Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0091/figures/sub-0091_ses-01_task-social_acq-mb8_run-06_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0091/ses-01/func/sub-0091_ses-01_task-social_acq-mb8_run-06_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sumac9b412c64be5086b23b4853c1a8cf2a

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime21:35:6.992500
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999706, 0.0201503, 0.0134922, -0.0157047, 0.961902, -0.272942]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-06_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.11903
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-06_task-social_acq-ap-mb8
SeriesNumber23
ShimSetting[4171, -7679, -7291, 548, -78, -162, -93, 64]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.1275, 0.3775, 0.19]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp274.136
WipMemBlock9a16334a-ac98-4057-b93c-9d2d9d5516c4||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.682137966156006, -0.042134467512369156, 0.0498906709253788, 112.83476257324219], [-0.05406179279088974, 2.580713987350464, -0.7361533045768738, -68.29856872558594], [0.03619856387376785, 0.7322821617126465, 2.597227096557617, -118.1077880859375], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.005612954022988505
aqi0.04404474057471265
dummy_trs2
dvarsnstd44.86590354940161
dvarsstd1.223693424936709
dvarsvstd1.0637570744764098
efc0.5453
fber2575.3713
fdmean0.19792619213643592
fdnum291
fdperc33.44827586206897
fwhmavg2.36852032745527
fwhmx2.311155035806861
fwhmy2.573413393190498
fwhmz2.2209925533684527
gcor0.00723273
gsrx-0.013832362368702888
gsry0.060882214456796646
sizet870
sizex82
sizey82
sizez56
snr4.679402130186209
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk19.8528
summarybgmad68.6973
summarybgmean243.1424
summarybgmedian67.0
summarybgn283759.0
summarybgp0516.0
summarybgp951084.0
summarybgstdv414.7597
summaryfgk3.9442
summaryfgmad449.9716
summaryfgmean3277.1384
summaryfgmedian3376.0
summaryfgn92785.0
summaryfgp051650.0
summaryfgp954153.0
summaryfgstdv721.4558
tsnr29.82712162192911
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