Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0057/figures/sub-0057_ses-04_task-social_acq-mb8_run-05_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0057/ses-04/func/sub-0057_ses-04_task-social_acq-mb8_run-05_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sumbecc32b4b1a831ea5826d7ea0f0361b2

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime13:39:55.335000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999627, 0.0227948, -0.0150156, -0.0214628, 0.99627, 0.0835769]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-05_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.109458
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-05_task-social_acq-ap-mb8
SeriesNumber20
ShimSetting[4138, -7776, -7233, 630, -4, -113, -19, 78]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp250.651
WipMemBlock451ebb95-d742-432a-b7ac-5e0a8d54c56e||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.68192720413208, -0.05758320540189743, -0.04553481563925743, 114.26242065429688], [-0.06115682050585747, 2.672919988632202, 0.2247033417224884, -82.66568756103516], [-0.04028584435582161, -0.22423066198825836, 2.6902480125427246, -61.64329147338867], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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'slices': {}}

aor0.002080230149597238
aqi0.030082956846950514
dummy_trs3
dvarsnstd39.83567359157837
dvarsstd1.1660594619124436
dvarsvstd1.023918534827189
efc0.487
fber3676.0745
fdmean0.10519747085843771
fdnum49
fdperc5.638665132336018
fwhmavg2.4798784294782563
fwhmx2.4817187590130323
fwhmy2.590901756409907
fwhmz2.3670147730118294
gcor0.0111102
gsrx-0.008059085346758366
gsry0.026131900027394295
sizet869
sizex82
sizey82
sizez56
snr4.127336699110325
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk25.4028
summarybgmad46.986
summarybgmean154.963
summarybgmedian50.0
summarybgn298315.0
summarybgp0514.0
summarybgp95657.0
summarybgstdv280.3419
summaryfgk2.9206
summaryfgmad421.5727
summaryfgmean2882.2934
summaryfgmedian3023.0
summaryfgn78229.0
summaryfgp051128.0
summaryfgp953757.0
summaryfgstdv732.4289
tsnr35.446683921152726
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