8416
tsnr34.713637702632695
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