install(ok): /var/lib/condor/execute/dir_3197453/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3197453/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3197453/ds/sourcedata/raw]
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 00:41:06 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 00:41:06 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_3197453/ds/sub-402511/sub-402511_acq-standard_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-402511/sub-402511_acq-standard_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 71s
Affine preprocessing (APP)
Initialize 9s
Estimate background 8s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 7s
48s
Correct center-of-mass 6s
Affine registration 10s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
88s
SPM preprocessing 1 (estimate 2): 58s
SPM preprocessing 2 (write)
Write Segmentation 24s
Update Segmentation 16s
Update Skull-Stripping 49s
Update probability maps 10s
99s
Global intensity correction 18s
SANLM denoising after intensity normalization (medium) 20s
Fast Optimized Shooting registration 3s
112s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.00) 16s
Estimate local tissue thresholds (WM) 23s
Estimate local tissue thresholds (GM) 28s
Intensity transformation 0s
SANLM denoising after LAS (medium) 30s
108s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 19s
Ventricle detection 20s
Blood vessel detection 10s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.14) 68s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 5s
Final corrections 3s
137s
Apply enhanced blood vessel correction 2s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 35s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
14s
5s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 3s
ROI estimation of 'cobra' atlas 10s
ROI estimation of 'neuromorphometrics' atlas 37s
ROI estimation of 'lpba40' atlas 14s
ROI estimation of 'hammers' atlas 47s
ROI estimation of 'thalamus' atlas 4s
ROI estimation of 'suit' atlas 11s
ROI estimation of 'ibsr' atlas 18s
ROI estimation of 'aal3' atlas 29s
ROI estimation of 'mori' atlas 44s
ROI estimation of 'anatomy3' atlas 61s
ROI estimation of 'julichbrain' atlas 83s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 12s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 35s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 68s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 134s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 181s
Write results 184s
794s
Quality check 17s
/var/lib/condor/execute/dir_3197453/ds/sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 32 minute(s) and 23 second(s).
Image Quality Rating (IQR): 87.94% (B+)
GM volume (GMV): 47.20% (708.96 / 1502.11 ml)
Segmentations are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/mri
Reports are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/report
Labels are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/label
------------------------------------------------------------------------
22-Oct-2025 01:13:31 - Done 'CAT12: Segmentation'
22-Oct-2025 01:13:32 - Done
Bye for now...
get(ok): sourcedata/raw/sub-402511/anat/sub-402511_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...]
install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3197453/ds/code/cat12]
get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...]
run(ok): /var/lib/condor/execute/dir_3197453/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.mat (file)
add(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.xml (file)
add(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/m0wp1sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/mwp1sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/p0sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/wp0sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.mat (file)
add(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.xml (file)
add(ok): sub-402511/report/catlog_sub-402511_acq-standard_T1w.txt (file)
add(ok): sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 14)
get (notneeded: 2, ok: 2)
install (ok: 1)
run (ok: 1)
save (ok: 1)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:14:20 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:14:20 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_3197453/ds/sub-402511/sub-402511_acq-headmotion2_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-402511/sub-402511_acq-headmotion2_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 70s
Affine preprocessing (APP)
Initialize 9s
Estimate background 8s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 7s
47s
Correct center-of-mass 5s
Affine registration 9s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
86s
SPM preprocessing 1 (estimate 2): 66s
SPM preprocessing 2 (write)
Write Segmentation 25s
Update Segmentation 16s
Update Skull-Stripping 47s
Update probability maps 10s
98s
Global intensity correction 18s
SANLM denoising after intensity normalization (medium) 19s
Fast Optimized Shooting registration 9s
116s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.00) 16s
Estimate local tissue thresholds (WM) 23s
Estimate local tissue thresholds (GM) 28s
Intensity transformation 0s
SANLM denoising after LAS (medium) 30s
108s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 19s
Ventricle detection 20s
Blood vessel detection 10s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.14) 63s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 5s
Final corrections 3s
131s
Apply enhanced blood vessel correction 2s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 37s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
14s
11s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 3s
ROI estimation of 'cobra' atlas 11s
ROI estimation of 'neuromorphometrics' atlas 39s
ROI estimation of 'lpba40' atlas 12s
ROI estimation of 'hammers' atlas 37s
ROI estimation of 'thalamus' atlas 4s
ROI estimation of 'suit' atlas 10s
ROI estimation of 'ibsr' atlas 18s
ROI estimation of 'aal3' atlas 30s
ROI estimation of 'mori' atlas 43s
ROI estimation of 'anatomy3' atlas 61s
ROI estimation of 'julichbrain' atlas 84s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 12s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 36s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 60s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 116s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 153s
Write results 156s
731s
Quality check 18s
/var/lib/condor/execute/dir_3197453/ds/sub-402511/report/catreport_sub-402511_acq-headmotion2_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 31 minute(s) and 44 second(s).
Image Quality Rating (IQR): 87.00% (B+)
GM volume (GMV): 46.37% (693.99 / 1496.57 ml)
Segmentations are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/mri
Reports are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/report
Labels are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/label
------------------------------------------------------------------------
22-Oct-2025 01:46:07 - Done 'CAT12: Segmentation'
22-Oct-2025 01:46:07 - Done
Bye for now...
get(ok): sourcedata/raw/sub-402511/anat/sub-402511_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.mat (file)
unlock(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-402511/mri/m0wp1sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/mwp1sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/p0sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-402511/mri/wp0sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.mat (file)
unlock(ok): sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_3197453/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-402511/label/catROI_sub-402511_acq-headmotion2_T1w.mat (file)
add(ok): sub-402511/label/catROI_sub-402511_acq-headmotion2_T1w.xml (file)
add(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/m0wp1sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/mwp1sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/p0sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/wp0sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/report/cat_sub-402511_acq-headmotion2_T1w.mat (file)
add(ok): sub-402511/report/cat_sub-402511_acq-headmotion2_T1w.xml (file)
add(ok): sub-402511/report/catlog_sub-402511_acq-headmotion2_T1w.txt (file)
add(ok): sub-402511/report/catreport_sub-402511_acq-headmotion2_T1w.pdf (file)
add(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/m0wp1sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/mwp1sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/p0sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/wp0sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.mat (file)
add(ok): sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 25)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 11)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:47:02 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:47:02 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_3197453/ds/sub-402511/sub-402511_acq-headmotion1_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-402511/sub-402511_acq-headmotion1_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 69s
Affine preprocessing (APP)
Initialize 8s
Estimate background 8s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 6s
46s
Correct center-of-mass 5s
Affine registration 9s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
85s
SPM preprocessing 1 (estimate 2): 65s
SPM preprocessing 2 (write)
Write Segmentation 23s
Update Segmentation 16s
Update Skull-Stripping 47s
Update probability maps 10s
96s
Global intensity correction 17s
SANLM denoising after intensity normalization (medium) 20s
Fast Optimized Shooting registration 8s
114s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.00) 16s
Estimate local tissue thresholds (WM) 22s
Estimate local tissue thresholds (GM) 27s
Intensity transformation 0s
SANLM denoising after LAS (medium) 31s
107s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 19s
Ventricle detection 17s
Blood vessel detection 10s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.15) 70s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 5s
Final corrections 3s
136s
No enhanced blood vessel correction is required 2s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 38s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
14s
9s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 3s
ROI estimation of 'cobra' atlas 11s
ROI estimation of 'neuromorphometrics' atlas 46s
ROI estimation of 'lpba40' atlas 17s
ROI estimation of 'hammers' atlas 39s
ROI estimation of 'thalamus' atlas 3s
ROI estimation of 'suit' atlas 8s
ROI estimation of 'ibsr' atlas 18s
ROI estimation of 'aal3' atlas 23s
ROI estimation of 'mori' atlas 32s
ROI estimation of 'anatomy3' atlas 45s
ROI estimation of 'julichbrain' atlas 60s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 9s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 25s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 47s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 94s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 131s
Write results 134s
613s
Quality check 15s
/var/lib/condor/execute/dir_3197453/ds/sub-402511/report/catreport_sub-402511_acq-headmotion1_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 29 minute(s) and 30 second(s).
Image Quality Rating (IQR): 87.25% (B+)
GM volume (GMV): 46.49% (696.26 / 1497.73 ml)
Segmentations are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/mri
Reports are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/report
Labels are saved in /var/lib/condor/execute/dir_3197453/ds/sub-402511/label
------------------------------------------------------------------------
22-Oct-2025 02:16:35 - Done 'CAT12: Segmentation'
22-Oct-2025 02:16:35 - Done
Bye for now...
get(ok): sourcedata/raw/sub-402511/anat/sub-402511_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-402511/label/catROI_sub-402511_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.mat (file)
unlock(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-402511/mri/m0wp1sub-402511_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/m0wp1sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/mwp1sub-402511_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/mwp1sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/p0sub-402511_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/p0sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-402511/mri/wp0sub-402511_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-402511/mri/wp0sub-402511_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-402511/report/cat_sub-402511_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.mat (file)
unlock(ok): sub-402511/report/catreport_sub-402511_acq-headmotion2_T1w.pdf (file)
unlock(ok): sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_3197453/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-402511/label/catROI_sub-402511_acq-headmotion1_T1w.mat (file)
add(ok): sub-402511/label/catROI_sub-402511_acq-headmotion1_T1w.xml (file)
add(ok): sub-402511/mri/it_sub-402511_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/m0wp1sub-402511_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-402511/mri/mwp1sub-402511_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-402511/mri/p0sub-402511_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-402511/mri/t_sub-402511_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/wp0sub-402511_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-402511/report/cat_sub-402511_acq-headmotion1_T1w.mat (file)
add(ok): sub-402511/report/cat_sub-402511_acq-headmotion1_T1w.xml (file)
add(ok): sub-402511/report/catlog_sub-402511_acq-headmotion1_T1w.txt (file)
add(ok): sub-402511/report/catreport_sub-402511_acq-headmotion1_T1w.pdf (file)
add(ok): sub-402511/label/catROI_sub-402511_acq-headmotion2_T1w.mat (file)
add(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/m0wp1sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/m0wp1sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/mwp1sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/mwp1sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/p0sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/p0sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-402511/mri/wp0sub-402511_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-402511/mri/wp0sub-402511_acq-standard_T1w.nii.gz (file)
add(ok): sub-402511/report/cat_sub-402511_acq-headmotion2_T1w.mat (file)
add(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.mat (file)
add(ok): sub-402511/report/catreport_sub-402511_acq-headmotion2_T1w.pdf (file)
add(ok): sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 36)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 22)
copy(ok): sub-402511/label/catROI_sub-402511_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/label/catROI_sub-402511_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/label/catROI_sub-402511_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/it_sub-402511_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/it_sub-402511_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/it_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/it_sub-402511_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/m0wp1sub-402511_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/m0wp1sub-402511_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/m0wp1sub-402511_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/mwp1sub-402511_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/mwp1sub-402511_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/mwp1sub-402511_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/p0sub-402511_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/p0sub-402511_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/p0sub-402511_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/t_sub-402511_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/t_sub-402511_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/t_sub-402511_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/t_sub-402511_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/wp0sub-402511_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/wp0sub-402511_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/mri/wp0sub-402511_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-402511/report/cat_sub-402511_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/report/cat_sub-402511_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/report/cat_sub-402511_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-402511/report/catreport_sub-402511_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-402511/report/catreport_sub-402511_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-402511/report/catreport_sub-402511_acq-standard_T1w.pdf (file) [to catqc_out-storage...]
action summary:
copy (ok: 33)
flock: getting lock took 0.000046 seconds
flock: executing git
SUCCESS