Basic echo-wise reports

Standard deviation of signal through time

The voxel-wise standard deviation of the signal (variability along time).

Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-stdev_bold.svg

View of the background of the voxel-wise average of the BOLD timeseries

This panel shows a mosaic enhancing the background around the head. Artifacts usually unveil themselves in the air surrounding the head, where no signal sources are present.

Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-background_bold.svg

Voxel-wise average of BOLD time-series, zoomed-in covering just the brain

This panel shows a mosaic of the brain. This mosaic is the most suitable to screen head-motion intensity inhomogeneities, global/local noise, signal leakage (for example, from the eyeballs and across the phase-encoding axis), etc.

Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-zoomed_bold.svg

Carpetplot and nuisance signals

The so-called «carpetplot» may assist in assessing head-motion derived artifacts and respiation effects.

Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-carpet_bold.svg

Extended echo-wise reports

Voxel-wise average of BOLD time-series

The average signal calculated across the last axis (time).

Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-mean_bold.svg

Extended reports shared across echos

Brain extraction performance

Brain mask as internally extracted by MRIQC. Defects on the brainmask could indicate problematic aspects of the image quality-wise.

Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-brainmask_bold.svg

Spatial normalization of the anatomical image

This panel shows a quick-and-dirty nonlinear registration into the MNI152NLin2009cAsym template accessed with TemplateFlow.

Problem loading figure sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-norm_bold.svg. If the link below works, please try reloading the report in your browser.
Get figure file: sub-0057/figures/sub-0057_ses-03_task-social_acq-mb8_run-05_desc-norm_bold.svg

About

Errors

Reproducibility and provenance information

Thanks for using MRIQC. The following information may assist in reconstructing the provenance of the corresponding derivatives.

Execution environmentsingularity
Input filename/sub-0057/ses-03/func/sub-0057_ses-03_task-social_acq-mb8_run-05_bold.nii.gz
VersionsMRIQC24.1.0.dev0+gd5b13cb5.d20240826
VersionsNiPype1.8.6
VersionsTemplateFlow24.2.0
md5sumdf7056b630c4cca107e8dc9b92bbc8e9

AcquisitionMatrixPE82
AcquisitionNumber1
AcquisitionTime16:00:39.792500
BandwidthPerPixelPhaseEncode24.888
BaseResolution82
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11E_LATEST_20181129
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.00049
DeviceSerialNumber66112
DwellTime2e-06
EchoTime0.0272
EchoTrainLength82
EffectiveEchoSpacing0.00049
FlipAngle44
ImageCommentsUnaliased MB8/PE3
ImageOrientationPatientDICOM[0.992273, -0.106099, -0.0643224, 0.105868, 0.994355, -0.00699989]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.252
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaynard 3,Hanover,NH,US,03755
InstitutionNameDartmouth College - PBS
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor8
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps82
PhaseResolution1
PixelBandwidth3050
ProcedureStepDescriptionWager_Wager^1076_spacetop
ProtocolNamefunc_run-05_task-social_acq-ap-mb8
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE82
RepetitionTime0.46
SAR0.112319
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_82
SequenceVariantSK\SS
SeriesDescriptionfunc_run-05_task-social_acq-ap-mb8
SeriesNumber16
ShimSetting[4146, -7782, -7203, 622, -7, -159, -90, 32]
SliceThickness2.7
SliceTiming[0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875, 0, 0.25, 0.0625, 0.315, 0.125, 0.3775, 0.1875]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.7
StationNameAWP66112
TaskNamesocial
TotalReadoutTime0.03969
TxRefAmp254.742
WipMemBlockef0b892a-bcec-4003-9a82-cd6c5077121b||Sequence: R016 ve11e/master r/434b28f1; Aug 7 2019 18:53:46 by eja
dcmmetaaffine[[-2.6621956825256348, 0.28403687477111816, -0.17469550669193268, 102.31110382080078], [0.284656822681427, 2.667783260345459, -0.00036746784462593496, -104.79431915283203], [-0.17257235944271088, 0.01878019981086254, 2.6943423748016357, -52.545440673828125], [0.0, 0.0, 0.0, 1.0]]
dcmmetareorient_transform[[0.0, -1.0, 0.0, 81.0], [1.0, 0.0, 0.0, 0.0], [0.0, 0.0, 1.0, 0.0], [0.0, 0.0, 0.0, 1.0]]
dcmmetashape[82, 82, 56, 872]
dcmmetaslice_dim2
dcmmetaversion0.6
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aor0.0013177215189873418
aqi0.028811358573072498
dummy_trs3
dvarsnstd39.81676714319129
dvarsstd1.1737724152304163
dvarsvstd1.0147232815553002
efc0.484
fber3904.019
fdmean0.1275379729387582
fdnum132
fdperc15.189873417721518
fwhmavg2.4723874880222216
fwhmx2.482199577183387
fwhmy2.5660184842758973
fwhmz2.3689444026073807
gcor0.0127006
gsrx-0.007327421568334103
gsry0.030126234516501427
sizet869
sizex82
sizey82
sizez56
snr4.053180720167311
spacingtr0.46000000834465027
spacingx2.682926893234253
spacingy2.682926893234253
spacingz2.700000047683716
summarybgk25.2653
summarybgmad49.378
summarybgmean162.608
summarybgmedian52.0
summarybgn298359.0
summarybgp0514.0
summarybgp95700.0
summarybgstdv301.2638
summaryfgk2.7862
summaryfgmad466.1376
summaryfgmean3094.1712
summaryfgmedian3246.0
summaryfgn78185.0
summaryfgp051177.0
summaryfgp954061.0
summaryfgstdv800.8474
tsnr34.74943333421834
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