Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0051/figures/sub-0051_ses-02_task-faces_acq-mb8_run-02_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0051/ses-02/func/sub-0051_ses-02_task-faces_acq-mb8_run-02_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum7e87d6e495c1b683dcf10f3e6fdcb25b

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime09:34:8.200000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.99867, -0.0515458, 0.000873232, 0.0493672, 0.961068, 0.271867]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-02_task-faces_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.102837
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-02_task-faces_acq-ap-mb8
SeriesNumber18
ShimSetting[4137, -7790, -7247, 576, -43, -43, 34, 128]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamefaces
TotalReadoutTime0.03969
TxRefAmp255.414
WipMemBlock17f2bd21-e0fa-45f6-8081-fd45a76b566d||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.679359197616577, 0.13244864344596863, 0.040102582424879074, 104.74362182617188], [0.13829351961612701, 2.578474760055542, 0.7329473495483398, -112.6554183959961], [0.0023428178392350674, -0.729398250579834, 2.5983033180236816, -14.150423049926758], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 914]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.007258796498905908
aqi0.0794442409190372
dummy_trs0
dvarsnstd47.739833672990166
dvarsstd1.2437536055312157
dvarsvstd1.0403695022562984
efc0.5005
fber5856.8169
fdmean0.33927975712251995
fdnum470
fdperc51.42231947483589
fwhmavg2.504467360365538
fwhmx2.3514282166648552
fwhmy2.8260553871670435
fwhmz2.335918477264714
gcor0.0190907
gsrx-0.0068806735798716545
gsry0.04544219374656677
sizet914
sizex82
sizey82
sizez56
snr4.131435419408396
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk17.1162
summarybgmad55.2342
summarybgmean235.0712
summarybgmedian57.0
summarybgn292937.0
summarybgp0515.0
summarybgp951107.0
summarybgstdv426.6025
summaryfgk2.9945
summaryfgmad613.3365
summaryfgmean4155.2491
summaryfgmedian4365.0
summaryfgn83607.0
summaryfgp051574.0
summaryfgp955359.0
summaryfgstdv1056.5272
tsnr23.083797849249095
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