install(ok): /var/lib/condor/execute/dir_1300102/ds (dataset) install(ok): /var/lib/condor/execute/dir_1300102/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1300102/ds/sourcedata/raw] ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 00:39:22 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 00:39:22 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_1300102/ds/sub-945652/sub-945652_acq-standard_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-945652/sub-945652_acq-standard_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 51s Affine preprocessing (APP) Initialize 7s Estimate background 6s Initial correction 5s Refine background 3s Final correction 4s Final scaling 5s 36s Correct center-of-mass 5s Affine registration 7s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 6s Use initial fine affine registration. 56s SPM preprocessing 1 (estimate 2): 51s SPM preprocessing 2 (write) Write Segmentation 18s Update Segmentation 13s Update Skull-Stripping 37s Update probability maps 8s 75s Global intensity correction 15s SANLM denoising after intensity normalization (medium) 14s Fast Optimized Shooting registration 6s 94s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 2s Prepare segments (LASmod = 1.00) 11s Estimate local tissue thresholds (WM) 18s Estimate local tissue thresholds (GM) 21s Intensity transformation 0s SANLM denoising after LAS (medium) 23s 80s ROI segmentation (partitioning) Atlas -> subject space 7s Major structures 13s Ventricle detection 12s Blood vessel detection 7s WMH detection (WMHCstr=0.50 > WMHCstr'=0.04) 47s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 2s 93s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 24s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 3s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 10s 5s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 2s ROI estimation of 'cobra' atlas 7s ROI estimation of 'neuromorphometrics' atlas 26s ROI estimation of 'lpba40' atlas 8s ROI estimation of 'hammers' atlas 19s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'suit' atlas 4s ROI estimation of 'ibsr' atlas 6s ROI estimation of 'aal3' atlas 11s ROI estimation of 'mori' atlas 15s ROI estimation of 'anatomy3' atlas 22s ROI estimation of 'julichbrain' atlas 31s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 6s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 18s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 37s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 82s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 143s Write results 147s 444s Quality check 14s /var/lib/condor/execute/dir_1300102/ds/sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 21 minute(s) and 41 second(s). Image Quality Rating (IQR): 87.83% (B+) GM volume (GMV): 49.55% (579.86 / 1170.15 ml) Segmentations are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/mri Reports are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/report Labels are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/label ------------------------------------------------------------------------ 22-Oct-2025 01:01:06 - Done 'CAT12: Segmentation' 22-Oct-2025 01:01:06 - Done Bye for now... get(ok): sourcedata/raw/sub-945652/anat/sub-945652_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...] install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1300102/ds/code/cat12] get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...] run(ok): /var/lib/condor/execute/dir_1300102/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.mat (file) add(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.xml (file) add(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/m0wp1sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/mwp1sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/p0sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/wp0sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.mat (file) add(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.xml (file) add(ok): sub-945652/report/catlog_sub-945652_acq-standard_T1w.txt (file) add(ok): sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 14) get (notneeded: 2, ok: 2) install (ok: 1) run (ok: 1) save (ok: 1) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:02:37 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:02:37 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_1300102/ds/sub-945652/sub-945652_acq-headmotion2_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-945652/sub-945652_acq-headmotion2_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 56s Affine preprocessing (APP) Initialize 9s Estimate background 7s Initial correction 6s Refine background 4s Final correction 6s Final scaling 8s 50s Correct center-of-mass 9s Affine registration 9s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 11s Use initial fine affine registration. 58s SPM preprocessing 1 (estimate 2): 60s SPM preprocessing 2 (write) Write Segmentation 18s Update Segmentation 12s Update Skull-Stripping 37s Update probability maps 8s 75s Global intensity correction 15s SANLM denoising after intensity normalization (medium) 14s Fast Optimized Shooting registration 8s 96s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 2s Prepare segments (LASmod = 1.00) 11s Estimate local tissue thresholds (WM) 18s Estimate local tissue thresholds (GM) 20s Intensity transformation 0s SANLM denoising after LAS (medium) 23s 79s ROI segmentation (partitioning) Atlas -> subject space 7s Major structures 13s Ventricle detection 11s Blood vessel detection 6s WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 51s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 2s 95s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.07) 25s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.06] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 3s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 9s 10s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 2s ROI estimation of 'cobra' atlas 7s ROI estimation of 'neuromorphometrics' atlas 28s ROI estimation of 'lpba40' atlas 8s ROI estimation of 'hammers' atlas 19s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'suit' atlas 4s ROI estimation of 'ibsr' atlas 6s ROI estimation of 'aal3' atlas 10s ROI estimation of 'mori' atlas 13s ROI estimation of 'anatomy3' atlas 19s ROI estimation of 'julichbrain' atlas 27s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 14s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 27s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 65s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 109s Write results 112s 368s Quality check 13s /var/lib/condor/execute/dir_1300102/ds/sub-945652/report/catreport_sub-945652_acq-headmotion2_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 21 minute(s) and 51 second(s). Image Quality Rating (IQR): 83.08% (B-) GM volume (GMV): 48.11% (549.75 / 1142.80 ml) Segmentations are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/mri Reports are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/report Labels are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/label ------------------------------------------------------------------------ 22-Oct-2025 01:24:34 - Done 'CAT12: Segmentation' 22-Oct-2025 01:24:34 - Done Bye for now... get(ok): sourcedata/raw/sub-945652/anat/sub-945652_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.mat (file) unlock(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-945652/mri/m0wp1sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/mri/mwp1sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/mri/p0sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-945652/mri/wp0sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.mat (file) unlock(ok): sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_1300102/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-945652/label/catROI_sub-945652_acq-headmotion2_T1w.mat (file) add(ok): sub-945652/label/catROI_sub-945652_acq-headmotion2_T1w.xml (file) add(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/m0wp1sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/mwp1sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/p0sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/wp0sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/report/cat_sub-945652_acq-headmotion2_T1w.mat (file) add(ok): sub-945652/report/cat_sub-945652_acq-headmotion2_T1w.xml (file) add(ok): sub-945652/report/catlog_sub-945652_acq-headmotion2_T1w.txt (file) add(ok): sub-945652/report/catreport_sub-945652_acq-headmotion2_T1w.pdf (file) add(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/m0wp1sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/mwp1sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/p0sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/wp0sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.mat (file) add(ok): sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 25) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 11) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:26:03 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:26:04 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_1300102/ds/sub-945652/sub-945652_acq-headmotion1_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-945652/sub-945652_acq-headmotion1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 55s Affine preprocessing (APP) Initialize 9s Estimate background 8s Initial correction 6s Refine background 4s Final correction 5s Final scaling 7s 48s Correct center-of-mass 18s Affine registration 12s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 15s Use initial fine affine registration. 61s SPM preprocessing 1 (estimate 2): 83s SPM preprocessing 2 (write) Write Segmentation 19s Update Segmentation 12s Update Skull-Stripping 36s Update probability maps 8s 75s Global intensity correction 15s SANLM denoising after intensity normalization (medium) 13s Fast Optimized Shooting registration 9s 96s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 3s Prepare segments (LASmod = 1.00) 11s Estimate local tissue thresholds (WM) 18s Estimate local tissue thresholds (GM) 20s Intensity transformation 0s SANLM denoising after LAS (medium) 24s 81s ROI segmentation (partitioning) Atlas -> subject space 7s Major structures 13s Ventricle detection 12s Blood vessel detection 6s WMH detection (WMHCstr=0.50 > WMHCstr'=0.02) 55s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 2s 99s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.07) 25s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.06] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 3s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 9s 10s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 2s ROI estimation of 'cobra' atlas 7s ROI estimation of 'neuromorphometrics' atlas 25s ROI estimation of 'lpba40' atlas 7s ROI estimation of 'hammers' atlas 18s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'suit' atlas 4s ROI estimation of 'ibsr' atlas 6s ROI estimation of 'aal3' atlas 10s ROI estimation of 'mori' atlas 13s ROI estimation of 'anatomy3' atlas 19s ROI estimation of 'julichbrain' atlas 25s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 4s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 10s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 20s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 47s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 70s Write results 71s 292s Quality check 11s /var/lib/condor/execute/dir_1300102/ds/sub-945652/report/catreport_sub-945652_acq-headmotion1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 20 minute(s) and 44 second(s). Image Quality Rating (IQR): 84.56% (B) GM volume (GMV): 49.40% (560.66 / 1135.00 ml) Segmentations are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/mri Reports are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/report Labels are saved in /var/lib/condor/execute/dir_1300102/ds/sub-945652/label ------------------------------------------------------------------------ 22-Oct-2025 01:46:52 - Done 'CAT12: Segmentation' 22-Oct-2025 01:46:52 - Done Bye for now... get(ok): sourcedata/raw/sub-945652/anat/sub-945652_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-945652/label/catROI_sub-945652_acq-headmotion2_T1w.mat (file) unlock(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.mat (file) unlock(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-945652/mri/m0wp1sub-945652_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-945652/mri/m0wp1sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/mri/mwp1sub-945652_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-945652/mri/mwp1sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/mri/p0sub-945652_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-945652/mri/p0sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-945652/mri/wp0sub-945652_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-945652/mri/wp0sub-945652_acq-standard_T1w.nii.gz (file) unlock(ok): sub-945652/report/cat_sub-945652_acq-headmotion2_T1w.mat (file) unlock(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.mat (file) unlock(ok): sub-945652/report/catreport_sub-945652_acq-headmotion2_T1w.pdf (file) unlock(ok): sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_1300102/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-945652/label/catROI_sub-945652_acq-headmotion1_T1w.mat (file) add(ok): sub-945652/label/catROI_sub-945652_acq-headmotion1_T1w.xml (file) add(ok): sub-945652/mri/it_sub-945652_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/m0wp1sub-945652_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-945652/mri/mwp1sub-945652_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-945652/mri/p0sub-945652_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-945652/mri/t_sub-945652_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/wp0sub-945652_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-945652/report/cat_sub-945652_acq-headmotion1_T1w.mat (file) add(ok): sub-945652/report/cat_sub-945652_acq-headmotion1_T1w.xml (file) add(ok): sub-945652/report/catlog_sub-945652_acq-headmotion1_T1w.txt (file) add(ok): sub-945652/report/catreport_sub-945652_acq-headmotion1_T1w.pdf (file) add(ok): sub-945652/label/catROI_sub-945652_acq-headmotion2_T1w.mat (file) add(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/m0wp1sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/m0wp1sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/mwp1sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/mwp1sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/p0sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/p0sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-945652/mri/wp0sub-945652_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-945652/mri/wp0sub-945652_acq-standard_T1w.nii.gz (file) add(ok): sub-945652/report/cat_sub-945652_acq-headmotion2_T1w.mat (file) add(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.mat (file) add(ok): sub-945652/report/catreport_sub-945652_acq-headmotion2_T1w.pdf (file) add(ok): sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 36) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 22) copy(ok): sub-945652/label/catROI_sub-945652_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/label/catROI_sub-945652_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/label/catROI_sub-945652_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/it_sub-945652_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/it_sub-945652_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/it_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/it_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/m0wp1sub-945652_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/m0wp1sub-945652_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/m0wp1sub-945652_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/mwp1sub-945652_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/mwp1sub-945652_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/mwp1sub-945652_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/p0sub-945652_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/p0sub-945652_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/p0sub-945652_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/t_sub-945652_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/t_sub-945652_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/t_sub-945652_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/t_sub-945652_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/wp0sub-945652_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/wp0sub-945652_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/mri/wp0sub-945652_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-945652/report/cat_sub-945652_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/report/cat_sub-945652_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/report/cat_sub-945652_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-945652/report/catreport_sub-945652_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-945652/report/catreport_sub-945652_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-945652/report/catreport_sub-945652_acq-standard_T1w.pdf (file) [to catqc_out-storage...] action summary: copy (ok: 33) flock: getting lock took 0.000948 seconds flock: executing git SUCCESS