Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0014/figures/sub-0014_ses-04_task-social_acq-mb8_run-01_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0014/ses-04/func/sub-0014_ses-04_task-social_acq-mb8_run-01_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum21fb5df2049e7973dc63320d6d0a31ac

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime15:51:33.975000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.998139, 0.0506942, 0.0339003, -0.0489917, 0.997582, -0.0492936]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-01_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0937489
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-01_task-social_acq-ap-mb8
SeriesNumber12
ShimSetting[4151, -7758, -7264, 525, -85, -68, 56, 47]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp250.826
WipMemBlock6c3c0c2d-4688-41b2-b9f4-6eae68f737cf||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
dcmmetaaffine[[-2.6779332160949707, -0.1314411610364914, 0.09805664420127869, 115.45708465576172], [-0.13600872457027435, 2.6764397621154785, -0.1283607929944992, -81.21988677978516], [0.09095215052366257, 0.13225118815898895, 2.6951637268066406, -81.46595001220703], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.0006010253456221198
aqi0.024611631221198155
dummy_trs4
dvarsnstd38.26437513890423
dvarsstd1.1613005374394478
dvarsvstd0.989609880865052
efc0.5056
fber3554.4395
fdmean0.09347621455040339
fdnum28
fdperc3.225806451612903
fwhmavg2.713713648875666
fwhmx2.7005730265224126
fwhmy2.953352929586579
fwhmz2.4872149905180043
gcor0.0140862
gsrx-0.01183963380753994
gsry0.027461793273687363
sizet868
sizex82
sizey82
sizez56
snr3.5455245371416293
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.6999998092651367
summarybgk16.4656
summarybgmad56.2262
summarybgmean231.7863
summarybgmedian58.0
summarybgn296531.0
summarybgp0515.0
summarybgp951187.0
summarybgstdv421.6104
summaryfgk1.8028
summaryfgmad549.2154
summaryfgmean3238.6612
summaryfgmedian3472.0
summaryfgn80013.0
summaryfgp05815.0
summaryfgp954337.0
summaryfgstdv979.2566
tsnr35.165089424932376
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