Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0086/figures/sub-0086_ses-04_task-social_acq-mb8_run-04_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0086/ses-04/func/sub-0086_ses-04_task-social_acq-mb8_run-04_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sum80a50a59fccbb95a189ac84c7dcad322

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime16:48:13.367500
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.999299, -0.0342807, 0.0150419, 0.0345471, 0.999244, -0.0178245]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-04_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.103713
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-04_task-social_acq-ap-mb8
SeriesNumber18
ShimSetting[4140, -7744, -7290, 589, -68, -161, -1, 43]
SliceThickness2.7
SliceTiming[0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19, 0, 0.2525, 0.0625, 0.315, 0.125, 0.3775, 0.19]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp243.703
WipMemBlocke8fb8a74-de05-4b75-9818-5f355a922fd4||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.6810462474823, 0.09268734604120255, 0.03893275558948517, 106.62801361083984], [0.09197256714105606, 2.680898904800415, -0.049495380371809006, -97.31167602539062], [0.04035643860697746, 0.04782172664999962, 2.699265480041504, -80.82166290283203], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.00808279768786127
aqi0.025283237803468205
dummy_trs7
dvarsnstd38.70326162271989
dvarsstd1.2941539385416685
dvarsvstd1.1388366258564806
efc0.4947
fber6039.5967
fdmean0.09694782918765238
fdnum22
fdperc2.5433526011560694
fwhmavg2.4324653059049854
fwhmx2.395544215613048
fwhmy2.5952924835779507
fwhmz2.3065592185239576
gcor0.00941801
gsrx-0.011382510885596275
gsry0.04493814334273338
sizet865
sizex82
sizey82
sizez56
snr4.203132754718788
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk24.3098
summarybgmad37.7095
summarybgmean173.5192
summarybgmedian44.0
summarybgn292609.0
summarybgp0515.0
summarybgp95805.0
summarybgstdv348.1229
summaryfgk3.1492
summaryfgmad515.8189
summaryfgmean3314.0136
summaryfgmedian3417.0
summaryfgn83935.0
summaryfgp051447.0
summaryfgp954355.0
summaryfgstdv812.9602
tsnr35.90240828343667
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