Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0132/figures/sub-0132_ses-03_task-social_acq-mb8_run-02_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0132/ses-03/func/sub-0132_ses-03_task-social_acq-mb8_run-02_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum11e228d777f994c20230bcc585973dc6

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime18:42:7.807500
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.998769, 0.0101333, -0.0485635, -0.0099364, 0.999941, 0.00429369]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-02_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0688445
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-02_task-social_acq-ap-mb8
SeriesNumber10
ShimSetting[4211, -7734, -7224, 326, -60, -4, 49, 142]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875, 0, 0.25, 0.0625, 0.3125, 0.125, 0.375, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp222.594
WipMemBlock0eee8863-9bfe-4774-90dd-fc4250dc4826||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.6796233654022217, -0.02665862813591957, -0.1312311440706253, 118.07454681396484], [-0.027186831459403038, 2.682769775390625, 0.010275820270180702, -106.09562683105469], [-0.13029220700263977, -0.011519662104547024, 2.696789503097534, -63.600826263427734], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.002092439585730725
aqi0.02584771254315305
dummy_trs3
dvarsnstd38.838805141658945
dvarsstd1.2418311844700467
dvarsvstd1.031097126440093
efc0.4437
fber8366.8848
fdmean0.15030193394366753
fdnum171
fdperc19.677790563866512
fwhmavg2.3280157537570636
fwhmx2.256893400736923
fwhmy2.5200761217348853
fwhmz2.2070777387993825
gcor0.0121587
gsrx-0.017936453223228455
gsry0.02944188192486763
sizet869
sizex82
sizey82
sizez56
snr4.023945144003561
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk36.5798
summarybgmad30.4795
summarybgmean144.0362
summarybgmedian39.0
summarybgn308142.0
summarybgp0514.0
summarybgp95673.0
summarybgstdv304.8291
summaryfgk2.4714
summaryfgmad537.7955
summaryfgmean3422.829
summaryfgmedian3594.0
summaryfgn68402.0
summaryfgp051271.0
summaryfgp954479.0
summaryfgstdv893.1468
tsnr37.7390572745353
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