Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0044/figures/sub-0044_ses-01_task-social_acq-mb8_run-05_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0044/ses-01/func/sub-0044_ses-01_task-social_acq-mb8_run-05_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum267fc98f634b923171b24fea86099b8a

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime14:21:31.205000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999228, -0.0346096, -0.0185851, 0.0361161, 0.995465, 0.0880068]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-05_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0975637
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-05_task-social_acq-ap-mb8
SeriesNumber22
ShimSetting[4147, -7709, -7251, 430, -15, -21, 56, 74]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.3775, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp228.908
WipMemBlock07cceee0-15fb-47c0-87dc-7aed792e56af||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
dcmmetaaffine[[-2.6808559894561768, 0.09689684957265854, -0.04172822833061218, 109.320556640625], [0.09285493195056915, 2.670759677886963, 0.23924711346626282, -99.86251068115234], [-0.04986235499382019, -0.2361156940460205, 2.6890554428100586, -45.272769927978516], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.0007338523644752019
aqi0.017948166320645904
dummy_trs5
dvarsnstd39.49931911605086
dvarsstd1.2399255186258678
dvarsvstd1.0027446611085453
efc0.4859
fber5170.979
fdmean0.07151286636761775
fdnum16
fdperc1.845444059976932
fwhmavg2.403745618448865
fwhmx2.367626943551375
fwhmy2.6097692105055263
fwhmz2.233840701289694
gcor0.0174094
gsrx-0.013996132649481297
gsry0.027869263663887978
sizet867
sizex82
sizey82
sizez56
snr3.797571469199396
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk34.683
summarybgmad55.6326
summarybgmean204.8777
summarybgmedian58.0
summarybgn295482.0
summarybgp0515.0
summarybgp95913.0
summarybgstdv393.0485
summaryfgk2.3862
summaryfgmad684.1225
summaryfgmean3933.4898
summaryfgmedian4137.0
summaryfgn81062.0
summaryfgp051268.0
summaryfgp955218.0
summaryfgstdv1089.3737
tsnr42.230856999987736
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