Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0131/figures/sub-0131_ses-01_task-social_acq-mb8_run-06_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0131/ses-01/func/sub-0131_ses-01_task-social_acq-mb8_run-06_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum2a517b39102bc188a31745ecf50d13ec

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime18:24:53.195000
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.997595, 0.0672646, -0.016696, -0.0662602, 0.996297, 0.0547839]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-06_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.0880239
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-06_task-social_acq-ap-mb8
SeriesNumber26
ShimSetting[4211, -8138, -7339, 618, -229, -981, 794, 116]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp232.369
WipMemBlock377e465a-b842-47f7-a198-20917788a0ec||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.676475763320923, -0.17777137458324432, -0.05486191436648369, 122.99714660644531], [-0.18046613037586212, 2.672992706298828, 0.1445738971233368, -98.4102783203125], [-0.044794220477342606, -0.14698119461536407, 2.695568323135376, -61.668800354003906], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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'slices': {}}

aor0.0005682663605051664
aqi0.02290375729047072
dummy_trs1
dvarsnstd31.76841445356324
dvarsstd1.0349600579655178
dvarsvstd0.9452437951379296
efc0.4701
fber4793.1475
fdmean0.08823079703266154
fdnum27
fdperc3.0998851894374284
fwhmavg3.1672412603450346
fwhmx3.103562016914406
fwhmy3.538717370175858
fwhmz2.8594443939448393
gcor0.0127345
gsrx0.0015652389265596867
gsry0.01770349219441414
sizet871
sizex82
sizey82
sizez56
snr3.6629610672490984
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk51.6481
summarybgmad48.3676
summarybgmean174.5444
summarybgmedian56.0
summarybgn298956.0
summarybgp0517.0
summarybgp95783.0
summarybgstdv366.1802
summaryfgk1.2441
summaryfgmad647.9234
summaryfgmean3615.687
summaryfgmedian3886.0
summaryfgn77588.0
summaryfgp051193.0
summaryfgp954861.0
summaryfgstdv1060.8835
tsnr37.66591952648014
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