Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0010/figures/sub-0010_ses-03_task-social_acq-mb8_run-06_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0010/ses-03/func/sub-0010_ses-03_task-social_acq-mb8_run-06_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sumfb6b5d04d5170920f204011baef25f54

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime15:47:41.205000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999779, 0.0133024, 0.0162514, -0.0139605, 0.999058, 0.0410794]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-06_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0725047
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-06_task-social_acq-ap-mb8
SeriesNumber20
ShimSetting[4165, -7731, -7300, 622, -54, -17, 28, 84]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp227.279
WipMemBlock3c681dd4-96cd-4b41-a8ec-703e605db1b4||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
dcmmetaaffine[[-2.682335138320923, -0.03745506703853607, 0.04236191138625145, 110.38511657714844], [-0.035689301788806915, 2.6804006099700928, 0.11150258034467697, -85.02178955078125], [0.04360119625926018, -0.11021311581134796, 2.697364091873169, -54.23923110961914], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.004571297359357061
aqi0.04544060528128588
dummy_trs1
dvarsnstd38.82520830437927
dvarsstd1.2802268021379295
dvarsvstd1.0476517906321863
efc0.4854
fber8064.5044
fdmean0.13054281948669133
fdnum118
fdperc13.54764638346728
fwhmavg2.3779270455186996
fwhmx2.301341126949934
fwhmy2.6145289376647725
fwhmz2.2179110719413924
gcor0.00817249
gsrx-0.011404733173549175
gsry0.04484773054718971
sizet871
sizex82
sizey82
sizez56
snr4.283778956882912
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk17.7259
summarybgmad37.3987
summarybgmean188.2506
summarybgmedian44.0
summarybgn295487.0
summarybgp0515.0
summarybgp95932.0
summarybgstdv380.0855
summaryfgk3.1391
summaryfgmad503.4716
summaryfgmean3749.3954
summaryfgmedian3924.0
summaryfgn81057.0
summaryfgp051518.0
summaryfgp954815.0
summaryfgstdv916.008
tsnr32.6097823723685
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